RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 SRSF3P84103 164 aaKnown RBP6.05□□□□□ -1.44
PRPF40A-207ENST00000471701 INTS3Q68E01 1043 aaKnown RBP6.05□□□□□ -1.44
PRPF40A-207ENST00000471701 GALNT18Q6P9A2 607 aa6.05□□□□□ -1.44
PRPF40A-207ENST00000471701 TMEM192Q8IY95 271 aa6.05□□□□□ -1.44
PRPF40A-207ENST00000471701 EAF1Q96JC9 268 aaPredicted RBP6.05□□□□□ -1.44
PRPF40A-207ENST00000471701 SLC6A18Q96N87 628 aa6.05□□□□□ -1.44
PRPF40A-207ENST00000471701 SGPP1Q9BX95 441 aa6.05□□□□□ -1.44
PRPF40A-207ENST00000471701 TMEM82A0PJX8 343 aa6.04□□□□□ -1.44
PRPF40A-207ENST00000471701 WTIPA6NIX2 430 aaPredicted RBP6.04□□□□□ -1.44
PRPF40A-207ENST00000471701 NOTOA8MTQ0 251 aa6.04□□□□□ -1.44
PRPF40A-207ENST00000471701 RFXAPO00287 272 aa6.04□□□□□ -1.44
PRPF40A-207ENST00000471701 TNFRSF10CO14798 259 aa6.04□□□□□ -1.44
PRPF40A-207ENST00000471701 IMPDH2P12268 514 aa6.04□□□□□ -1.44
PRPF40A-207ENST00000471701 ZNF76P36508 570 aa6.04□□□□□ -1.44
PRPF40A-207ENST00000471701 ARL4AP40617 200 aa6.04□□□□□ -1.44
PRPF40A-207ENST00000471701 AUHQ13825 339 aaKnown RBP6.04□□□□□ -1.44
PRPF40A-207ENST00000471701 OLFML2BQ68BL8 750 aa6.04□□□□□ -1.44
PRPF40A-207ENST00000471701 LILRA6Q6PI73 481 aa6.04□□□□□ -1.44
PRPF40A-207ENST00000471701 ZPBP2Q6X784 338 aa6.04□□□□□ -1.44
PRPF40A-207ENST00000471701 CCDC144CPQ8IYA2 1237 aa6.04□□□□□ -1.44
PRPF40A-207ENST00000471701 HHIPL1Q96JK4 782 aa6.04□□□□□ -1.44
PRPF40A-207ENST00000471701 SLC9A7Q96T83 725 aa6.04□□□□□ -1.44
PRPF40A-207ENST00000471701 CDADC1Q9BWV3 514 aa6.04□□□□□ -1.44
PRPF40A-207ENST00000471701 KRTAP4-7Q9BYR0 210 aa6.04□□□□□ -1.44
PRPF40A-207ENST00000471701 GFOD1Q9NXC2 390 aa6.04□□□□□ -1.44
PRPF40A-207ENST00000471701 MEIS3P2A8K0S8 358 aa6.03□□□□□ -1.44
PRPF40A-207ENST00000471701 ABLIM1O14639 778 aa6.03□□□□□ -1.44
PRPF40A-207ENST00000471701 MPOP05164 745 aa6.03□□□□□ -1.44
PRPF40A-207ENST00000471701 BBS9Q3SYG4 887 aa6.03□□□□□ -1.44
PRPF40A-207ENST00000471701 FCRL2Q96LA5 508 aaPredicted RBP6.03□□□□□ -1.44
PRPF40A-207ENST00000471701 FERD3LQ96RJ6 166 aa6.03□□□□□ -1.44
PRPF40A-207ENST00000471701 DSCC1Q9BVC3 393 aa6.03□□□□□ -1.44
PRPF40A-207ENST00000471701 MINPP1Q9UNW1 487 aa6.03□□□□□ -1.44
PRPF40A-207ENST00000471701 KCTD3Q9Y597 815 aa6.03□□□□□ -1.44
PRPF40A-207ENST00000471701 TAF6LQ9Y6J9 622 aa6.03□□□□□ -1.44
PRPF40A-207ENST00000471701 A0A1W2PQ27 194 aa6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 A0A1W2PQ64 194 aa6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 A0A1W2PQC6 194 aa6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 A0A1W2PQD8 194 aa6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 ZBTB7CA1YPR0 619 aa6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 FAM86C2PA6NEL3 165 aa6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 FADS2P1A8MWK0 482 aa6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 HRKO00198 91 aa6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 VAV1P15498 845 aa6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 ZNF16P17020 682 aaPredicted RBP6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 BMP8BP34820 402 aa6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 LAPTM5Q13571 262 aa6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 NOL9Q5SY16 702 aaKnown RBP6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 TMCO4Q5TGY1 634 aa6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 FBXW10Q5XX13 1052 aa6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 CWF19L1Q69YN2 538 aaKnown RBP6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 USP48Q86UV5 1035 aa6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 TMEM151BQ8IW70 566 aa6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 C7orf61Q8IZ16 206 aa6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 BACH2Q9BYV9 841 aa6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 GCM1Q9NP62 436 aa6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 PRR13Q9NZ81 148 aa6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 SUCOQ9UBS9 1254 aaKnown RBP6.02□□□□□ -1.45
PRPF40A-207ENST00000471701 A0A1W2PQ45 241 aaPredicted RBP6.01□□□□□ -1.45
PRPF40A-207ENST00000471701 A0A1W2PQY0 241 aa6.01□□□□□ -1.45
PRPF40A-207ENST00000471701 GSNP06396 782 aa6.01□□□□□ -1.45
PRPF40A-207ENST00000471701 NOP2P46087 812 aaKnown RBP6.01□□□□□ -1.45
PRPF40A-207ENST00000471701 CYP4F8P98187 520 aa6.01□□□□□ -1.45
PRPF40A-207ENST00000471701 TMEM62Q0P6H9 643 aa6.01□□□□□ -1.45
PRPF40A-207ENST00000471701 LCE4AQ5TA78 99 aa6.01□□□□□ -1.45
PRPF40A-207ENST00000471701 TCERG1LQ5VWI1 586 aa6.01□□□□□ -1.45
PRPF40A-207ENST00000471701 TTLL10Q6ZVT0 673 aa6.01□□□□□ -1.45
PRPF40A-207ENST00000471701 RAPGEFL1Q9UHV5 662 aa6.01□□□□□ -1.45
PRPF40A-207ENST00000471701 IRAK3Q9Y616 596 aa6.01□□□□□ -1.45
PRPF40A-207ENST00000471701 INHBBP09529 407 aa6□□□□□ -1.45
PRPF40A-207ENST00000471701 PRKCAP17252 672 aa6□□□□□ -1.45
PRPF40A-207ENST00000471701 BMP7P18075 431 aa6□□□□□ -1.45
PRPF40A-207ENST00000471701 SDHBP21912 280 aa6□□□□□ -1.45
PRPF40A-207ENST00000471701 VIPR1P32241 457 aa6□□□□□ -1.45
PRPF40A-207ENST00000471701 HSF5Q4G112 596 aaPredicted RBP6□□□□□ -1.45
PRPF40A-207ENST00000471701 NAT16Q8N8M0 369 aa6□□□□□ -1.45
PRPF40A-207ENST00000471701 SMARCC1Q92922 1105 aaPredicted RBP6□□□□□ -1.45
PRPF40A-207ENST00000471701 SIGLEC10Q96LC7 697 aa6□□□□□ -1.45
PRPF40A-207ENST00000471701 TM9SF2Q99805 663 aa6□□□□□ -1.45
PRPF40A-207ENST00000471701 PLCD4Q9BRC7 762 aa6□□□□□ -1.45
PRPF40A-207ENST00000471701 ZCCHC4Q9H5U6 513 aa6□□□□□ -1.45
PRPF40A-207ENST00000471701 METTL5Q9NRN9 209 aaKnown RBP6□□□□□ -1.45
PRPF40A-207ENST00000471701 AP5S1Q9NUS5 200 aa6□□□□□ -1.45
PRPF40A-207ENST00000471701 MBD1Q9UIS9 605 aaPredicted RBP6□□□□□ -1.45
PRPF40A-207ENST00000471701 ZNRF3Q9ULT6 936 aa6□□□□□ -1.45
PRPF40A-207ENST00000471701 ZNF205O95201 554 aa5.99□□□□□ -1.45
PRPF40A-207ENST00000471701 GSTM1P09488 218 aa5.99□□□□□ -1.45
PRPF40A-207ENST00000471701 PMS1P54277 932 aaKnown RBP5.99□□□□□ -1.45
PRPF40A-207ENST00000471701 ERVFRD-1P60508 538 aa5.99□□□□□ -1.45
PRPF40A-207ENST00000471701 YBX1P67809 324 aaKnown RBP5.99□□□□□ -1.45
PRPF40A-207ENST00000471701 ANKRD39Q53RE8 183 aa5.99□□□□□ -1.45
PRPF40A-207ENST00000471701 HLA-DQA1Q5Y7H0 255 aa5.99□□□□□ -1.45
PRPF40A-207ENST00000471701 RGS22Q8NE09 1264 aa5.99□□□□□ -1.45
PRPF40A-207ENST00000471701 NUP43Q8NFH3 380 aa5.99□□□□□ -1.45
PRPF40A-207ENST00000471701 RNF34Q969K3 372 aa5.99□□□□□ -1.45
PRPF40A-207ENST00000471701 CRBNQ96SW2 442 aa5.99□□□□□ -1.45
PRPF40A-207ENST00000471701 ERVK13-1Q9NX77 482 aa5.99□□□□□ -1.45
PRPF40A-207ENST00000471701 GPR55Q9Y2T6 319 aaPredicted RBP5.99□□□□□ -1.45
PRPF40A-207ENST00000471701 A0A1W2PQJ5 194 aa5.98□□□□□ -1.45
PRPF40A-207ENST00000471701 C9IYK1 514 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms