RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 NDUFB10O96000 172 aa13.6□□□□□ -0.23
HLA-DOB-208ENST00000475235 FGAP02671 866 aa13.6□□□□□ -0.23
HLA-DOB-208ENST00000475235 HOXC6P09630 235 aa13.6□□□□□ -0.23
HLA-DOB-208ENST00000475235 COPB2P35606 906 aa13.6□□□□□ -0.23
HLA-DOB-208ENST00000475235 PLS1Q14651 629 aa13.6□□□□□ -0.23
HLA-DOB-208ENST00000475235 FAM47AQ5JRC9 791 aa13.6□□□□□ -0.23
HLA-DOB-208ENST00000475235 ZNF589Q86UQ0 364 aaPredicted RBP13.6□□□□□ -0.23
HLA-DOB-208ENST00000475235 GMCL1P1Q8NEA9 526 aa13.6□□□□□ -0.23
HLA-DOB-208ENST00000475235 DEFB118Q96PH6 123 aa13.6□□□□□ -0.23
HLA-DOB-208ENST00000475235 ORC4O43929 436 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 TFRCP02786 760 aaKnown RBP13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 FGRP09769 529 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 PCP11498 1178 aaKnown RBP13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 PRKAR2AP13861 404 aaKnown RBP13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 ERCC3P19447 782 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 ANAPC15P60006 121 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 CTDSPL2Q05D32 466 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 MAP3K21Q5TCX8 1036 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 ABRAQ8N0Z2 381 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 SLF1Q9BQI6 1058 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 FBXO28Q9NVF7 368 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 SLC5A4Q9NY91 659 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 VWA5AO00534 786 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 NT5C2P49902 561 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 TMEM132BQ14DG7 1078 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 MFSD14CQ5VZR4 134 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 CWC27Q6UX04 472 aaKnown RBP13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 DPP9Q86TI2 863 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 NCAPG2Q86XI2 1143 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 LRRC47Q8N1G4 583 aaKnown RBP13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 CEP120Q8N960 986 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 PRPF38AQ8NAV1 312 aaKnown RBP13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 CRISPLD2Q9H0B8 497 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 PRDM16Q9HAZ2 1276 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 STX8Q9UNK0 236 aa13.59□□□□□ -0.23
HLA-DOB-208ENST00000475235 RANBP6O60518 1105 aaKnown RBP13.58□□□□□ -0.24
HLA-DOB-208ENST00000475235 FARP2O94887 1054 aaPredicted RBP13.58□□□□□ -0.24
HLA-DOB-208ENST00000475235 ADORA2AP29274 412 aa13.58□□□□□ -0.24
HLA-DOB-208ENST00000475235 STAT3P40763 770 aa13.58□□□□□ -0.24
HLA-DOB-208ENST00000475235 TRIM32Q13049 653 aa13.58□□□□□ -0.24
HLA-DOB-208ENST00000475235 SLFN13Q68D06 897 aa13.58□□□□□ -0.24
HLA-DOB-208ENST00000475235 UBE2Q1Q7Z7E8 422 aa13.58□□□□□ -0.24
HLA-DOB-208ENST00000475235 RIOX2Q8IUF8 465 aa13.58□□□□□ -0.24
HLA-DOB-208ENST00000475235 ANKLE1Q8NAG6 615 aa13.58□□□□□ -0.24
HLA-DOB-208ENST00000475235 NUP88Q99567 741 aaPredicted RBP13.58□□□□□ -0.24
HLA-DOB-208ENST00000475235 HTATIP2Q9BUP3 242 aa13.58□□□□□ -0.24
HLA-DOB-208ENST00000475235 RNF41Q9H4P4 317 aaPredicted RBP13.58□□□□□ -0.24
HLA-DOB-208ENST00000475235 TOMM22Q9NS69 142 aa13.58□□□□□ -0.24
HLA-DOB-208ENST00000475235 FEM1BQ9UK73 627 aa13.58□□□□□ -0.24
HLA-DOB-208ENST00000475235 TNRC18O15417 2968 aaPredicted RBP13.58□□□□□ -0.24
HLA-DOB-208ENST00000475235 GREB1LQ9C091 1923 aaPredicted RBP13.57□□□□□ -0.24
HLA-DOB-208ENST00000475235 ZBED4O75132 1171 aa13.57□□□□□ -0.24
HLA-DOB-208ENST00000475235 HSP90AA1P07900 732 aaKnown RBP13.57□□□□□ -0.24
HLA-DOB-208ENST00000475235 FDX1P10109 184 aa13.57□□□□□ -0.24
HLA-DOB-208ENST00000475235 FCER1AP12319 257 aa13.57□□□□□ -0.24
HLA-DOB-208ENST00000475235 BMP3P12645 472 aa13.57□□□□□ -0.24
HLA-DOB-208ENST00000475235 PDE4AP27815 886 aa13.57□□□□□ -0.24
HLA-DOB-208ENST00000475235 CACNB2Q08289 660 aaPredicted RBP13.57□□□□□ -0.24
HLA-DOB-208ENST00000475235 CCL14Q16627 93 aa13.57□□□□□ -0.24
HLA-DOB-208ENST00000475235 TTC22Q5TAA0 569 aa13.57□□□□□ -0.24
HLA-DOB-208ENST00000475235 GMCL1Q96IK5 515 aa13.57□□□□□ -0.24
HLA-DOB-208ENST00000475235 TEX13BQ9BXU2 312 aa13.57□□□□□ -0.24
HLA-DOB-208ENST00000475235 ZNF214Q9UL59 606 aaPredicted RBP13.57□□□□□ -0.24
HLA-DOB-208ENST00000475235 CTDP1Q9Y5B0 961 aaPredicted RBP13.57□□□□□ -0.24
HLA-DOB-208ENST00000475235 MYH8P13535 1937 aa13.57□□□□□ -0.24
HLA-DOB-208ENST00000475235 A0A0G2JMZ2 1700 aa13.56□□□□□ -0.24
HLA-DOB-208ENST00000475235 ZNF213O14771 459 aa13.56□□□□□ -0.24
HLA-DOB-208ENST00000475235 AKNAD1Q5T1N1 836 aa13.56□□□□□ -0.24
HLA-DOB-208ENST00000475235 OLFML2BQ68BL8 750 aa13.56□□□□□ -0.24
HLA-DOB-208ENST00000475235 MFSD6Q6ZSS7 791 aa13.56□□□□□ -0.24
HLA-DOB-208ENST00000475235 GPATCH11Q8N954 259 aa13.56□□□□□ -0.24
HLA-DOB-208ENST00000475235 REPS2Q8NFH8 660 aa13.56□□□□□ -0.24
HLA-DOB-208ENST00000475235 DSCC1Q9BVC3 393 aa13.56□□□□□ -0.24
HLA-DOB-208ENST00000475235 IL17RBQ9NRM6 502 aa13.56□□□□□ -0.24
HLA-DOB-208ENST00000475235 ATP2A1O14983 1001 aa13.55□□□□□ -0.24
HLA-DOB-208ENST00000475235 SLC1A4P43007 532 aa13.55□□□□□ -0.24
HLA-DOB-208ENST00000475235 NOVP48745 357 aa13.55□□□□□ -0.24
HLA-DOB-208ENST00000475235 STAT2P52630 851 aa13.55□□□□□ -0.24
HLA-DOB-208ENST00000475235 OAZ1P54368 228 aa13.55□□□□□ -0.24
HLA-DOB-208ENST00000475235 KCTD2Q14681 263 aa13.55□□□□□ -0.24
HLA-DOB-208ENST00000475235 RRP12Q5JTH9 1297 aaKnown RBP13.55□□□□□ -0.24
HLA-DOB-208ENST00000475235 FAM160B2Q86V87 743 aa13.55□□□□□ -0.24
HLA-DOB-208ENST00000475235 NPLOC4Q8TAT6 608 aa13.55□□□□□ -0.24
HLA-DOB-208ENST00000475235 CHURC1Q8WUH1 139 aa13.55□□□□□ -0.24
HLA-DOB-208ENST00000475235 STAG1Q8WVM7 1258 aa13.55□□□□□ -0.24
HLA-DOB-208ENST00000475235 KIFC2Q96AC6 838 aa13.55□□□□□ -0.24
HLA-DOB-208ENST00000475235 MMP19Q99542 508 aa13.55□□□□□ -0.24
HLA-DOB-208ENST00000475235 INCENPQ9NQS7 918 aa13.55□□□□□ -0.24
HLA-DOB-208ENST00000475235 TCP11L1Q9NUJ3 509 aa13.55□□□□□ -0.24
HLA-DOB-208ENST00000475235 CTNNA3Q9UI47 895 aa13.55□□□□□ -0.24
HLA-DOB-208ENST00000475235 ISY1Q9ULR0 285 aaKnown RBP13.55□□□□□ -0.24
HLA-DOB-208ENST00000475235 RAD50Q92878 1312 aa13.55□□□□□ -0.24
HLA-DOB-208ENST00000475235 MSCO60682 206 aa13.54□□□□□ -0.24
HLA-DOB-208ENST00000475235 GSPT1P15170 499 aaKnown RBP13.54□□□□□ -0.24
HLA-DOB-208ENST00000475235 HAND2P61296 217 aa13.54□□□□□ -0.24
HLA-DOB-208ENST00000475235 SNRNP48Q6IEG0 339 aaKnown RBP13.54□□□□□ -0.24
HLA-DOB-208ENST00000475235 NECAB2Q7Z6G3 386 aa13.54□□□□□ -0.24
HLA-DOB-208ENST00000475235 ESR2Q92731 530 aa13.54□□□□□ -0.24
HLA-DOB-208ENST00000475235 SLC38A10Q9HBR0 1119 aa13.54□□□□□ -0.24
HLA-DOB-208ENST00000475235 FLRT1Q9NZU1 646 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms