RNA–Protein interactions for RNA: ENST00000468479.5

FDPS-207, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 938 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-207ENST00000468479 SWAP70Q9UH65 585 aa15.46■□□□□ 0.07
FDPS-207ENST00000468479 PNMA3Q9UL41 463 aa15.46■□□□□ 0.07
FDPS-207ENST00000468479 DDX60LQ5H9U9 1706 aaKnown RBP15.46■□□□□ 0.06
FDPS-207ENST00000468479 MKI67P46013 3256 aaKnown RBP15.45■□□□□ 0.06
FDPS-207ENST00000468479 TRIM75PA6NK02 468 aa15.45■□□□□ 0.06
FDPS-207ENST00000468479 DEXIO95424 95 aa15.45■□□□□ 0.06
FDPS-207ENST00000468479 ASNSP08243 561 aa15.45■□□□□ 0.06
FDPS-207ENST00000468479 CAP2P40123 477 aa15.45■□□□□ 0.06
FDPS-207ENST00000468479 GNAQP50148 359 aa15.45■□□□□ 0.06
FDPS-207ENST00000468479 LACTBP83111 547 aaPredicted RBP15.45■□□□□ 0.06
FDPS-207ENST00000468479 TROAPQ12815 778 aa15.45■□□□□ 0.06
FDPS-207ENST00000468479 STK11IPQ8N1F8 1099 aa15.45■□□□□ 0.06
FDPS-207ENST00000468479 ZNF280CQ8ND82 737 aa15.45■□□□□ 0.06
FDPS-207ENST00000468479 NEDD1Q8NHV4 660 aa15.45■□□□□ 0.06
FDPS-207ENST00000468479 CTCFLQ8NI51 663 aaPredicted RBP15.45■□□□□ 0.06
FDPS-207ENST00000468479 SMCR8Q8TEV9 937 aaPredicted RBP15.45■□□□□ 0.06
FDPS-207ENST00000468479 FSD2A1L4K1 749 aa15.44■□□□□ 0.06
FDPS-207ENST00000468479 GOLGA6L3A6NEY3 463 aa15.44■□□□□ 0.06
FDPS-207ENST00000468479 USP17L5A8MUK1 530 aa15.44■□□□□ 0.06
FDPS-207ENST00000468479 SMIM22K7EJ46 135 aa15.44■□□□□ 0.06
FDPS-207ENST00000468479 FIBPO43427 364 aa15.44■□□□□ 0.06
FDPS-207ENST00000468479 TSPY3P0CV98 308 aa15.44■□□□□ 0.06
FDPS-207ENST00000468479 TSPY8P0CW00 308 aa15.44■□□□□ 0.06
FDPS-207ENST00000468479 XBP1P17861 261 aa15.44■□□□□ 0.06
FDPS-207ENST00000468479 RASA1P20936 1047 aa15.44■□□□□ 0.06
FDPS-207ENST00000468479 CDK8P49336 464 aa15.44■□□□□ 0.06
FDPS-207ENST00000468479 PLCD1P51178 756 aa15.44■□□□□ 0.06
FDPS-207ENST00000468479 AKAP17AQ02040 695 aaKnown RBP15.44■□□□□ 0.06
FDPS-207ENST00000468479 FOXD4L6Q3SYB3 417 aaPredicted RBP15.44■□□□□ 0.06
FDPS-207ENST00000468479 C17orf99Q6UX52 265 aa15.44■□□□□ 0.06
FDPS-207ENST00000468479 FOXD4L3Q6VB84 417 aaPredicted RBP15.44■□□□□ 0.06
FDPS-207ENST00000468479 FAM177A1Q8N128 213 aaPredicted RBP15.44■□□□□ 0.06
FDPS-207ENST00000468479 PROCA1Q8NCQ7 364 aaPredicted RBP15.44■□□□□ 0.06
FDPS-207ENST00000468479 NUP133Q8WUM0 1156 aa15.44■□□□□ 0.06
FDPS-207ENST00000468479 SPATA32Q96LK8 384 aa15.44■□□□□ 0.06
FDPS-207ENST00000468479 SLC26A6Q9BXS9 759 aa15.44■□□□□ 0.06
FDPS-207ENST00000468479 GZF1Q9H116 711 aaPredicted RBP15.44■□□□□ 0.06
FDPS-207ENST00000468479 EHD4Q9H223 541 aa15.44■□□□□ 0.06
FDPS-207ENST00000468479 KAT14Q9H8E8 782 aa15.44■□□□□ 0.06
FDPS-207ENST00000468479 SAP30BPQ9UHR5 308 aaKnown RBP15.44■□□□□ 0.06
FDPS-207ENST00000468479 RCOR1Q9UKL0 485 aa15.44■□□□□ 0.06
FDPS-207ENST00000468479 FOCADQ5VW36 1801 aa15.44■□□□□ 0.06
FDPS-207ENST00000468479 PRPF3O43395 683 aaKnown RBP15.43■□□□□ 0.06
FDPS-207ENST00000468479 NOVP48745 357 aa15.43■□□□□ 0.06
FDPS-207ENST00000468479 MOGSQ13724 837 aa15.43■□□□□ 0.06
FDPS-207ENST00000468479 SAFBQ15424 915 aaKnown RBP eCLIP15.43■□□□□ 0.06
FDPS-207ENST00000468479 SLC9C1Q4G0N8 1177 aa15.43■□□□□ 0.06
FDPS-207ENST00000468479 FAM47AQ5JRC9 791 aa15.43■□□□□ 0.06
FDPS-207ENST00000468479 RCSD1Q6JBY9 416 aa15.43■□□□□ 0.06
FDPS-207ENST00000468479 CAVIN1Q6NZI2 390 aaKnown RBP15.43■□□□□ 0.06
FDPS-207ENST00000468479 METTL16Q86W50 562 aaKnown RBP15.43■□□□□ 0.06
FDPS-207ENST00000468479 RAB11FIP4Q86YS3 637 aa15.43■□□□□ 0.06
FDPS-207ENST00000468479 LEO1Q8WVC0 666 aaPredicted RBP15.43■□□□□ 0.06
FDPS-207ENST00000468479 CHAMP1Q96JM3 812 aa15.43■□□□□ 0.06
FDPS-207ENST00000468479 LZTS2Q9BRK4 669 aa15.43■□□□□ 0.06
FDPS-207ENST00000468479 MYL10Q9BUA6 226 aa15.43■□□□□ 0.06
FDPS-207ENST00000468479 CPA4Q9UI42 421 aa15.43■□□□□ 0.06
FDPS-207ENST00000468479 AGTPBP1Q9UPW5 1226 aa15.43■□□□□ 0.06
FDPS-207ENST00000468479 PLIN4Q96Q06 1357 aa15.43■□□□□ 0.06
FDPS-207ENST00000468479 HTTP42858 3142 aa15.43■□□□□ 0.06
FDPS-207ENST00000468479 KIAA0100Q14667 2235 aaKnown RBP15.42■□□□□ 0.06
FDPS-207ENST00000468479 GOLGA6L4A6NEF3 574 aa15.42■□□□□ 0.06
FDPS-207ENST00000468479 FAM196BA6NMK8 535 aa15.42■□□□□ 0.06
FDPS-207ENST00000468479 DTNBO60941 627 aa15.42■□□□□ 0.06
FDPS-207ENST00000468479 RXRAP19793 462 aa15.42■□□□□ 0.06
FDPS-207ENST00000468479 GABPAQ06546 454 aa15.42■□□□□ 0.06
FDPS-207ENST00000468479 SPP2Q13103 211 aa15.42■□□□□ 0.06
FDPS-207ENST00000468479 ZSCAN23Q3MJ62 389 aa15.42■□□□□ 0.06
FDPS-207ENST00000468479 KRT40Q6A162 431 aa15.42■□□□□ 0.06
FDPS-207ENST00000468479 GPAT2Q6NUI2 795 aa15.42■□□□□ 0.06
FDPS-207ENST00000468479 TMTC3Q6ZXV5 915 aa15.42■□□□□ 0.06
FDPS-207ENST00000468479 CCDC144CPQ8IYA2 1237 aa15.42■□□□□ 0.06
FDPS-207ENST00000468479 PHKBQ93100 1093 aa15.42■□□□□ 0.06
FDPS-207ENST00000468479 ARMC5Q96C12 935 aa15.42■□□□□ 0.06
FDPS-207ENST00000468479 DYNLL2Q96FJ2 89 aa15.42■□□□□ 0.06
FDPS-207ENST00000468479 GDPD2Q9HCC8 539 aa15.42■□□□□ 0.06
FDPS-207ENST00000468479 RTEL1Q9NZ71 1219 aa15.42■□□□□ 0.06
FDPS-207ENST00000468479 TMOD4Q9NZQ9 345 aa15.42■□□□□ 0.06
FDPS-207ENST00000468479 CDK5RAP2Q96SN8 1893 aa15.42■□□□□ 0.06
FDPS-207ENST00000468479 GADD45BO75293 160 aaPredicted RBP15.41■□□□□ 0.06
FDPS-207ENST00000468479 OSBPP22059 807 aa15.41■□□□□ 0.06
FDPS-207ENST00000468479 U2AF2P26368 475 aaKnown RBP eCLIP15.41■□□□□ 0.064e-6■□□□□ 10.9
FDPS-207ENST00000468479 FXR1P51114 621 aaKnown RBP eCLIP15.41■□□□□ 0.062e-8■■□□□ 13.1
FDPS-207ENST00000468479 FCGRTP55899 365 aa15.41■□□□□ 0.06
FDPS-207ENST00000468479 FUT2Q10981 343 aa15.41■□□□□ 0.06
FDPS-207ENST00000468479 CCDC183Q5T5S1 534 aa15.41■□□□□ 0.06
FDPS-207ENST00000468479 CCDC17Q96LX7 622 aa15.41■□□□□ 0.06
FDPS-207ENST00000468479 WDR18Q9BV38 432 aa15.41■□□□□ 0.06
FDPS-207ENST00000468479 TMEM106CQ9BVX2 250 aa15.41■□□□□ 0.06
FDPS-207ENST00000468479 IL17RBQ9NRM6 502 aa15.41■□□□□ 0.06
FDPS-207ENST00000468479 SERPINB13Q9UIV8 391 aa15.41■□□□□ 0.06
FDPS-207ENST00000468479 YEATS4O95619 227 aa15.4■□□□□ 0.06
FDPS-207ENST00000468479 CYP2C8P10632 490 aa15.4■□□□□ 0.06
FDPS-207ENST00000468479 TOP1P11387 765 aaKnown RBP15.4■□□□□ 0.06
FDPS-207ENST00000468479 SMARCA1P28370 1054 aa15.4■□□□□ 0.06
FDPS-207ENST00000468479 PSMC4P43686 418 aa15.4■□□□□ 0.06
FDPS-207ENST00000468479 MRE11P49959 708 aa15.4■□□□□ 0.06
FDPS-207ENST00000468479 GUCY1B3Q02153 619 aa15.4■□□□□ 0.06
FDPS-207ENST00000468479 PNMA1Q8ND90 353 aa15.4■□□□□ 0.06
FDPS-207ENST00000468479 KCNG4Q8TDN1 519 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms