RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 ESR2Q92731 530 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 RASSF4Q9H2L5 321 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 RNF41Q9H4P4 317 aaPredicted RBP11.59□□□□□ -0.55
SMC4-210ENST00000469762 FAM204AQ9H8W3 233 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 RNF216Q9NWF9 866 aaPredicted RBP11.59□□□□□ -0.55
SMC4-210ENST00000469762 HPCAL4Q9UM19 191 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 CASZ1Q86V15 1759 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 NOP2P46087 812 aaKnown RBP11.59□□□□□ -0.55
SMC4-210ENST00000469762 PPP2R5BQ15173 497 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 PIK3AP1Q6ZUJ8 805 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 CADPS2Q86UW7 1296 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 TSPYL1Q9H0U9 437 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 PLEKHA4Q9H4M7 779 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 ZNF804BA4D1E1 1349 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 ERVV-1B6SEH8 477 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 ZNF185O15231 689 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 ZMYND10O75800 440 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 KLK7P49862 253 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 TUBB4BP68371 445 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 UBXN1Q04323 297 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 MEA1Q16626 185 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 AGPAT5Q9NUQ2 364 aa11.59□□□□□ -0.55
SMC4-210ENST00000469762 MCM7P33993 719 aa11.58□□□□□ -0.56
SMC4-210ENST00000469762 DZIP3Q86Y13 1208 aaKnown RBP11.58□□□□□ -0.56
SMC4-210ENST00000469762 GSPT2Q8IYD1 628 aaKnown RBP11.58□□□□□ -0.56
SMC4-210ENST00000469762 RSPH14Q9UHP6 348 aa11.58□□□□□ -0.56
SMC4-210ENST00000469762 SCN7AQ01118 1682 aa11.58□□□□□ -0.56
SMC4-210ENST00000469762 PP2D1A8MPX8 630 aa11.58□□□□□ -0.56
SMC4-210ENST00000469762 ZNF263O14978 683 aa11.58□□□□□ -0.56
SMC4-210ENST00000469762 RNF40O75150 1001 aa11.58□□□□□ -0.56
SMC4-210ENST00000469762 CTR9Q6PD62 1173 aa11.58□□□□□ -0.56
SMC4-210ENST00000469762 LRP2BPQ9P2M1 347 aa11.58□□□□□ -0.56
SMC4-210ENST00000469762 CAPN11Q9UMQ6 739 aa11.58□□□□□ -0.56
SMC4-210ENST00000469762 LAMB2P55268 1798 aa11.58□□□□□ -0.56
SMC4-210ENST00000469762 KIAA1551Q9HCM1 1747 aa11.58□□□□□ -0.56
SMC4-210ENST00000469762 MYH1P12882 1939 aa11.58□□□□□ -0.56
SMC4-210ENST00000469762 LGALS16A8MUM7 142 aa11.58□□□□□ -0.56
SMC4-210ENST00000469762 ANKRD65E5RJM6 399 aa11.58□□□□□ -0.56
SMC4-210ENST00000469762 M0R2N6 131 aa11.58□□□□□ -0.56
SMC4-210ENST00000469762 IFIT1BQ5T764 474 aaKnown RBP11.58□□□□□ -0.56
SMC4-210ENST00000469762 TYW1BQ6NUM6 668 aa11.58□□□□□ -0.56
SMC4-210ENST00000469762 CCDC102AQ96A19 550 aa11.58□□□□□ -0.56
SMC4-210ENST00000469762 PURBQ96QR8 312 aaKnown RBP11.58□□□□□ -0.56
SMC4-210ENST00000469762 VIPAS39Q9H9C1 493 aa11.58□□□□□ -0.56
SMC4-210ENST00000469762 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.58□□□□□ -0.562e-144■■■■■ 553.7
SMC4-210ENST00000469762 PDS5AQ29RF7 1337 aaKnown RBP11.57□□□□□ -0.56
SMC4-210ENST00000469762 EIF3JO75822 258 aaKnown RBP11.57□□□□□ -0.56
SMC4-210ENST00000469762 BMP15O95972 392 aa11.57□□□□□ -0.56
SMC4-210ENST00000469762 TRIM14Q14142 442 aa11.57□□□□□ -0.56
SMC4-210ENST00000469762 SLC35G1Q2M3R5 365 aa11.57□□□□□ -0.56
SMC4-210ENST00000469762 ZNF662Q6ZS27 426 aa11.57□□□□□ -0.56
SMC4-210ENST00000469762 OR8K1Q8NGG5 319 aa11.57□□□□□ -0.56
SMC4-210ENST00000469762 GDAP1L1Q96MZ0 367 aa11.57□□□□□ -0.56
SMC4-210ENST00000469762 DUSP9Q99956 384 aaKnown RBP11.57□□□□□ -0.56
SMC4-210ENST00000469762 LAMB1P07942 1786 aa11.57□□□□□ -0.56
SMC4-210ENST00000469762 CHRNDQ07001 517 aa11.57□□□□□ -0.56
SMC4-210ENST00000469762 MED4Q9NPJ6 270 aa11.57□□□□□ -0.56
SMC4-210ENST00000469762 MAGEB6P1A0A0J9YX57 407 aa11.57□□□□□ -0.56
SMC4-210ENST00000469762 TTI2Q6NXR4 508 aa11.57□□□□□ -0.56
SMC4-210ENST00000469762 EEF2KMTQ96G04 330 aa11.57□□□□□ -0.56
SMC4-210ENST00000469762 DNAJC5Q9H3Z4 198 aa11.57□□□□□ -0.56
SMC4-210ENST00000469762 HAUS4Q9H6D7 363 aa11.57□□□□□ -0.56
SMC4-210ENST00000469762 A0A1W2PQC6 194 aa11.56□□□□□ -0.56
SMC4-210ENST00000469762 XBP1P17861 261 aa11.56□□□□□ -0.56
SMC4-210ENST00000469762 AKAP17AQ02040 695 aaKnown RBP11.56□□□□□ -0.56
SMC4-210ENST00000469762 SPAG1Q07617 926 aa11.56□□□□□ -0.56
SMC4-210ENST00000469762 RCSD1Q6JBY9 416 aa11.56□□□□□ -0.56
SMC4-210ENST00000469762 TMEM60Q9H2L4 133 aa11.56□□□□□ -0.56
SMC4-210ENST00000469762 H7C1D1 291 aa11.56□□□□□ -0.56
SMC4-210ENST00000469762 GYG1P46976 350 aa11.56□□□□□ -0.56
SMC4-210ENST00000469762 CATIPQ7Z7H3 387 aa11.56□□□□□ -0.56
SMC4-210ENST00000469762 PACS2Q86VP3 889 aa11.56□□□□□ -0.56
SMC4-210ENST00000469762 COG1Q8WTW3 980 aa11.56□□□□□ -0.56
SMC4-210ENST00000469762 RBM28Q9NW13 759 aaKnown RBP11.56□□□□□ -0.56
SMC4-210ENST00000469762 CWC15Q9P013 229 aaKnown RBP11.56□□□□□ -0.56
SMC4-210ENST00000469762 SAR1BQ9Y6B6 198 aa11.56□□□□□ -0.56
SMC4-210ENST00000469762 MYH14Q7Z406 1995 aaKnown RBP11.56□□□□□ -0.56
SMC4-210ENST00000469762 SCG2P13521 617 aa11.56□□□□□ -0.56
SMC4-210ENST00000469762 PFKFB3Q16875 520 aaPredicted RBP11.56□□□□□ -0.56
SMC4-210ENST00000469762 CAPZA3Q96KX2 299 aa11.56□□□□□ -0.56
SMC4-210ENST00000469762 KAT6BQ8WYB5 2073 aa11.56□□□□□ -0.56
SMC4-210ENST00000469762 EIF3CLB5ME19 914 aaKnown RBP11.55□□□□□ -0.56
SMC4-210ENST00000469762 IL6STP40189 918 aaPredicted RBP11.55□□□□□ -0.56
SMC4-210ENST00000469762 LEKR1Q6ZMV7 388 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 RASGRP4Q8TDF6 673 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 HDAC7Q8WUI4 952 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 EIF3CQ99613 913 aaKnown RBP11.55□□□□□ -0.56
SMC4-210ENST00000469762 HINFPQ9BQA5 517 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 DISC1Q9NRI5 854 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 ABCF2Q9UG63 623 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 B4DLN1 442 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 DDAH1O94760 285 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 TUBBP07437 444 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 SRGNP10124 158 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 GGCXP38435 758 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 EIF5P55010 431 aaKnown RBP11.55□□□□□ -0.56
SMC4-210ENST00000469762 EZH2Q15910 746 aaKnown RBP11.55□□□□□ -0.56
SMC4-210ENST00000469762 MIIPQ5JXC2 388 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 CCDC122Q5T0U0 273 aa11.55□□□□□ -0.56
SMC4-210ENST00000469762 INTS5Q6P9B9 1019 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms