RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 FKTNO75072 461 aa6.35□□□□□ -1.39
SSB-208ENST00000468600 TNFRSF1AP19438 455 aa6.35□□□□□ -1.39
SSB-208ENST00000468600 HHIPL2Q6UWX4 724 aa6.35□□□□□ -1.39
SSB-208ENST00000468600 FBXO33Q7Z6M2 555 aa6.35□□□□□ -1.39
SSB-208ENST00000468600 KIF2CQ99661 725 aa6.35□□□□□ -1.39
SSB-208ENST00000468600 SYPP08247 313 aa6.34□□□□□ -1.39
SSB-208ENST00000468600 CAMK2GQ13555 558 aaPredicted RBP6.34□□□□□ -1.39
SSB-208ENST00000468600 LAPTM5Q13571 262 aa6.34□□□□□ -1.39
SSB-208ENST00000468600 RAB3GAP1Q15042 981 aa6.34□□□□□ -1.39
SSB-208ENST00000468600 BNC2Q6ZN30 1099 aaPredicted RBP6.34□□□□□ -1.39
SSB-208ENST00000468600 LDHDQ86WU2 507 aa6.34□□□□□ -1.39
SSB-208ENST00000468600 IGDCC3Q8IVU1 814 aa6.34□□□□□ -1.39
SSB-208ENST00000468600 LINC00116Q8NCU8 138 aa6.34□□□□□ -1.39
SSB-208ENST00000468600 RHOVQ96L33 236 aa6.34□□□□□ -1.39
SSB-208ENST00000468600 FCRL2Q96LA5 508 aaPredicted RBP6.34□□□□□ -1.39
SSB-208ENST00000468600 PLCD4Q9BRC7 762 aa6.34□□□□□ -1.39
SSB-208ENST00000468600 RSRP1Q9BUV0 290 aa6.34□□□□□ -1.39
SSB-208ENST00000468600 TNFRSF10DQ9UBN6 386 aa6.34□□□□□ -1.39
SSB-208ENST00000468600 TMEM82A0PJX8 343 aa6.33□□□□□ -1.4
SSB-208ENST00000468600 WTIPA6NIX2 430 aaPredicted RBP6.33□□□□□ -1.4
SSB-208ENST00000468600 HTR3BO95264 441 aa6.33□□□□□ -1.4
SSB-208ENST00000468600 ENDOUP21128 410 aaKnown RBP6.33□□□□□ -1.4
SSB-208ENST00000468600 XPCQ01831 940 aaPredicted RBP6.33□□□□□ -1.4
SSB-208ENST00000468600 MLECQ14165 292 aa6.33□□□□□ -1.4
SSB-208ENST00000468600 NLGN1Q8N2Q7 840 aa6.33□□□□□ -1.4
SSB-208ENST00000468600 KLHL14Q9P2G3 628 aa6.33□□□□□ -1.4
SSB-208ENST00000468600 BUB1BO60566 1050 aaPredicted RBP6.32□□□□□ -1.4
SSB-208ENST00000468600 F13A1P00488 732 aa6.32□□□□□ -1.4
SSB-208ENST00000468600 PF4P02776 101 aa6.32□□□□□ -1.4
SSB-208ENST00000468600 KCNC1P48547 511 aa6.32□□□□□ -1.4
SSB-208ENST00000468600 ZXDAP98168 799 aa6.32□□□□□ -1.4
SSB-208ENST00000468600 PWP1Q13610 501 aa6.32□□□□□ -1.4
SSB-208ENST00000468600 BBS9Q3SYG4 887 aa6.32□□□□□ -1.4
SSB-208ENST00000468600 HSF5Q4G112 596 aaPredicted RBP6.32□□□□□ -1.4
SSB-208ENST00000468600 TMEM74Q96NL1 305 aa6.32□□□□□ -1.4
SSB-208ENST00000468600 PALD1Q9ULE6 856 aa6.32□□□□□ -1.4
SSB-208ENST00000468600 GPR55Q9Y2T6 319 aaPredicted RBP6.32□□□□□ -1.4
SSB-208ENST00000468600 NUDT19A8MXV4 375 aa6.31□□□□□ -1.4
SSB-208ENST00000468600 RGS13O14921 159 aa6.31□□□□□ -1.4
SSB-208ENST00000468600 PRICKLE3O43900 615 aaPredicted RBP6.31□□□□□ -1.4
SSB-208ENST00000468600 GRIN3BO60391 1043 aa6.31□□□□□ -1.4
SSB-208ENST00000468600 RTP5Q14D33 572 aa6.31□□□□□ -1.4
SSB-208ENST00000468600 ZPBP2Q6X784 338 aa6.31□□□□□ -1.4
SSB-208ENST00000468600 TMC3Q7Z5M5 1100 aa6.31□□□□□ -1.4
SSB-208ENST00000468600 VWCEQ96DN2 955 aa6.31□□□□□ -1.4
SSB-208ENST00000468600 GPR20Q99678 358 aa6.31□□□□□ -1.4
SSB-208ENST00000468600 PCDHA5Q9Y5H7 936 aa6.31□□□□□ -1.4
SSB-208ENST00000468600 FADS2P1A8MWK0 482 aa6.3□□□□□ -1.4
SSB-208ENST00000468600 SORBS3O60504 671 aa6.3□□□□□ -1.4
SSB-208ENST00000468600 RAG1P15918 1043 aa6.3□□□□□ -1.4
SSB-208ENST00000468600 PFKLP17858 780 aa6.3□□□□□ -1.4
SSB-208ENST00000468600 ERCC3P19447 782 aa6.3□□□□□ -1.4
SSB-208ENST00000468600 ITGAEP38570 1179 aa6.3□□□□□ -1.4
SSB-208ENST00000468600 CYP4F8P98187 520 aa6.3□□□□□ -1.4
SSB-208ENST00000468600 CAP1Q01518 475 aa6.3□□□□□ -1.4
SSB-208ENST00000468600 MPP2Q14168 576 aa6.3□□□□□ -1.4
SSB-208ENST00000468600 RELL1Q8IUW5 271 aa6.3□□□□□ -1.4
SSB-208ENST00000468600 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.3□□□□□ -1.4
SSB-208ENST00000468600 TNFRSF12AQ9NP84 129 aa6.3□□□□□ -1.4
SSB-208ENST00000468600 CNOT11Q9UKZ1 510 aaKnown RBP6.3□□□□□ -1.4
SSB-208ENST00000468600 POLR3KQ9Y2Y1 108 aaPredicted RBP6.3□□□□□ -1.4
SSB-208ENST00000468600 K7ESM1 405 aa6.29□□□□□ -1.4
SSB-208ENST00000468600 PRKCAP17252 672 aa6.29□□□□□ -1.4
SSB-208ENST00000468600 NCKAP1LP55160 1127 aa6.29□□□□□ -1.4
SSB-208ENST00000468600 ZNF827Q17R98 1081 aa6.29□□□□□ -1.4
SSB-208ENST00000468600 NBPF9Q3BBW0 867 aa6.29□□□□□ -1.4
SSB-208ENST00000468600 UBXN11Q5T124 520 aa6.29□□□□□ -1.4
SSB-208ENST00000468600 TP53I13Q8NBR0 393 aaPredicted RBP6.29□□□□□ -1.4
SSB-208ENST00000468600 NUP43Q8NFH3 380 aa6.29□□□□□ -1.4
SSB-208ENST00000468600 EAF1Q96JC9 268 aaPredicted RBP6.29□□□□□ -1.4
SSB-208ENST00000468600 FAM161BQ96MY7 647 aa6.29□□□□□ -1.4
SSB-208ENST00000468600 KCNQ5Q9NR82 932 aa6.29□□□□□ -1.4
SSB-208ENST00000468600 USP40Q9NVE5 1235 aa6.29□□□□□ -1.4
SSB-208ENST00000468600 DNAJA2O60884 412 aa6.28□□□□□ -1.4
SSB-208ENST00000468600 PRAMEF1O95521 474 aa6.28□□□□□ -1.4
SSB-208ENST00000468600 GBP2P32456 591 aaPredicted RBP6.28□□□□□ -1.4
SSB-208ENST00000468600 SNW1Q13573 536 aaKnown RBP6.28□□□□□ -1.4
SSB-208ENST00000468600 KIR3DS1Q14943 382 aa6.28□□□□□ -1.4
SSB-208ENST00000468600 ARSHQ5FYA8 562 aa6.28□□□□□ -1.4
SSB-208ENST00000468600 REC114Q7Z4M0 266 aa6.28□□□□□ -1.4
SSB-208ENST00000468600 A0A1W2PQ45 241 aaPredicted RBP6.27□□□□□ -1.41
SSB-208ENST00000468600 A0A1W2PQY0 241 aa6.27□□□□□ -1.41
SSB-208ENST00000468600 F6X3S4 739 aa6.27□□□□□ -1.41
SSB-208ENST00000468600 FFAR3O14843 346 aa6.27□□□□□ -1.41
SSB-208ENST00000468600 MATN3O15232 486 aa6.27□□□□□ -1.41
SSB-208ENST00000468600 SIGLEC6O43699 453 aa6.27□□□□□ -1.41
SSB-208ENST00000468600 UBOX5O94941 541 aa6.27□□□□□ -1.41
SSB-208ENST00000468600 GARTP22102 1010 aa6.27□□□□□ -1.41
SSB-208ENST00000468600 LIMS1P48059 325 aa6.27□□□□□ -1.41
SSB-208ENST00000468600 SLURP1P55000 103 aa6.27□□□□□ -1.41
SSB-208ENST00000468600 RAD51AP2Q09MP3 1159 aa6.27□□□□□ -1.41
SSB-208ENST00000468600 NR1I3Q14994 352 aa6.27□□□□□ -1.41
SSB-208ENST00000468600 SNAP47Q5SQN1 464 aa6.27□□□□□ -1.41
SSB-208ENST00000468600 ZFYVE27Q5T4F4 411 aa6.27□□□□□ -1.41
SSB-208ENST00000468600 NBPF12Q5TAG4 269 aaPredicted RBP6.27□□□□□ -1.41
SSB-208ENST00000468600 ZC3H14Q6PJT7 736 aaKnown RBP6.27□□□□□ -1.41
SSB-208ENST00000468600 RPTNQ6XPR3 784 aa6.27□□□□□ -1.41
SSB-208ENST00000468600 FAM196AQ6ZSG2 479 aa6.27□□□□□ -1.41
SSB-208ENST00000468600 SLCO6A1Q86UG4 719 aa6.27□□□□□ -1.41
SSB-208ENST00000468600 AEBP1Q8IUX7 1158 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms