RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 BTBD19C9JJ37 291 aa33.53■■■□□ 2.96
SOD1-203ENST00000470944 USP17L13C9JLJ4 530 aa33.53■■■□□ 2.96
SOD1-203ENST00000470944 USP17L11C9JVI0 530 aa33.53■■■□□ 2.96
SOD1-203ENST00000470944 USP17L18D6R9N7 530 aa33.53■■■□□ 2.96
SOD1-203ENST00000470944 USP17L22D6RA61 530 aa33.53■■■□□ 2.96
SOD1-203ENST00000470944 USP17L17D6RBQ6 530 aa33.53■■■□□ 2.96
SOD1-203ENST00000470944 USP17L19D6RCP7 530 aa33.53■■■□□ 2.96
SOD1-203ENST00000470944 USP17L20D6RJB6 530 aa33.53■■■□□ 2.96
SOD1-203ENST00000470944 FLOT1O75955 427 aa33.53■■■□□ 2.96
SOD1-203ENST00000470944 C1QTNF8P60827 252 aa33.53■■■□□ 2.96
SOD1-203ENST00000470944 USP17L24Q0WX57 530 aa33.53■■■□□ 2.96
SOD1-203ENST00000470944 ADGRF4Q8IZF3 695 aa33.53■■■□□ 2.96
SOD1-203ENST00000470944 PIBF1Q8WXW3 757 aa33.53■■■□□ 2.96
SOD1-203ENST00000470944 LZTS2Q9BRK4 669 aa33.53■■■□□ 2.96
SOD1-203ENST00000470944 hCG_1642624A0A1W2PR95 340 aa33.52■■■□□ 2.96
SOD1-203ENST00000470944 TESPA1A2RU30 521 aaPredicted RBP33.52■■■□□ 2.96
SOD1-203ENST00000470944 HOXA7P31268 230 aaPredicted RBP33.52■■■□□ 2.96
SOD1-203ENST00000470944 KIFC2Q96AC6 838 aa33.52■■■□□ 2.96
SOD1-203ENST00000470944 PRR12Q9ULL5 1215 aa33.52■■■□□ 2.96
SOD1-203ENST00000470944 MANSC4A6NHS7 340 aaPredicted RBP33.51■■■□□ 2.96
SOD1-203ENST00000470944 PLA2G6O60733 806 aa33.51■■■□□ 2.96
SOD1-203ENST00000470944 SYDE2Q5VT97 1194 aa33.51■■■□□ 2.96
SOD1-203ENST00000470944 FAM43AQ8N2R8 423 aa33.51■■■□□ 2.96
SOD1-203ENST00000470944 SPRYD3Q8NCJ5 442 aa33.51■■■□□ 2.96
SOD1-203ENST00000470944 SLF1Q9BQI6 1058 aa33.51■■■□□ 2.96
SOD1-203ENST00000470944 SPZ1Q9BXG8 430 aa33.51■■■□□ 2.96
SOD1-203ENST00000470944 RIOX1Q9H6W3 641 aa33.51■■■□□ 2.96
SOD1-203ENST00000470944 JMJD4Q9H9V9 463 aa33.51■■■□□ 2.96
SOD1-203ENST00000470944 PTPDC1A2A3K4 754 aa33.5■■■□□ 2.95
SOD1-203ENST00000470944 AOC2O75106 756 aa33.5■■■□□ 2.95
SOD1-203ENST00000470944 SNAP25P60880 206 aa33.5■■■□□ 2.95
SOD1-203ENST00000470944 CHURC1Q8WUH1 139 aa33.5■■■□□ 2.95
SOD1-203ENST00000470944 CPLX2Q6PUV4 134 aaKnown RBP33.5■■■□□ 2.95
SOD1-203ENST00000470944 FAM160B2Q86V87 743 aa33.5■■■□□ 2.95
SOD1-203ENST00000470944 DDX11Q96FC9 970 aa33.5■■■□□ 2.95
SOD1-203ENST00000470944 SLC26A6Q9BXS9 759 aa33.5■■■□□ 2.95
SOD1-203ENST00000470944 SMARCA1P28370 1054 aa33.49■■■□□ 2.95
SOD1-203ENST00000470944 KIF23Q02241 960 aaPredicted RBP33.49■■■□□ 2.95
SOD1-203ENST00000470944 SMARCC2Q8TAQ2 1214 aa33.49■■■□□ 2.95
SOD1-203ENST00000470944 LLPHQ9BRT6 129 aaKnown RBP33.49■■■□□ 2.95
SOD1-203ENST00000470944 ASCC2Q9H1I8 757 aaPredicted RBP33.49■■■□□ 2.95
SOD1-203ENST00000470944 PPP1R9AQ9ULJ8 1098 aa33.49■■■□□ 2.95
SOD1-203ENST00000470944 V9GY48 417 aaPredicted RBP33.49■■■□□ 2.95
SOD1-203ENST00000470944 COG2Q14746 738 aa33.48■■■□□ 2.95
SOD1-203ENST00000470944 ANKRD23Q86SG2 305 aa33.48■■■□□ 2.95
SOD1-203ENST00000470944 PRPF38AQ8NAV1 312 aaKnown RBP33.48■■■□□ 2.95
SOD1-203ENST00000470944 PIGSQ96S52 555 aa33.48■■■□□ 2.95
SOD1-203ENST00000470944 PDHXO00330 501 aa33.48■■■□□ 2.95
SOD1-203ENST00000470944 IGF2BP3O00425 579 aaKnown RBP eCLIP33.48■■■□□ 2.95
SOD1-203ENST00000470944 CDKL5O76039 1030 aa33.48■■■□□ 2.95
SOD1-203ENST00000470944 FMNL1O95466 1100 aaPredicted RBP33.48■■■□□ 2.95
SOD1-203ENST00000470944 FDPSP14324 419 aaKnown RBP33.48■■■□□ 2.95
SOD1-203ENST00000470944 HOMER1Q86YM7 354 aa33.48■■■□□ 2.95
SOD1-203ENST00000470944 ATG4CQ96DT6 458 aa33.48■■■□□ 2.95
SOD1-203ENST00000470944 BAZ2BQ9UIF8 2168 aaKnown RBP33.47■■■□□ 2.95
SOD1-203ENST00000470944 DSG3P32926 999 aa33.47■■■□□ 2.95
SOD1-203ENST00000470944 NOGQ13253 232 aa33.47■■■□□ 2.95
SOD1-203ENST00000470944 P2RX7Q99572 595 aaKnown RBP33.47■■■□□ 2.95
SOD1-203ENST00000470944 RLFQ13129 1914 aa33.47■■■□□ 2.95
SOD1-203ENST00000470944 HSPA6P17066 643 aa33.46■■■□□ 2.95
SOD1-203ENST00000470944 POTEEQ6S8J3 1075 aa33.46■■■□□ 2.95
SOD1-203ENST00000470944 MTMR8Q96EF0 704 aa33.46■■■□□ 2.95
SOD1-203ENST00000470944 INTS4Q96HW7 963 aaKnown RBP33.46■■■□□ 2.95
SOD1-203ENST00000470944 RNF26Q9BY78 433 aaPredicted RBP33.46■■■□□ 2.95
SOD1-203ENST00000470944 SPDYE16A6NNV3 312 aaPredicted RBP33.45■■■□□ 2.95
SOD1-203ENST00000470944 VEGFBP49765 207 aa33.45■■■□□ 2.95
SOD1-203ENST00000470944 IRX3P78415 501 aaPredicted RBP33.45■■■□□ 2.95
SOD1-203ENST00000470944 SSRP1Q08945 709 aaKnown RBP33.45■■■□□ 2.95
SOD1-203ENST00000470944 ZSCAN21Q9Y5A6 473 aaPredicted RBP33.45■■■□□ 2.95
SOD1-203ENST00000470944 WDR33Q9C0J8 1336 aaKnown RBP33.45■■■□□ 2.95
SOD1-203ENST00000470944 PARP14Q460N5 1801 aa33.45■■■□□ 2.94
SOD1-203ENST00000470944 PRPF3O43395 683 aaKnown RBP33.45■■■□□ 2.94
SOD1-203ENST00000470944 HSP90AA1P07900 732 aaKnown RBP33.45■■■□□ 2.94
SOD1-203ENST00000470944 CYP2C8P10632 490 aa33.45■■■□□ 2.94
SOD1-203ENST00000470944 PABPC4Q13310 644 aaKnown RBP eCLIP33.45■■■□□ 2.944e-8■□□□□ 11.3
SOD1-203ENST00000470944 PKN1Q16512 942 aa33.44■■■□□ 2.94
SOD1-203ENST00000470944 CDC37Q16543 378 aaPredicted RBP33.44■■■□□ 2.94
SOD1-203ENST00000470944 ORC3Q9UBD5 711 aaPredicted RBP33.44■■■□□ 2.94
SOD1-203ENST00000470944 INHBEP58166 350 aa33.43■■■□□ 2.94
SOD1-203ENST00000470944 IFNL1Q8IU54 200 aa33.43■■■□□ 2.94
SOD1-203ENST00000470944 TRIM22Q8IYM9 498 aa33.43■■■□□ 2.94
SOD1-203ENST00000470944 RRP36Q96EU6 259 aaKnown RBP33.43■■■□□ 2.94
SOD1-203ENST00000470944 RANBP17Q9H2T7 1088 aaKnown RBP33.43■■■□□ 2.94
SOD1-203ENST00000470944 HOXC10Q9NYD6 342 aa33.43■■■□□ 2.94
SOD1-203ENST00000470944 ADAMTS5Q9UNA0 930 aa33.43■■■□□ 2.94
SOD1-203ENST00000470944 SMC3Q9UQE7 1217 aa33.43■■■□□ 2.94
SOD1-203ENST00000470944 SLC45A1Q9Y2W3 748 aa33.43■■■□□ 2.94
SOD1-203ENST00000470944 VWA5AO00534 786 aa33.42■■■□□ 2.94
SOD1-203ENST00000470944 PPP1R11O60927 126 aaPredicted RBP33.42■■■□□ 2.94
SOD1-203ENST00000470944 OSBPP22059 807 aa33.42■■■□□ 2.94
SOD1-203ENST00000470944 SREBF2Q12772 1141 aa33.42■■■□□ 2.94
SOD1-203ENST00000470944 QRICH1Q2TAL8 776 aa33.42■■■□□ 2.94
SOD1-203ENST00000470944 AIFM3Q96NN9 605 aa33.42■■■□□ 2.94
SOD1-203ENST00000470944 PEX10O60683 326 aa33.42■■■□□ 2.94
SOD1-203ENST00000470944 GJB2P29033 226 aa33.42■■■□□ 2.94
SOD1-203ENST00000470944 TM4SF4P48230 202 aa33.42■■■□□ 2.94
SOD1-203ENST00000470944 HERVK_113P62684 666 aa33.42■■■□□ 2.94
SOD1-203ENST00000470944 SLC38A10Q9HBR0 1119 aa33.42■■■□□ 2.94
SOD1-203ENST00000470944 STK36Q9NRP7 1315 aa33.41■■■□□ 2.94
SOD1-203ENST00000470944 PCNTO95613 3336 aa33.41■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms