RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 A0A087WZG4 1122 aa6.11□□□□□ -1.43
VPS8-220ENST00000469713 ESYT3A0FGR9 886 aa6.11□□□□□ -1.43
VPS8-220ENST00000469713 H0Y8X5 98 aa6.11□□□□□ -1.43
VPS8-220ENST00000469713 H3BS24 57 aa6.11□□□□□ -1.43
VPS8-220ENST00000469713 NOP56O00567 594 aaKnown RBP6.11□□□□□ -1.43
VPS8-220ENST00000469713 SRFP11831 508 aa6.11□□□□□ -1.43
VPS8-220ENST00000469713 HOXA10P31260 410 aaPredicted RBP6.11□□□□□ -1.43
VPS8-220ENST00000469713 PPP2R2AP63151 447 aa6.11□□□□□ -1.43
VPS8-220ENST00000469713 CLEC16AQ2KHT3 1053 aa6.11□□□□□ -1.43
VPS8-220ENST00000469713 NETO1Q8TDF5 533 aa6.11□□□□□ -1.43
VPS8-220ENST00000469713 RCC1LQ96I51 464 aaKnown RBP6.11□□□□□ -1.43
VPS8-220ENST00000469713 MRGPRX3Q96LB0 322 aa6.11□□□□□ -1.43
VPS8-220ENST00000469713 HSPA12BQ96MM6 686 aa6.11□□□□□ -1.43
VPS8-220ENST00000469713 ZDHHC15Q96MV8 337 aa6.11□□□□□ -1.43
VPS8-220ENST00000469713 HDAC8Q9BY41 377 aa6.11□□□□□ -1.43
VPS8-220ENST00000469713 SEMA6BQ9H3T3 888 aa6.11□□□□□ -1.43
VPS8-220ENST00000469713 ARHGEF4Q9NR80 690 aa6.11□□□□□ -1.43
VPS8-220ENST00000469713 ZC3H7BQ9UGR2 993 aaKnown RBP6.11□□□□□ -1.43
VPS8-220ENST00000469713 EMC9Q9Y3B6 208 aa6.11□□□□□ -1.43
VPS8-220ENST00000469713 PTCH2Q9Y6C5 1203 aa6.11□□□□□ -1.43
VPS8-220ENST00000469713 KCNH1O95259 989 aa6.1□□□□□ -1.43
VPS8-220ENST00000469713 TGFB1P01137 390 aa6.1□□□□□ -1.43
VPS8-220ENST00000469713 FOSL1P15407 271 aa6.1□□□□□ -1.43
VPS8-220ENST00000469713 CTSKP43235 329 aa6.1□□□□□ -1.43
VPS8-220ENST00000469713 IFI16Q16666 785 aaKnown RBP6.1□□□□□ -1.43
VPS8-220ENST00000469713 PRSS36Q5K4E3 855 aa6.1□□□□□ -1.43
VPS8-220ENST00000469713 CRTC3Q6UUV7 619 aa6.1□□□□□ -1.43
VPS8-220ENST00000469713 SLC51AQ86UW1 340 aa6.1□□□□□ -1.43
VPS8-220ENST00000469713 TRIM59Q8IWR1 403 aa6.1□□□□□ -1.43
VPS8-220ENST00000469713 ZBTB38Q8NAP3 1195 aaPredicted RBP6.1□□□□□ -1.43
VPS8-220ENST00000469713 BTN2A2Q8WVV5 523 aa6.1□□□□□ -1.43
VPS8-220ENST00000469713 FANCLQ9NW38 375 aa6.1□□□□□ -1.43
VPS8-220ENST00000469713 ZSWIM5Q9P217 1185 aa6.1□□□□□ -1.43
VPS8-220ENST00000469713 DIS3Q9Y2L1 958 aaKnown RBP6.1□□□□□ -1.43
VPS8-220ENST00000469713 ENPP3O14638 875 aa6.09□□□□□ -1.43
VPS8-220ENST00000469713 VAMP4O75379 141 aa6.09□□□□□ -1.43
VPS8-220ENST00000469713 GRIA2P42262 883 aa6.09□□□□□ -1.43
VPS8-220ENST00000469713 CLCN7P51798 805 aa6.09□□□□□ -1.43
VPS8-220ENST00000469713 HSP90AA2PQ14568 343 aaPredicted RBP6.09□□□□□ -1.43
VPS8-220ENST00000469713 YOD1Q5VVQ6 348 aaPredicted RBP6.09□□□□□ -1.43
VPS8-220ENST00000469713 FOXB2Q5VYV0 432 aa6.09□□□□□ -1.43
VPS8-220ENST00000469713 GTF2IRD2BQ6EKJ0 949 aa6.09□□□□□ -1.43
VPS8-220ENST00000469713 POMZP3Q6PJE2 187 aa6.09□□□□□ -1.43
VPS8-220ENST00000469713 GTF2IRD2Q86UP8 949 aa6.09□□□□□ -1.43
VPS8-220ENST00000469713 CRACR2BQ8N4Y2 399 aaPredicted RBP6.09□□□□□ -1.43
VPS8-220ENST00000469713 DAGLBQ8NCG7 672 aa6.09□□□□□ -1.43
VPS8-220ENST00000469713 ENOX1Q8TC92 643 aaKnown RBP6.09□□□□□ -1.43
VPS8-220ENST00000469713 UBE2FQ969M7 185 aa6.09□□□□□ -1.43
VPS8-220ENST00000469713 TCTN2Q96GX1 697 aa6.09□□□□□ -1.43
VPS8-220ENST00000469713 AARSD1Q9BTE6 412 aaKnown RBP6.09□□□□□ -1.43
VPS8-220ENST00000469713 TRIT1Q9H3H1 467 aaKnown RBP6.09□□□□□ -1.43
VPS8-220ENST00000469713 CWC22Q9HCG8 908 aaKnown RBP6.09□□□□□ -1.43
VPS8-220ENST00000469713 SEMA3GQ9NS98 782 aa6.09□□□□□ -1.43
VPS8-220ENST00000469713 GPATCH2Q9NW75 528 aa6.09□□□□□ -1.43
VPS8-220ENST00000469713 TMEM260Q9NX78 707 aa6.09□□□□□ -1.43
VPS8-220ENST00000469713 SF3B6Q9Y3B4 125 aaKnown RBP6.09□□□□□ -1.43
VPS8-220ENST00000469713 TMEM265A0A087WTH1 108 aa6.08□□□□□ -1.44
VPS8-220ENST00000469713 TRAV20A0A0B4J274 112 aa6.08□□□□□ -1.44
VPS8-220ENST00000469713 CDC45O75419 566 aa6.08□□□□□ -1.44
VPS8-220ENST00000469713 CAPNS1P04632 268 aa6.08□□□□□ -1.44
VPS8-220ENST00000469713 TPP2P29144 1249 aaPredicted RBP6.08□□□□□ -1.44
VPS8-220ENST00000469713 GRB10Q13322 594 aa6.08□□□□□ -1.44
VPS8-220ENST00000469713 DPY19L1Q2PZI1 675 aa6.08□□□□□ -1.44
VPS8-220ENST00000469713 TSPYL5Q86VY4 417 aaPredicted RBP6.08□□□□□ -1.44
VPS8-220ENST00000469713 ZNF655Q8N720 491 aaPredicted RBP6.08□□□□□ -1.44
VPS8-220ENST00000469713 ZSWIM2Q8NEG5 633 aa6.08□□□□□ -1.44
VPS8-220ENST00000469713 GPR55Q9Y2T6 319 aaPredicted RBP6.08□□□□□ -1.44
VPS8-220ENST00000469713 PITPNM2Q9BZ72 1349 aa6.07□□□□□ -1.44
VPS8-220ENST00000469713 PRODHO43272 600 aa6.07□□□□□ -1.44
VPS8-220ENST00000469713 GSNP06396 782 aa6.07□□□□□ -1.44
VPS8-220ENST00000469713 HSD3B2P26439 372 aa6.07□□□□□ -1.44
VPS8-220ENST00000469713 L1CAMP32004 1257 aa6.07□□□□□ -1.44
VPS8-220ENST00000469713 AMPD2Q01433 879 aa6.07□□□□□ -1.44
VPS8-220ENST00000469713 SF1Q15637 639 aaKnown RBP6.07□□□□□ -1.44
VPS8-220ENST00000469713 LONRF2Q1L5Z9 754 aa6.07□□□□□ -1.44
VPS8-220ENST00000469713 GAB4Q2WGN9 574 aa6.07□□□□□ -1.44
VPS8-220ENST00000469713 TMEM67Q5HYA8 995 aa6.07□□□□□ -1.44
VPS8-220ENST00000469713 FAM209AQ5JX71 171 aa6.07□□□□□ -1.44
VPS8-220ENST00000469713 CWF19L1Q69YN2 538 aaKnown RBP6.07□□□□□ -1.44
VPS8-220ENST00000469713 THAP5Q7Z6K1 395 aa6.07□□□□□ -1.44
VPS8-220ENST00000469713 HOMER1Q86YM7 354 aa6.07□□□□□ -1.44
VPS8-220ENST00000469713 APPBP2Q92624 585 aa6.07□□□□□ -1.44
VPS8-220ENST00000469713 EXOC2Q96KP1 924 aa6.07□□□□□ -1.44
VPS8-220ENST00000469713 SLC26A8Q96RN1 970 aa6.07□□□□□ -1.44
VPS8-220ENST00000469713 MCMBPQ9BTE3 642 aa6.07□□□□□ -1.44
VPS8-220ENST00000469713 ATP13A1Q9HD20 1204 aa6.07□□□□□ -1.44
VPS8-220ENST00000469713 SNX11Q9Y5W9 270 aa6.07□□□□□ -1.44
VPS8-220ENST00000469713 CD3EP07766 207 aa6.06□□□□□ -1.44
VPS8-220ENST00000469713 SYPP08247 313 aa6.06□□□□□ -1.44
VPS8-220ENST00000469713 MSMPQ1L6U9 139 aa6.06□□□□□ -1.44
VPS8-220ENST00000469713 EGFLAMQ63HQ2 1017 aa6.06□□□□□ -1.44
VPS8-220ENST00000469713 USHBP1Q8N6Y0 703 aa6.06□□□□□ -1.44
VPS8-220ENST00000469713 OSBP2Q969R2 916 aa6.06□□□□□ -1.44
VPS8-220ENST00000469713 CDC6Q99741 560 aa6.06□□□□□ -1.44
VPS8-220ENST00000469713 IER2Q9BTL4 223 aa6.06□□□□□ -1.44
VPS8-220ENST00000469713 DUSP13Q9UII6 198 aa6.06□□□□□ -1.44
VPS8-220ENST00000469713 TRBV23-1A0A0A0MS06 115 aa6.05□□□□□ -1.44
VPS8-220ENST00000469713 STXBP3O00186 592 aa6.05□□□□□ -1.44
VPS8-220ENST00000469713 SNRPB2P08579 225 aaKnown RBP6.05□□□□□ -1.44
VPS8-220ENST00000469713 FGFR1P11362 822 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms