RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 NBPF3Q9H094 633 aa13.5□□□□□ -0.25
NUDCD3-206ENST00000475952 MROH8Q9H579 483 aa13.5□□□□□ -0.25
NUDCD3-206ENST00000475952 FBXO28Q9NVF7 368 aa13.5□□□□□ -0.25
NUDCD3-206ENST00000475952 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.5□□□□□ -0.25
NUDCD3-206ENST00000475952 LTBP2Q14767 1821 aa13.49□□□□□ -0.25
NUDCD3-206ENST00000475952 STRNO43815 780 aa13.49□□□□□ -0.25
NUDCD3-206ENST00000475952 SLC25A27O95847 323 aa13.49□□□□□ -0.25
NUDCD3-206ENST00000475952 FGAP02671 866 aa13.49□□□□□ -0.25
NUDCD3-206ENST00000475952 HOXC6P09630 235 aa13.49□□□□□ -0.25
NUDCD3-206ENST00000475952 COPB2P35606 906 aa13.49□□□□□ -0.25
NUDCD3-206ENST00000475952 TRIM32Q13049 653 aa13.49□□□□□ -0.25
NUDCD3-206ENST00000475952 CCL14Q16627 93 aa13.49□□□□□ -0.25
NUDCD3-206ENST00000475952 MAP3K21Q5TCX8 1036 aa13.49□□□□□ -0.25
NUDCD3-206ENST00000475952 GMCL1P1Q8NEA9 526 aa13.49□□□□□ -0.25
NUDCD3-206ENST00000475952 MKL1Q969V6 931 aa13.49□□□□□ -0.25
NUDCD3-206ENST00000475952 GUCD1Q96NT3 240 aa13.49□□□□□ -0.25
NUDCD3-206ENST00000475952 UBE2OQ9C0C9 1292 aaKnown RBP13.49□□□□□ -0.25
NUDCD3-206ENST00000475952 C11orf49Q9H6J7 331 aa13.49□□□□□ -0.25
NUDCD3-206ENST00000475952 TOMM22Q9NS69 142 aa13.49□□□□□ -0.25
NUDCD3-206ENST00000475952 SLC5A4Q9NY91 659 aa13.49□□□□□ -0.25
NUDCD3-206ENST00000475952 ADAMTS5Q9UNA0 930 aa13.49□□□□□ -0.25
NUDCD3-206ENST00000475952 STX8Q9UNK0 236 aa13.49□□□□□ -0.25
NUDCD3-206ENST00000475952 PFASO15067 1338 aa13.48□□□□□ -0.25
NUDCD3-206ENST00000475952 VWA5AO00534 786 aa13.48□□□□□ -0.25
NUDCD3-206ENST00000475952 ORC4O43929 436 aa13.48□□□□□ -0.25
NUDCD3-206ENST00000475952 RANBP6O60518 1105 aaKnown RBP13.48□□□□□ -0.25
NUDCD3-206ENST00000475952 ADORA2AP29274 412 aa13.48□□□□□ -0.25
NUDCD3-206ENST00000475952 TMEM132BQ14DG7 1078 aa13.48□□□□□ -0.25
NUDCD3-206ENST00000475952 MFSD14CQ5VZR4 134 aa13.48□□□□□ -0.25
NUDCD3-206ENST00000475952 CWC27Q6UX04 472 aaKnown RBP13.48□□□□□ -0.25
NUDCD3-206ENST00000475952 DPP9Q86TI2 863 aa13.48□□□□□ -0.25
NUDCD3-206ENST00000475952 NUP88Q99567 741 aaPredicted RBP13.48□□□□□ -0.25
NUDCD3-206ENST00000475952 CTDP1Q9Y5B0 961 aaPredicted RBP13.48□□□□□ -0.25
NUDCD3-206ENST00000475952 LCTP09848 1927 aa13.48□□□□□ -0.25
NUDCD3-206ENST00000475952 PCP11498 1178 aaKnown RBP13.47□□□□□ -0.25
NUDCD3-206ENST00000475952 FCER1AP12319 257 aa13.47□□□□□ -0.25
NUDCD3-206ENST00000475952 STAT3P40763 770 aa13.47□□□□□ -0.25
NUDCD3-206ENST00000475952 CACNB2Q08289 660 aaPredicted RBP13.47□□□□□ -0.25
NUDCD3-206ENST00000475952 SLFN13Q68D06 897 aa13.47□□□□□ -0.25
NUDCD3-206ENST00000475952 RIOX2Q8IUF8 465 aa13.47□□□□□ -0.25
NUDCD3-206ENST00000475952 ABRAQ8N0Z2 381 aa13.47□□□□□ -0.25
NUDCD3-206ENST00000475952 PRPF38AQ8NAV1 312 aaKnown RBP13.47□□□□□ -0.25
NUDCD3-206ENST00000475952 TEX13BQ9BXU2 312 aa13.47□□□□□ -0.25
NUDCD3-206ENST00000475952 FEM1BQ9UK73 627 aa13.47□□□□□ -0.25
NUDCD3-206ENST00000475952 ZNF214Q9UL59 606 aaPredicted RBP13.47□□□□□ -0.25
NUDCD3-206ENST00000475952 OGDHLQ9ULD0 1010 aa13.47□□□□□ -0.25
NUDCD3-206ENST00000475952 ISY1Q9ULR0 285 aaKnown RBP13.47□□□□□ -0.25
NUDCD3-206ENST00000475952 FGRP09769 529 aa13.46□□□□□ -0.25
NUDCD3-206ENST00000475952 BMP3P12645 472 aa13.46□□□□□ -0.25
NUDCD3-206ENST00000475952 PDE4AP27815 886 aa13.46□□□□□ -0.25
NUDCD3-206ENST00000475952 STAT2P52630 851 aa13.46□□□□□ -0.25
NUDCD3-206ENST00000475952 HAND2P61296 217 aa13.46□□□□□ -0.25
NUDCD3-206ENST00000475952 KCTD2Q14681 263 aa13.46□□□□□ -0.25
NUDCD3-206ENST00000475952 RRP12Q5JTH9 1297 aaKnown RBP13.46□□□□□ -0.25
NUDCD3-206ENST00000475952 TTC22Q5TAA0 569 aa13.46□□□□□ -0.25
NUDCD3-206ENST00000475952 KIFC2Q96AC6 838 aa13.46□□□□□ -0.25
NUDCD3-206ENST00000475952 MMP19Q99542 508 aa13.46□□□□□ -0.25
NUDCD3-206ENST00000475952 RNF41Q9H4P4 317 aaPredicted RBP13.46□□□□□ -0.25
NUDCD3-206ENST00000475952 LRRC37A2A6NM11 1700 aa13.46□□□□□ -0.25
NUDCD3-206ENST00000475952 POTEB2H3BUK9 544 aa13.45□□□□□ -0.26
NUDCD3-206ENST00000475952 ZBED4O75132 1171 aa13.45□□□□□ -0.26
NUDCD3-206ENST00000475952 FDX1P10109 184 aa13.45□□□□□ -0.26
NUDCD3-206ENST00000475952 CCND3P30281 292 aaPredicted RBP13.45□□□□□ -0.26
NUDCD3-206ENST00000475952 SLC1A4P43007 532 aa13.45□□□□□ -0.26
NUDCD3-206ENST00000475952 AKNAD1Q5T1N1 836 aa13.45□□□□□ -0.26
NUDCD3-206ENST00000475952 OLFML2BQ68BL8 750 aa13.45□□□□□ -0.26
NUDCD3-206ENST00000475952 FAM109BQ6ICB4 259 aaPredicted RBP13.45□□□□□ -0.26
NUDCD3-206ENST00000475952 SNRNP48Q6IEG0 339 aaKnown RBP13.45□□□□□ -0.26
NUDCD3-206ENST00000475952 MFSD6Q6ZSS7 791 aa13.45□□□□□ -0.26
NUDCD3-206ENST00000475952 REPS2Q8NFH8 660 aa13.45□□□□□ -0.26
NUDCD3-206ENST00000475952 NPLOC4Q8TAT6 608 aa13.45□□□□□ -0.26
NUDCD3-206ENST00000475952 STAG1Q8WVM7 1258 aa13.45□□□□□ -0.26
NUDCD3-206ENST00000475952 GMCL1Q96IK5 515 aa13.45□□□□□ -0.26
NUDCD3-206ENST00000475952 INCENPQ9NQS7 918 aa13.45□□□□□ -0.26
NUDCD3-206ENST00000475952 IL17RBQ9NRM6 502 aa13.45□□□□□ -0.26
NUDCD3-206ENST00000475952 FLRT1Q9NZU1 646 aa13.45□□□□□ -0.26
NUDCD3-206ENST00000475952 RAD50Q92878 1312 aa13.44□□□□□ -0.26
NUDCD3-206ENST00000475952 ZNF213O14771 459 aa13.44□□□□□ -0.26
NUDCD3-206ENST00000475952 ATP2A1O14983 1001 aa13.44□□□□□ -0.26
NUDCD3-206ENST00000475952 MSCO60682 206 aa13.44□□□□□ -0.26
NUDCD3-206ENST00000475952 NT5C2P49902 561 aa13.44□□□□□ -0.26
NUDCD3-206ENST00000475952 OAZ1P54368 228 aa13.44□□□□□ -0.26
NUDCD3-206ENST00000475952 IKQ13123 557 aaPredicted RBP13.44□□□□□ -0.26
NUDCD3-206ENST00000475952 FAM160B2Q86V87 743 aa13.44□□□□□ -0.26
NUDCD3-206ENST00000475952 DSCC1Q9BVC3 393 aa13.44□□□□□ -0.26
NUDCD3-206ENST00000475952 TMEM232C9JQI7 657 aa13.43□□□□□ -0.26
NUDCD3-206ENST00000475952 NMT2O60551 498 aa13.43□□□□□ -0.26
NUDCD3-206ENST00000475952 COL6A1P12109 1028 aa13.43□□□□□ -0.26
NUDCD3-206ENST00000475952 GSPT1P15170 499 aaKnown RBP13.43□□□□□ -0.26
NUDCD3-206ENST00000475952 CYP2C19P33261 490 aa13.43□□□□□ -0.26
NUDCD3-206ENST00000475952 MDM2Q00987 491 aaPredicted RBP13.43□□□□□ -0.26
NUDCD3-206ENST00000475952 TBC1D10CQ8IV04 446 aa13.43□□□□□ -0.26
NUDCD3-206ENST00000475952 CPXCR1Q8N123 301 aa13.43□□□□□ -0.26
NUDCD3-206ENST00000475952 CHURC1Q8WUH1 139 aa13.43□□□□□ -0.26
NUDCD3-206ENST00000475952 ESR2Q92731 530 aa13.43□□□□□ -0.26
NUDCD3-206ENST00000475952 MAML3Q96JK9 1138 aa13.43□□□□□ -0.26
NUDCD3-206ENST00000475952 FAM161BQ96MY7 647 aa13.43□□□□□ -0.26
NUDCD3-206ENST00000475952 SLC38A10Q9HBR0 1119 aa13.43□□□□□ -0.26
NUDCD3-206ENST00000475952 TCP11L1Q9NUJ3 509 aa13.43□□□□□ -0.26
NUDCD3-206ENST00000475952 TACC3Q9Y6A5 838 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms