RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 CLIP2Q9UDT6 1046 aa8.9□□□□□ -0.98
CCDC93-207ENST00000474006 TNKSO95271 1327 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 SH2B2O14492 632 aaPredicted RBP8.89□□□□□ -0.99
CCDC93-207ENST00000474006 ASNSP08243 561 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 EEF2P13639 858 aaKnown RBP8.89□□□□□ -0.99
CCDC93-207ENST00000474006 LIFRP42702 1097 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 NOVP48745 357 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 AK2P54819 239 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 ATP2B2Q01814 1243 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 TOB2Q14106 344 aaPredicted RBP8.89□□□□□ -0.99
CCDC93-207ENST00000474006 WTAPQ15007 396 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 SEC23AQ15436 765 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 LDLRAD1Q5T700 205 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 IFIT1BQ5T764 474 aaKnown RBP8.89□□□□□ -0.99
CCDC93-207ENST00000474006 RCSD1Q6JBY9 416 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 SCYL3Q8IZE3 742 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 ENAHQ8N8S7 591 aaPredicted RBP8.89□□□□□ -0.99
CCDC93-207ENST00000474006 BRF1Q92994 677 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 MKL1Q969V6 931 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 TMEM47Q9BQJ4 181 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 AGXT2Q9BYV1 514 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 LY9Q9HBG7 655 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 GBA2Q9HCG7 927 aaPredicted RBP8.89□□□□□ -0.99
CCDC93-207ENST00000474006 PICK1Q9NRD5 415 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 PLSCR2Q9NRY7 297 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 NYAP2Q9P242 653 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.89□□□□□ -0.99
CCDC93-207ENST00000474006 BRPF3Q9ULD4 1205 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 ZBTB21Q9ULJ3 1066 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 STX8Q9UNK0 236 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 SLC27A5Q9Y2P5 690 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 ZHX2Q9Y6X8 837 aa8.89□□□□□ -0.99
CCDC93-207ENST00000474006 CCDC69A6NI79 296 aa8.88□□□□□ -0.99
CCDC93-207ENST00000474006 USP17L5A8MUK1 530 aa8.88□□□□□ -0.99
CCDC93-207ENST00000474006 CD2BP2O95400 341 aaKnown RBP8.88□□□□□ -0.99
CCDC93-207ENST00000474006 TTLL1O95922 423 aa8.88□□□□□ -0.99
CCDC93-207ENST00000474006 TOP1P11387 765 aaKnown RBP8.88□□□□□ -0.99
CCDC93-207ENST00000474006 PTPRAP18433 802 aa8.88□□□□□ -0.99
CCDC93-207ENST00000474006 FKBP1BP68106 108 aa8.88□□□□□ -0.99
CCDC93-207ENST00000474006 APOBRQ0VD83 1088 aa8.88□□□□□ -0.99
CCDC93-207ENST00000474006 FSTL1Q12841 308 aa8.88□□□□□ -0.99
CCDC93-207ENST00000474006 VGLL4Q14135 290 aa8.88□□□□□ -0.99
CCDC93-207ENST00000474006 ANKRD1Q15327 319 aa8.88□□□□□ -0.99
CCDC93-207ENST00000474006 NOL9Q5SY16 702 aaKnown RBP8.88□□□□□ -0.99
CCDC93-207ENST00000474006 DESI1Q6ICB0 168 aa8.88□□□□□ -0.99
CCDC93-207ENST00000474006 NFXL1Q6ZNB6 911 aa8.88□□□□□ -0.99
CCDC93-207ENST00000474006 NOL8Q76FK4 1167 aaKnown RBP8.88□□□□□ -0.99
CCDC93-207ENST00000474006 CCDC84Q86UT8 332 aaPredicted RBP8.88□□□□□ -0.99
CCDC93-207ENST00000474006 CLEC10AQ8IUN9 316 aa8.88□□□□□ -0.99
CCDC93-207ENST00000474006 ANKRD13AQ8IZ07 590 aa8.88□□□□□ -0.99
CCDC93-207ENST00000474006 PRR7Q8TB68 274 aa8.88□□□□□ -0.99
CCDC93-207ENST00000474006 ACER1Q8TDN7 264 aa8.88□□□□□ -0.99
CCDC93-207ENST00000474006 SLC10A4Q96EP9 437 aa8.88□□□□□ -0.99
CCDC93-207ENST00000474006 HMX1Q9NP08 348 aaPredicted RBP8.88□□□□□ -0.99
CCDC93-207ENST00000474006 TSR3Q9UJK0 312 aaKnown RBP8.88□□□□□ -0.99
CCDC93-207ENST00000474006 CSADQ9Y600 493 aa8.88□□□□□ -0.99
CCDC93-207ENST00000474006 AK9Q5TCS8 1911 aa8.88□□□□□ -0.99
CCDC93-207ENST00000474006 SCN4AP35499 1836 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 SSC5DA1L4H1 1573 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 PASKQ96RG2 1323 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 KLF18A0A0U1RQI7 1052 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 A0A1W2PRG0 241 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 UNCXA6NJT0 531 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 PDIA3P30101 505 aaKnown RBP8.87□□□□□ -0.99
CCDC93-207ENST00000474006 ABL2P42684 1182 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 ECE1P42892 770 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 EVCP57679 992 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 ICA1Q05084 483 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 PUS10Q3MIT2 529 aaKnown RBP8.87□□□□□ -0.99
CCDC93-207ENST00000474006 SYNE3Q6ZMZ3 975 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 CATIPQ7Z7H3 387 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 SGMS1Q86VZ5 419 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 SYMPKQ92797 1274 aaKnown RBP8.87□□□□□ -0.99
CCDC93-207ENST00000474006 SNX21Q969T3 373 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 ZNF274Q96GC6 653 aaPredicted RBP8.87□□□□□ -0.99
CCDC93-207ENST00000474006 CLMNQ96JQ2 1002 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 WDR18Q9BV38 432 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 KAT14Q9H8E8 782 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 ELP3Q9H9T3 547 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 TPCN1Q9ULQ1 816 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 NAP1L2Q9ULW6 460 aaPredicted RBP8.87□□□□□ -0.99
CCDC93-207ENST00000474006 LIMCH1Q9UPQ0 1083 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 HPS5Q9UPZ3 1129 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 AFG3L2Q9Y4W6 797 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 SLC12A7Q9Y666 1083 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 SNCAIPQ9Y6H5 919 aa8.87□□□□□ -0.99
CCDC93-207ENST00000474006 MYH7P12883 1935 aa8.86□□□□□ -0.99
CCDC93-207ENST00000474006 F5H6K3 240 aa8.86□□□□□ -0.99
CCDC93-207ENST00000474006 MCM2P49736 904 aa8.86□□□□□ -0.99
CCDC93-207ENST00000474006 KLRC3Q07444 240 aa8.86□□□□□ -0.99
CCDC93-207ENST00000474006 TROAPQ12815 778 aa8.86□□□□□ -0.99
CCDC93-207ENST00000474006 SPP2Q13103 211 aa8.86□□□□□ -0.99
CCDC93-207ENST00000474006 ME3Q16798 604 aa8.86□□□□□ -0.99
CCDC93-207ENST00000474006 ERO1BQ86YB8 467 aa8.86□□□□□ -0.99
CCDC93-207ENST00000474006 ZNF280CQ8ND82 737 aa8.86□□□□□ -0.99
CCDC93-207ENST00000474006 LRRN4Q8WUT4 740 aa8.86□□□□□ -0.99
CCDC93-207ENST00000474006 CHMP4CQ96CF2 233 aa8.86□□□□□ -0.99
CCDC93-207ENST00000474006 MYL10Q9BUA6 226 aa8.86□□□□□ -0.99
CCDC93-207ENST00000474006 ARHGEF10LQ9HCE6 1279 aa8.86□□□□□ -0.99
CCDC93-207ENST00000474006 TMX2Q9Y320 296 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms