RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 LMOD1P29536 600 aaPredicted RBP21.76■■□□□ 1.07
SMC4-209ENST00000468653 MARCKSP29966 332 aaPredicted RBP21.76■■□□□ 1.07
SMC4-209ENST00000468653 EARS2Q5JPH6 523 aaKnown RBP21.76■■□□□ 1.07
SMC4-209ENST00000468653 CCDC73Q6ZRK6 1079 aa21.76■■□□□ 1.07
SMC4-209ENST00000468653 DACT1Q9NYF0 836 aa21.76■■□□□ 1.07
SMC4-209ENST00000468653 CEP131Q9UPN4 1083 aa21.76■■□□□ 1.07
SMC4-209ENST00000468653 PNMA6FA0A0J9YX94 578 aa21.75■■□□□ 1.07
SMC4-209ENST00000468653 PPP6R2O75170 966 aa21.75■■□□□ 1.07
SMC4-209ENST00000468653 ASNSP08243 561 aa21.75■■□□□ 1.07
SMC4-209ENST00000468653 DAGLBQ8NCG7 672 aa21.75■■□□□ 1.07
SMC4-209ENST00000468653 TMX2Q9Y320 296 aa21.75■■□□□ 1.07
SMC4-209ENST00000468653 PCDHB6Q9Y5E3 794 aa21.75■■□□□ 1.07
SMC4-209ENST00000468653 A0A1W2PQ27 194 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 A0A1W2PQ64 194 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 A0A1W2PQD8 194 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 TRIM75PA6NK02 468 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 PIK3AP1Q6ZUJ8 805 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 FSIP1Q8NA03 581 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 ACER1Q8TDN7 264 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 ZMYND12Q9H0C1 365 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 GOPCQ9HD26 462 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 C6orf50Q9HD87 102 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 DDX19AQ9NUU7 478 aaKnown RBP21.74■■□□□ 1.07
SMC4-209ENST00000468653 GGA3Q9NZ52 723 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 FSD2A1L4K1 749 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 SMCO2A6NFE2 343 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 PHF20L1A8MW92 1017 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 USP17L10C9JJH3 530 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 NR1I2O75469 434 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 BMP3P12645 472 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 GNA11P29992 359 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 ECE1P42892 770 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 NOM1Q5C9Z4 860 aaKnown RBP21.74■■□□□ 1.07
SMC4-209ENST00000468653 NBPF12Q5TAG4 269 aaPredicted RBP21.74■■□□□ 1.07
SMC4-209ENST00000468653 GAS2L3Q86XJ1 694 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 HOOK2Q96ED9 719 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 NUP88Q99567 741 aaPredicted RBP21.74■■□□□ 1.07
SMC4-209ENST00000468653 SH2D4AQ9H788 454 aa21.74■■□□□ 1.07
SMC4-209ENST00000468653 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.74■■□□□ 1.07
SMC4-209ENST00000468653 ADAMTS3O15072 1205 aa21.73■■□□□ 1.07
SMC4-209ENST00000468653 IKQ13123 557 aaPredicted RBP21.73■■□□□ 1.07
SMC4-209ENST00000468653 DCAF15Q66K64 600 aa21.73■■□□□ 1.07
SMC4-209ENST00000468653 LRSAM1Q6UWE0 723 aa21.73■■□□□ 1.07
SMC4-209ENST00000468653 MRPS27Q92552 414 aaKnown RBP21.73■■□□□ 1.07
SMC4-209ENST00000468653 NUP62CLQ9H1M0 184 aa21.73■■□□□ 1.07
SMC4-209ENST00000468653 CCDC194A0A1B0GVG4 234 aa21.72■■□□□ 1.07
SMC4-209ENST00000468653 ZBTB5O15062 677 aa21.72■■□□□ 1.07
SMC4-209ENST00000468653 HIRAP54198 1017 aaPredicted RBP21.72■■□□□ 1.07
SMC4-209ENST00000468653 GPR162Q16538 588 aa21.72■■□□□ 1.07
SMC4-209ENST00000468653 SPICE1Q8N0Z3 855 aa21.72■■□□□ 1.07
SMC4-209ENST00000468653 COA7Q96BR5 231 aa21.72■■□□□ 1.07
SMC4-209ENST00000468653 GOLPH3LQ9H4A5 285 aa21.72■■□□□ 1.07
SMC4-209ENST00000468653 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.72■■□□□ 1.07
SMC4-209ENST00000468653 TRAPPC10P48553 1259 aa21.71■■□□□ 1.07
SMC4-209ENST00000468653 TTC38Q5R3I4 469 aa21.71■■□□□ 1.07
SMC4-209ENST00000468653 AXDND1Q5T1B0 1012 aaPredicted RBP21.71■■□□□ 1.07
SMC4-209ENST00000468653 L1TD1Q5T7N2 865 aaKnown RBP21.71■■□□□ 1.07
SMC4-209ENST00000468653 RASGRP4Q8TDF6 673 aa21.71■■□□□ 1.07
SMC4-209ENST00000468653 MTMR8Q96EF0 704 aa21.71■■□□□ 1.07
SMC4-209ENST00000468653 ADARB2Q9NS39 739 aaKnown RBP21.71■■□□□ 1.07
SMC4-209ENST00000468653 PCDHA6Q9UN73 950 aa21.71■■□□□ 1.07
SMC4-209ENST00000468653 PCDHA8Q9Y5H6 950 aa21.71■■□□□ 1.07
SMC4-209ENST00000468653 ESYT2A0FGR8 921 aa21.71■■□□□ 1.07
SMC4-209ENST00000468653 TMEM232C9JQI7 657 aa21.71■■□□□ 1.07
SMC4-209ENST00000468653 M0R2N6 131 aa21.71■■□□□ 1.07
SMC4-209ENST00000468653 CTNND1O60716 968 aaKnown RBP21.71■■□□□ 1.07
SMC4-209ENST00000468653 FAM160A1Q05DH4 1040 aa21.71■■□□□ 1.07
SMC4-209ENST00000468653 KRI1Q8N9T8 703 aaKnown RBP21.71■■□□□ 1.07
SMC4-209ENST00000468653 GINM1Q9NU53 330 aa21.71■■□□□ 1.07
SMC4-209ENST00000468653 CUTAO60888 179 aa21.7■■□□□ 1.06
SMC4-209ENST00000468653 BMP15O95972 392 aa21.7■■□□□ 1.06
SMC4-209ENST00000468653 CMA1P23946 247 aa21.7■■□□□ 1.06
SMC4-209ENST00000468653 DPY19L2Q6NUT2 758 aa21.7■■□□□ 1.06
SMC4-209ENST00000468653 PPP1R18Q6NYC8 613 aa21.7■■□□□ 1.06
SMC4-209ENST00000468653 ZNF341Q9BYN7 854 aa21.7■■□□□ 1.06
SMC4-209ENST00000468653 CLSTN2Q9H4D0 955 aa21.7■■□□□ 1.06
SMC4-209ENST00000468653 PPP2R3BQ9Y5P8 575 aa21.7■■□□□ 1.06
SMC4-209ENST00000468653 A0A1B0GVL5 298 aa21.69■■□□□ 1.06
SMC4-209ENST00000468653 ZNF174Q15697 407 aa21.69■■□□□ 1.06
SMC4-209ENST00000468653 CAMK4Q16566 473 aa21.69■■□□□ 1.06
SMC4-209ENST00000468653 SYDE2Q5VT97 1194 aa21.69■■□□□ 1.06
SMC4-209ENST00000468653 PRAMEF18Q5VWM3 479 aa21.69■■□□□ 1.06
SMC4-209ENST00000468653 TNMDQ9H2S6 317 aa21.69■■□□□ 1.06
SMC4-209ENST00000468653 KINO60870 393 aaKnown RBP21.69■■□□□ 1.06
SMC4-209ENST00000468653 PPP1R11O60927 126 aaPredicted RBP21.69■■□□□ 1.06
SMC4-209ENST00000468653 ADCY7P51828 1080 aa21.69■■□□□ 1.06
SMC4-209ENST00000468653 ZYXQ15942 572 aaKnown RBP21.69■■□□□ 1.06
SMC4-209ENST00000468653 CDC37Q16543 378 aaPredicted RBP21.69■■□□□ 1.06
SMC4-209ENST00000468653 QRICH1Q2TAL8 776 aa21.69■■□□□ 1.06
SMC4-209ENST00000468653 CCDC84Q86UT8 332 aaPredicted RBP21.69■■□□□ 1.06
SMC4-209ENST00000468653 FEZ1Q99689 392 aa21.69■■□□□ 1.06
SMC4-209ENST00000468653 VCPKMTQ9H867 229 aa21.69■■□□□ 1.06
SMC4-209ENST00000468653 KIAA1755Q5JYT7 1200 aa21.68■■□□□ 1.06
SMC4-209ENST00000468653 FAM83BQ5T0W9 1011 aa21.68■■□□□ 1.06
SMC4-209ENST00000468653 BTNL9Q6UXG8 535 aa21.68■■□□□ 1.06
SMC4-209ENST00000468653 KRT25Q7Z3Z0 450 aa21.68■■□□□ 1.06
SMC4-209ENST00000468653 ENGASEQ8NFI3 743 aa21.68■■□□□ 1.06
SMC4-209ENST00000468653 CLIC6Q96NY7 704 aa21.68■■□□□ 1.06
SMC4-209ENST00000468653 PTPREP23469 700 aa21.67■■□□□ 1.06
SMC4-209ENST00000468653 MRE11P49959 708 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms