RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 KCNG4Q8TDN1 519 aa15.78■□□□□ 0.12
TRAF4-210ENST00000475329 ACER1Q8TDN7 264 aa15.78■□□□□ 0.12
TRAF4-210ENST00000475329 JMJD4Q9H9V9 463 aa15.78■□□□□ 0.12
TRAF4-210ENST00000475329 PCDHA4Q9UN74 947 aa15.78■□□□□ 0.12
TRAF4-210ENST00000475329 CLIC4Q9Y696 253 aa15.78■□□□□ 0.12
TRAF4-210ENST00000475329 SSC5DA1L4H1 1573 aa15.78■□□□□ 0.12
TRAF4-210ENST00000475329 PNMA6FA0A0J9YX94 578 aa15.77■□□□□ 0.12
TRAF4-210ENST00000475329 BMP3P12645 472 aa15.77■□□□□ 0.12
TRAF4-210ENST00000475329 ECE1P42892 770 aa15.77■□□□□ 0.12
TRAF4-210ENST00000475329 SF3A1Q15459 793 aaKnown RBP15.77■□□□□ 0.12
TRAF4-210ENST00000475329 PPP1R18Q6NYC8 613 aa15.77■□□□□ 0.12
TRAF4-210ENST00000475329 BLIDQ8IZY5 108 aa15.77■□□□□ 0.12
TRAF4-210ENST00000475329 LINC00301Q8NCQ3 95 aa15.77■□□□□ 0.12
TRAF4-210ENST00000475329 TNFRSF25Q93038 417 aa15.77■□□□□ 0.12
TRAF4-210ENST00000475329 DCPSQ96C86 337 aaKnown RBP15.77■□□□□ 0.12
TRAF4-210ENST00000475329 NOL7Q9UMY1 257 aaKnown RBP15.77■□□□□ 0.12
TRAF4-210ENST00000475329 PARP14Q460N5 1801 aa15.77■□□□□ 0.11
TRAF4-210ENST00000475329 ESYT2A0FGR8 921 aa15.76■□□□□ 0.11
TRAF4-210ENST00000475329 SPTLC2O15270 562 aa15.76■□□□□ 0.11
TRAF4-210ENST00000475329 SLC16A2P36021 539 aa15.76■□□□□ 0.11
TRAF4-210ENST00000475329 SUPT20HL1Q3ZLR7 823 aa15.76■□□□□ 0.11
TRAF4-210ENST00000475329 TPRNQ4KMQ1 711 aa15.76■□□□□ 0.11
TRAF4-210ENST00000475329 TYW1BQ6NUM6 668 aa15.76■□□□□ 0.11
TRAF4-210ENST00000475329 USP50Q70EL3 339 aaPredicted RBP15.76■□□□□ 0.11
TRAF4-210ENST00000475329 BICD2Q8TD16 824 aa15.76■□□□□ 0.11
TRAF4-210ENST00000475329 MTMR8Q96EF0 704 aa15.76■□□□□ 0.11
TRAF4-210ENST00000475329 PGBD1Q96JS3 809 aa15.76■□□□□ 0.11
TRAF4-210ENST00000475329 NUP88Q99567 741 aaPredicted RBP15.76■□□□□ 0.11
TRAF4-210ENST00000475329 FEZ1Q99689 392 aa15.76■□□□□ 0.11
TRAF4-210ENST00000475329 VCPKMTQ9H867 229 aa15.76■□□□□ 0.11
TRAF4-210ENST00000475329 C6orf50Q9HD87 102 aa15.76■□□□□ 0.11
TRAF4-210ENST00000475329 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.76■□□□□ 0.11
TRAF4-210ENST00000475329 ZNF112Q9UJU3 913 aa15.76■□□□□ 0.11
TRAF4-210ENST00000475329 GLTPD2A6NH11 291 aa15.75■□□□□ 0.11
TRAF4-210ENST00000475329 USP17L10C9JJH3 530 aa15.75■□□□□ 0.11
TRAF4-210ENST00000475329 ZBTB5O15062 677 aa15.75■□□□□ 0.11
TRAF4-210ENST00000475329 GNA11P29992 359 aa15.75■□□□□ 0.11
TRAF4-210ENST00000475329 EPHX2P34913 555 aa15.75■□□□□ 0.11
TRAF4-210ENST00000475329 ME1P48163 572 aa15.75■□□□□ 0.11
TRAF4-210ENST00000475329 IKQ13123 557 aaPredicted RBP15.75■□□□□ 0.11
TRAF4-210ENST00000475329 SLC39A14Q15043 492 aa15.75■□□□□ 0.11
TRAF4-210ENST00000475329 SYDE2Q5VT97 1194 aa15.75■□□□□ 0.11
TRAF4-210ENST00000475329 BTNL9Q6UXG8 535 aa15.75■□□□□ 0.11
TRAF4-210ENST00000475329 SULF1Q8IWU6 871 aa15.75■□□□□ 0.11
TRAF4-210ENST00000475329 SCYL3Q8IZE3 742 aa15.75■□□□□ 0.11
TRAF4-210ENST00000475329 JMYQ8N9B5 988 aa15.75■□□□□ 0.11
TRAF4-210ENST00000475329 ZMYND12Q9H0C1 365 aa15.75■□□□□ 0.11
TRAF4-210ENST00000475329 CEP131Q9UPN4 1083 aa15.75■□□□□ 0.11
TRAF4-210ENST00000475329 RBBP6Q7Z6E9 1792 aaKnown RBP15.75■□□□□ 0.11
TRAF4-210ENST00000475329 TMEM232C9JQI7 657 aa15.74■□□□□ 0.11
TRAF4-210ENST00000475329 INPP5BP32019 993 aa15.74■□□□□ 0.11
TRAF4-210ENST00000475329 TOB1P50616 345 aaPredicted RBP15.74■□□□□ 0.11
TRAF4-210ENST00000475329 GSE1Q14687 1217 aa15.74■□□□□ 0.11
TRAF4-210ENST00000475329 PTPAQ15257 358 aa15.74■□□□□ 0.11
TRAF4-210ENST00000475329 CDC37Q16543 378 aaPredicted RBP15.74■□□□□ 0.11
TRAF4-210ENST00000475329 PRAMEF18Q5VWM3 479 aa15.74■□□□□ 0.11
TRAF4-210ENST00000475329 SPICE1Q8N0Z3 855 aa15.74■□□□□ 0.11
TRAF4-210ENST00000475329 WRNIP1Q96S55 665 aa15.74■□□□□ 0.11
TRAF4-210ENST00000475329 PICK1Q9NRD5 415 aa15.74■□□□□ 0.11
TRAF4-210ENST00000475329 TMEM63CQ9P1W3 806 aa15.74■□□□□ 0.11
TRAF4-210ENST00000475329 PTPRFP10586 1907 aa15.74■□□□□ 0.11
TRAF4-210ENST00000475329 IQCA1LA6NCM1 817 aa15.73■□□□□ 0.11
TRAF4-210ENST00000475329 FAM205CA6NFA0 338 aa15.73■□□□□ 0.11
TRAF4-210ENST00000475329 SMCO2A6NFE2 343 aa15.73■□□□□ 0.11
TRAF4-210ENST00000475329 TRIM75PA6NK02 468 aa15.73■□□□□ 0.11
TRAF4-210ENST00000475329 PPP6R2O75170 966 aa15.73■□□□□ 0.11
TRAF4-210ENST00000475329 TRAPPC10P48553 1259 aa15.73■□□□□ 0.11
TRAF4-210ENST00000475329 STAT2P52630 851 aa15.73■□□□□ 0.11
TRAF4-210ENST00000475329 ZYXQ15942 572 aaKnown RBP15.73■□□□□ 0.11
TRAF4-210ENST00000475329 QRICH1Q2TAL8 776 aa15.73■□□□□ 0.11
TRAF4-210ENST00000475329 ZSCAN23Q3MJ62 389 aa15.73■□□□□ 0.11
TRAF4-210ENST00000475329 KIAA1755Q5JYT7 1200 aa15.73■□□□□ 0.11
TRAF4-210ENST00000475329 FAM83BQ5T0W9 1011 aa15.73■□□□□ 0.11
TRAF4-210ENST00000475329 CCDC183Q5T5S1 534 aa15.73■□□□□ 0.11
TRAF4-210ENST00000475329 PIK3AP1Q6ZUJ8 805 aa15.73■□□□□ 0.11
TRAF4-210ENST00000475329 CCDC84Q86UT8 332 aaPredicted RBP15.73■□□□□ 0.11
TRAF4-210ENST00000475329 ZC3H15Q8WU90 426 aaKnown RBP15.73■□□□□ 0.11
TRAF4-210ENST00000475329 GLIS2Q9BZE0 524 aaPredicted RBP15.73■□□□□ 0.11
TRAF4-210ENST00000475329 KIAA1683Q9H0B3 1180 aa15.73■□□□□ 0.11
TRAF4-210ENST00000475329 AS3MTQ9HBK9 375 aa15.73■□□□□ 0.11
TRAF4-210ENST00000475329 PCDHA7Q9UN72 937 aa15.73■□□□□ 0.11
TRAF4-210ENST00000475329 MYH7BA7E2Y1 1941 aa15.72■□□□□ 0.11
TRAF4-210ENST00000475329 CCDC194A0A1B0GVG4 234 aa15.72■□□□□ 0.11
TRAF4-210ENST00000475329 A0A1W2PQ27 194 aa15.72■□□□□ 0.11
TRAF4-210ENST00000475329 A0A1W2PQ64 194 aa15.72■□□□□ 0.11
TRAF4-210ENST00000475329 A0A1W2PQD8 194 aa15.72■□□□□ 0.11
TRAF4-210ENST00000475329 M0R2N6 131 aa15.72■□□□□ 0.11
TRAF4-210ENST00000475329 PPP1R11O60927 126 aaPredicted RBP15.72■□□□□ 0.11
TRAF4-210ENST00000475329 BMP15O95972 392 aa15.72■□□□□ 0.11
TRAF4-210ENST00000475329 ADCY7P51828 1080 aa15.72■□□□□ 0.11
TRAF4-210ENST00000475329 EARS2Q5JPH6 523 aaKnown RBP15.72■□□□□ 0.11
TRAF4-210ENST00000475329 TTC38Q5R3I4 469 aa15.72■□□□□ 0.11
TRAF4-210ENST00000475329 NOL9Q5SY16 702 aaKnown RBP15.72■□□□□ 0.11
TRAF4-210ENST00000475329 ADALQ6DHV7 355 aa15.72■□□□□ 0.11
TRAF4-210ENST00000475329 KRT25Q7Z3Z0 450 aa15.72■□□□□ 0.11
TRAF4-210ENST00000475329 FAM160B2Q86V87 743 aa15.72■□□□□ 0.11
TRAF4-210ENST00000475329 CHURC1Q8WUH1 139 aa15.72■□□□□ 0.11
TRAF4-210ENST00000475329 LPAR1Q92633 364 aa15.72■□□□□ 0.11
TRAF4-210ENST00000475329 COA7Q96BR5 231 aa15.72■□□□□ 0.11
TRAF4-210ENST00000475329 PCDHA6Q9UN73 950 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms