RNA–Protein interactions for RNA: ENST00000475996.1

HLA-F-224, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-224ENST00000475996 FASTKD5Q7L8L6 764 aaKnown RBP14.87□□□□□ -0.03
HLA-F-224ENST00000475996 PROCA1Q8NCQ7 364 aaPredicted RBP14.87□□□□□ -0.03
HLA-F-224ENST00000475996 BRI3BPQ8WY22 251 aa14.87□□□□□ -0.03
HLA-F-224ENST00000475996 CCDC102AQ96A19 550 aa14.87□□□□□ -0.03
HLA-F-224ENST00000475996 KIFC2Q96AC6 838 aa14.87□□□□□ -0.03
HLA-F-224ENST00000475996 DDX11Q96FC9 970 aa14.87□□□□□ -0.03
HLA-F-224ENST00000475996 HHIPL1Q96JK4 782 aa14.87□□□□□ -0.03
HLA-F-224ENST00000475996 SLC26A6Q9BXS9 759 aa14.87□□□□□ -0.03
HLA-F-224ENST00000475996 FEM1BQ9UK73 627 aa14.87□□□□□ -0.03
HLA-F-224ENST00000475996 USP17L15C9J2P7 530 aa14.86□□□□□ -0.03
HLA-F-224ENST00000475996 USP17L13C9JLJ4 530 aa14.86□□□□□ -0.03
HLA-F-224ENST00000475996 USP17L11C9JVI0 530 aa14.86□□□□□ -0.03
HLA-F-224ENST00000475996 USP17L18D6R9N7 530 aa14.86□□□□□ -0.03
HLA-F-224ENST00000475996 USP17L22D6RA61 530 aa14.86□□□□□ -0.03
HLA-F-224ENST00000475996 USP17L17D6RBQ6 530 aa14.86□□□□□ -0.03
HLA-F-224ENST00000475996 USP17L19D6RCP7 530 aa14.86□□□□□ -0.03
HLA-F-224ENST00000475996 USP17L20D6RJB6 530 aa14.86□□□□□ -0.03
HLA-F-224ENST00000475996 FLOT1O75955 427 aa14.86□□□□□ -0.03
HLA-F-224ENST00000475996 SNAP25P60880 206 aa14.86□□□□□ -0.03
HLA-F-224ENST00000475996 USP17L24Q0WX57 530 aa14.86□□□□□ -0.03
HLA-F-224ENST00000475996 GPAT2Q6NUI2 795 aa14.86□□□□□ -0.03
HLA-F-224ENST00000475996 CATSPERGQ6ZRH7 1159 aa14.86□□□□□ -0.03
HLA-F-224ENST00000475996 FAM160B2Q86V87 743 aa14.86□□□□□ -0.03
HLA-F-224ENST00000475996 ADGRF4Q8IZF3 695 aa14.86□□□□□ -0.03
HLA-F-224ENST00000475996 CHURC1Q8WUH1 139 aa14.86□□□□□ -0.03
HLA-F-224ENST00000475996 LZTS2Q9BRK4 669 aa14.86□□□□□ -0.03
HLA-F-224ENST00000475996 AGTPBP1Q9UPW5 1226 aa14.86□□□□□ -0.03
HLA-F-224ENST00000475996 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.86□□□□□ -0.03
HLA-F-224ENST00000475996 PARP14Q460N5 1801 aa14.85□□□□□ -0.03
HLA-F-224ENST00000475996 RASSF10A6NK89 507 aa14.85□□□□□ -0.03
HLA-F-224ENST00000475996 BTBD19C9JJ37 291 aa14.85□□□□□ -0.03
HLA-F-224ENST00000475996 CDKL5O76039 1030 aa14.85□□□□□ -0.03
HLA-F-224ENST00000475996 SSRP1Q08945 709 aaKnown RBP14.85□□□□□ -0.03
HLA-F-224ENST00000475996 BTNL9Q6UXG8 535 aa14.85□□□□□ -0.03
HLA-F-224ENST00000475996 HOMER1Q86YM7 354 aa14.85□□□□□ -0.03
HLA-F-224ENST00000475996 CAPNS2Q96L46 248 aa14.85□□□□□ -0.03
HLA-F-224ENST00000475996 ZIC5Q96T25 663 aa14.85□□□□□ -0.03
HLA-F-224ENST00000475996 SLF1Q9BQI6 1058 aa14.85□□□□□ -0.03
HLA-F-224ENST00000475996 SPZ1Q9BXG8 430 aa14.85□□□□□ -0.03
HLA-F-224ENST00000475996 RIOX1Q9H6W3 641 aa14.85□□□□□ -0.03
HLA-F-224ENST00000475996 ORC3Q9UBD5 711 aaPredicted RBP14.85□□□□□ -0.03
HLA-F-224ENST00000475996 DAXXQ9UER7 740 aaPredicted RBP14.85□□□□□ -0.03
HLA-F-224ENST00000475996 PRR12Q9ULL5 1215 aa14.85□□□□□ -0.03
HLA-F-224ENST00000475996 SMC3Q9UQE7 1217 aa14.85□□□□□ -0.03
HLA-F-224ENST00000475996 RLFQ13129 1914 aa14.85□□□□□ -0.03
HLA-F-224ENST00000475996 MANSC4A6NHS7 340 aaPredicted RBP14.84□□□□□ -0.03
HLA-F-224ENST00000475996 PLA2G6O60733 806 aa14.84□□□□□ -0.03
HLA-F-224ENST00000475996 FMNL1O95466 1100 aaPredicted RBP14.84□□□□□ -0.03
HLA-F-224ENST00000475996 AKAP17AQ02040 695 aaKnown RBP14.84□□□□□ -0.03
HLA-F-224ENST00000475996 SMARCC2Q8TAQ2 1214 aa14.84□□□□□ -0.03
HLA-F-224ENST00000475996 PIGSQ96S52 555 aa14.84□□□□□ -0.03
HLA-F-224ENST00000475996 LLPHQ9BRT6 129 aaKnown RBP14.84□□□□□ -0.03
HLA-F-224ENST00000475996 JMJD4Q9H9V9 463 aa14.84□□□□□ -0.03
HLA-F-224ENST00000475996 PPP1R9AQ9ULJ8 1098 aa14.84□□□□□ -0.03
HLA-F-224ENST00000475996 V9GY48 417 aaPredicted RBP14.84□□□□□ -0.03
HLA-F-224ENST00000475996 AOC2O75106 756 aa14.83□□□□□ -0.04
HLA-F-224ENST00000475996 GJB2P29033 226 aa14.83□□□□□ -0.04
HLA-F-224ENST00000475996 FOSBP53539 338 aa14.83□□□□□ -0.04
HLA-F-224ENST00000475996 IRX3P78415 501 aaPredicted RBP14.83□□□□□ -0.04
HLA-F-224ENST00000475996 TRIM22Q8IYM9 498 aa14.83□□□□□ -0.04
HLA-F-224ENST00000475996 FAM43AQ8N2R8 423 aa14.83□□□□□ -0.04
HLA-F-224ENST00000475996 ATG4CQ96DT6 458 aa14.83□□□□□ -0.04
HLA-F-224ENST00000475996 INTS4Q96HW7 963 aaKnown RBP14.83□□□□□ -0.04
HLA-F-224ENST00000475996 IPO9Q96P70 1041 aaKnown RBP14.83□□□□□ -0.04
HLA-F-224ENST00000475996 PTPN18Q99952 460 aa14.83□□□□□ -0.04
HLA-F-224ENST00000475996 RNF26Q9BY78 433 aaPredicted RBP14.83□□□□□ -0.04
HLA-F-224ENST00000475996 SMCHD1A6NHR9 2005 aa14.82□□□□□ -0.04
HLA-F-224ENST00000475996 PDHXO00330 501 aa14.82□□□□□ -0.04
HLA-F-224ENST00000475996 PRPF3O43395 683 aaKnown RBP14.82□□□□□ -0.04
HLA-F-224ENST00000475996 FDPSP14324 419 aaKnown RBP14.82□□□□□ -0.04
HLA-F-224ENST00000475996 SMARCA1P28370 1054 aa14.82□□□□□ -0.04
HLA-F-224ENST00000475996 HOXA7P31268 230 aaPredicted RBP14.82□□□□□ -0.04
HLA-F-224ENST00000475996 DSG3P32926 999 aa14.82□□□□□ -0.04
HLA-F-224ENST00000475996 HMGN5P82970 282 aaKnown RBP14.82□□□□□ -0.04
HLA-F-224ENST00000475996 KIF23Q02241 960 aaPredicted RBP14.82□□□□□ -0.04
HLA-F-224ENST00000475996 PABPC4Q13310 644 aaKnown RBP eCLIP14.82□□□□□ -0.04
HLA-F-224ENST00000475996 COG2Q14746 738 aa14.82□□□□□ -0.04
HLA-F-224ENST00000475996 CDC37Q16543 378 aaPredicted RBP14.82□□□□□ -0.04
HLA-F-224ENST00000475996 CCDC174Q6PII3 467 aa14.82□□□□□ -0.04
HLA-F-224ENST00000475996 PRPF38AQ8NAV1 312 aaKnown RBP14.82□□□□□ -0.04
HLA-F-224ENST00000475996 FAM184AQ8NB25 1140 aa14.82□□□□□ -0.04
HLA-F-224ENST00000475996 RRP36Q96EU6 259 aaKnown RBP14.82□□□□□ -0.04
HLA-F-224ENST00000475996 AIFM3Q96NN9 605 aa14.82□□□□□ -0.04
HLA-F-224ENST00000475996 P2RX7Q99572 595 aaKnown RBP14.82□□□□□ -0.04
HLA-F-224ENST00000475996 ASCC2Q9H1I8 757 aaPredicted RBP14.82□□□□□ -0.04
HLA-F-224ENST00000475996 RNF216Q9NWF9 866 aaPredicted RBP14.82□□□□□ -0.04
HLA-F-224ENST00000475996 COL11A1P12107 1806 aaPredicted RBP14.82□□□□□ -0.04
HLA-F-224ENST00000475996 TESPA1A2RU30 521 aaPredicted RBP14.82□□□□□ -0.04
HLA-F-224ENST00000475996 SPDYE16A6NNV3 312 aaPredicted RBP14.82□□□□□ -0.04
HLA-F-224ENST00000475996 IGF2BP3O00425 579 aaKnown RBP eCLIP14.82□□□□□ -0.04
HLA-F-224ENST00000475996 TAL1P17542 331 aaPredicted RBP14.82□□□□□ -0.04
HLA-F-224ENST00000475996 OSBPP22059 807 aa14.82□□□□□ -0.04
HLA-F-224ENST00000475996 C1QTNF8P60827 252 aa14.82□□□□□ -0.04
HLA-F-224ENST00000475996 PKN1Q16512 942 aa14.82□□□□□ -0.04
HLA-F-224ENST00000475996 QRICH1Q2TAL8 776 aa14.82□□□□□ -0.04
HLA-F-224ENST00000475996 ANKRD23Q86SG2 305 aa14.82□□□□□ -0.04
HLA-F-224ENST00000475996 MTMR8Q96EF0 704 aa14.82□□□□□ -0.04
HLA-F-224ENST00000475996 SEC63Q9UGP8 760 aaKnown RBP14.82□□□□□ -0.04
HLA-F-224ENST00000475996 CTDP1Q9Y5B0 961 aaPredicted RBP14.82□□□□□ -0.04
HLA-F-224ENST00000475996 STK36Q9NRP7 1315 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms