RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 GTF2IRD2BQ6EKJ0 949 aa8.94□□□□□ -0.98
SMC5-202ENST00000471372 POMZP3Q6PJE2 187 aa8.94□□□□□ -0.98
SMC5-202ENST00000471372 GTF2IRD2Q86UP8 949 aa8.94□□□□□ -0.98
SMC5-202ENST00000471372 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.94□□□□□ -0.98
SMC5-202ENST00000471372 SMYD4Q8IYR2 804 aaPredicted RBP8.94□□□□□ -0.98
SMC5-202ENST00000471372 C12orf50Q8NA57 414 aaPredicted RBP8.94□□□□□ -0.98
SMC5-202ENST00000471372 CCDC136Q96JN2 1154 aa8.94□□□□□ -0.98
SMC5-202ENST00000471372 LOC100996750A0A140TA64 210 aa8.93□□□□□ -0.98
SMC5-202ENST00000471372 EFCAB14O75071 495 aa8.93□□□□□ -0.98
SMC5-202ENST00000471372 RASGRP1O95267 797 aa8.93□□□□□ -0.98
SMC5-202ENST00000471372 ASLP04424 464 aa8.93□□□□□ -0.98
SMC5-202ENST00000471372 JMJD7P0C870 316 aa8.93□□□□□ -0.98
SMC5-202ENST00000471372 GFRA1P56159 465 aa8.93□□□□□ -0.98
SMC5-202ENST00000471372 PPP2R5DQ14738 602 aa8.93□□□□□ -0.98
SMC5-202ENST00000471372 STAT4Q14765 748 aa8.93□□□□□ -0.98
SMC5-202ENST00000471372 PPP2R5AQ15172 486 aa8.93□□□□□ -0.98
SMC5-202ENST00000471372 FMR1NBQ8N0W7 255 aaPredicted RBP8.93□□□□□ -0.98
SMC5-202ENST00000471372 MFSD2AQ8NA29 543 aa8.93□□□□□ -0.98
SMC5-202ENST00000471372 DCAF11Q8TEB1 546 aa8.93□□□□□ -0.98
SMC5-202ENST00000471372 WHAMMQ8TF30 809 aa8.93□□□□□ -0.98
SMC5-202ENST00000471372 PSMD1Q99460 953 aa8.93□□□□□ -0.98
SMC5-202ENST00000471372 SMAD5Q99717 465 aaKnown RBP8.93□□□□□ -0.98
SMC5-202ENST00000471372 KRTAP4-6Q9BYQ5 205 aa8.93□□□□□ -0.98
SMC5-202ENST00000471372 CCDC8Q9H0W5 538 aaPredicted RBP8.93□□□□□ -0.98
SMC5-202ENST00000471372 NOL6Q9H6R4 1146 aaKnown RBP8.93□□□□□ -0.98
SMC5-202ENST00000471372 GEMIN8Q9NWZ8 242 aaKnown RBP8.93□□□□□ -0.98
SMC5-202ENST00000471372 SLC5A4Q9NY91 659 aa8.93□□□□□ -0.98
SMC5-202ENST00000471372 FBXL21Q9UKT6 434 aa8.93□□□□□ -0.98
SMC5-202ENST00000471372 A0A0A0MRY4 1105 aa8.92□□□□□ -0.98
SMC5-202ENST00000471372 LOC102724159A0A0B4J2E5 919 aa8.92□□□□□ -0.98
SMC5-202ENST00000471372 SHTN1A0MZ66 631 aa8.92□□□□□ -0.98
SMC5-202ENST00000471372 PLEKHD1A6NEE1 506 aa8.92□□□□□ -0.98
SMC5-202ENST00000471372 GPR39O43194 453 aa8.92□□□□□ -0.98
SMC5-202ENST00000471372 RNF4P78317 190 aa8.92□□□□□ -0.98
SMC5-202ENST00000471372 PWP2Q15269 919 aaKnown RBP8.92□□□□□ -0.98
SMC5-202ENST00000471372 DHCR24Q15392 516 aa8.92□□□□□ -0.98
SMC5-202ENST00000471372 NOL9Q5SY16 702 aaKnown RBP8.92□□□□□ -0.98
SMC5-202ENST00000471372 NECAB2Q7Z6G3 386 aa8.92□□□□□ -0.98
SMC5-202ENST00000471372 CDH24Q86UP0 819 aa8.92□□□□□ -0.98
SMC5-202ENST00000471372 CRACR2BQ8N4Y2 399 aaPredicted RBP8.92□□□□□ -0.98
SMC5-202ENST00000471372 TMEM145Q8NBT3 493 aa8.92□□□□□ -0.98
SMC5-202ENST00000471372 C2CD4AQ8NCU7 369 aaPredicted RBP8.92□□□□□ -0.98
SMC5-202ENST00000471372 KCTD13Q8WZ19 329 aa8.92□□□□□ -0.98
SMC5-202ENST00000471372 PTPRN2Q92932 1015 aa8.92□□□□□ -0.98
SMC5-202ENST00000471372 MTMR8Q96EF0 704 aa8.92□□□□□ -0.98
SMC5-202ENST00000471372 MIPEPQ99797 713 aa8.92□□□□□ -0.98
SMC5-202ENST00000471372 TRAF6Q9Y4K3 522 aa8.92□□□□□ -0.98
SMC5-202ENST00000471372 NPTXRO95502 500 aa8.91□□□□□ -0.98
SMC5-202ENST00000471372 BCRP11274 1271 aa8.91□□□□□ -0.98
SMC5-202ENST00000471372 IGFALSP35858 605 aa8.91□□□□□ -0.98
SMC5-202ENST00000471372 KCNJ6P48051 423 aa8.91□□□□□ -0.98
SMC5-202ENST00000471372 DGKGP49619 791 aa8.91□□□□□ -0.98
SMC5-202ENST00000471372 RAB27AP51159 221 aa8.91□□□□□ -0.98
SMC5-202ENST00000471372 ITKQ08881 620 aa8.91□□□□□ -0.98
SMC5-202ENST00000471372 SNW1Q13573 536 aaKnown RBP8.91□□□□□ -0.98
SMC5-202ENST00000471372 PRSS53Q2L4Q9 553 aa8.91□□□□□ -0.98
SMC5-202ENST00000471372 RNF219Q5W0B1 726 aaPredicted RBP8.91□□□□□ -0.98
SMC5-202ENST00000471372 LETMD1Q6P1Q0 360 aa8.91□□□□□ -0.98
SMC5-202ENST00000471372 TRIM8Q9BZR9 551 aa8.91□□□□□ -0.98
SMC5-202ENST00000471372 PCDHB12Q9Y5F1 795 aa8.91□□□□□ -0.98
SMC5-202ENST00000471372 ASXL2Q76L83 1435 aa8.9□□□□□ -0.98
SMC5-202ENST00000471372 A0A087WZG4 1122 aa8.9□□□□□ -0.98
SMC5-202ENST00000471372 TCRBV16S1A1N1A0A5B0 115 aa8.9□□□□□ -0.98
SMC5-202ENST00000471372 SLITRK5O94991 958 aa8.9□□□□□ -0.98
SMC5-202ENST00000471372 SCGB1D2O95969 90 aa8.9□□□□□ -0.98
SMC5-202ENST00000471372 SNRPB2P08579 225 aaKnown RBP8.9□□□□□ -0.98
SMC5-202ENST00000471372 HOXB4P17483 251 aaPredicted RBP8.9□□□□□ -0.98
SMC5-202ENST00000471372 NEK2P51955 445 aa8.9□□□□□ -0.98
SMC5-202ENST00000471372 MAP4K2Q12851 820 aa8.9□□□□□ -0.98
SMC5-202ENST00000471372 NBPF9Q3BBW0 867 aa8.9□□□□□ -0.98
SMC5-202ENST00000471372 CFAP100Q494V2 611 aa8.9□□□□□ -0.98
SMC5-202ENST00000471372 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.9□□□□□ -0.98
SMC5-202ENST00000471372 C1orf159Q96HA4 380 aa8.9□□□□□ -0.98
SMC5-202ENST00000471372 MAGEB10Q96LZ2 347 aaPredicted RBP8.9□□□□□ -0.98
SMC5-202ENST00000471372 PRDM14Q9GZV8 571 aa8.9□□□□□ -0.98
SMC5-202ENST00000471372 NKX2-4Q9H2Z4 354 aa8.9□□□□□ -0.98
SMC5-202ENST00000471372 PCOLCE2Q9UKZ9 415 aa8.9□□□□□ -0.98
SMC5-202ENST00000471372 FHOD1Q9Y613 1164 aa8.9□□□□□ -0.98
SMC5-202ENST00000471372 VAMP4O75379 141 aa8.89□□□□□ -0.99
SMC5-202ENST00000471372 ARHGEF15O94989 841 aa8.89□□□□□ -0.99
SMC5-202ENST00000471372 HOXC12P31275 282 aa8.89□□□□□ -0.99
SMC5-202ENST00000471372 ECI1P42126 302 aa8.89□□□□□ -0.99
SMC5-202ENST00000471372 ID4P47928 161 aa8.89□□□□□ -0.99
SMC5-202ENST00000471372 CYP4F3Q08477 520 aa8.89□□□□□ -0.99
SMC5-202ENST00000471372 SKOR2Q2VWA4 1001 aaPredicted RBP8.89□□□□□ -0.99
SMC5-202ENST00000471372 SLC35F1Q5T1Q4 408 aa8.89□□□□□ -0.99
SMC5-202ENST00000471372 CDCA2Q69YH5 1023 aaPredicted RBP8.89□□□□□ -0.99
SMC5-202ENST00000471372 FDX2Q6P4F2 183 aa8.89□□□□□ -0.99
SMC5-202ENST00000471372 CCAR1Q8IX12 1150 aaKnown RBP8.89□□□□□ -0.99
SMC5-202ENST00000471372 AGGF1Q8N302 714 aaeCLIP8.89□□□□□ -0.99
SMC5-202ENST00000471372 FIBCD1Q8N539 461 aa8.89□□□□□ -0.99
SMC5-202ENST00000471372 SYTL5Q8TDW5 730 aaPredicted RBP8.89□□□□□ -0.99
SMC5-202ENST00000471372 COG1Q8WTW3 980 aa8.89□□□□□ -0.99
SMC5-202ENST00000471372 PMM1Q92871 262 aa8.89□□□□□ -0.99
SMC5-202ENST00000471372 GPR55Q9Y2T6 319 aaPredicted RBP8.89□□□□□ -0.99
SMC5-202ENST00000471372 NEMP1O14524 444 aa8.88□□□□□ -0.99
SMC5-202ENST00000471372 AKAP10O43572 662 aa8.88□□□□□ -0.99
SMC5-202ENST00000471372 BRINP1O60477 761 aa8.88□□□□□ -0.99
SMC5-202ENST00000471372 LRRN2O75325 713 aa8.88□□□□□ -0.99
SMC5-202ENST00000471372 CRTAMO95727 393 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms