RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 DEXIO95424 95 aa9.57□□□□□ -0.88
UBE4B-205ENST00000465408 CCL5P13501 91 aa9.57□□□□□ -0.88
UBE4B-205ENST00000465408 RPS12P25398 132 aaKnown RBP9.57□□□□□ -0.88
UBE4B-205ENST00000465408 PICALMQ13492 652 aa9.57□□□□□ -0.88
UBE4B-205ENST00000465408 SF3A1Q15459 793 aaKnown RBP9.57□□□□□ -0.88
UBE4B-205ENST00000465408 MAP3K11Q16584 847 aa9.57□□□□□ -0.88
UBE4B-205ENST00000465408 ANO1Q5XXA6 986 aa9.57□□□□□ -0.88
UBE4B-205ENST00000465408 TMTC3Q6ZXV5 915 aa9.57□□□□□ -0.88
UBE4B-205ENST00000465408 USP17L1Q7RTZ2 530 aa9.57□□□□□ -0.88
UBE4B-205ENST00000465408 CKAP2LQ8IYA6 745 aa9.57□□□□□ -0.88
UBE4B-205ENST00000465408 LINC00301Q8NCQ3 95 aa9.57□□□□□ -0.88
UBE4B-205ENST00000465408 ADAMTS19Q8TE59 1207 aa9.57□□□□□ -0.88
UBE4B-205ENST00000465408 U2AF1L4Q8WU68 220 aaKnown RBP9.57□□□□□ -0.88
UBE4B-205ENST00000465408 FAM163AQ96GL9 167 aaPredicted RBP9.57□□□□□ -0.88
UBE4B-205ENST00000465408 EYA3Q99504 573 aa9.57□□□□□ -0.88
UBE4B-205ENST00000465408 FUCA2Q9BTY2 467 aa9.57□□□□□ -0.88
UBE4B-205ENST00000465408 TNMDQ9H2S6 317 aa9.57□□□□□ -0.88
UBE4B-205ENST00000465408 DBNDD1Q9H9R9 158 aa9.57□□□□□ -0.88
UBE4B-205ENST00000465408 MKNK2Q9HBH9 465 aa9.57□□□□□ -0.88
UBE4B-205ENST00000465408 KCNQ5Q9NR82 932 aa9.57□□□□□ -0.88
UBE4B-205ENST00000465408 DDX19AQ9NUU7 478 aaKnown RBP9.57□□□□□ -0.88
UBE4B-205ENST00000465408 RBM28Q9NW13 759 aaKnown RBP9.57□□□□□ -0.88
UBE4B-205ENST00000465408 PCDHA7Q9UN72 937 aa9.57□□□□□ -0.88
UBE4B-205ENST00000465408 TTF2Q9UNY4 1162 aaKnown RBP9.57□□□□□ -0.88
UBE4B-205ENST00000465408 TCHHQ07283 1943 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 NAV1Q8NEY1 1877 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.56□□□□□ -0.88
UBE4B-205ENST00000465408 SPTLC2O15270 562 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 YEATS4O95619 227 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 CALM1P0DP23 149 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 CALM2P0DP24 149 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 CALM3P0DP25 149 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 PLCG2P16885 1265 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 RASA1P20936 1047 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 AKAP17AQ02040 695 aaKnown RBP9.56□□□□□ -0.88
UBE4B-205ENST00000465408 CCDC173Q0VFZ6 552 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 FUT2Q10981 343 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 TROAPQ12815 778 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 PRKG1Q13976 671 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 ARHGEF6Q15052 776 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 RCSD1Q6JBY9 416 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 CCDC73Q6ZRK6 1079 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 CERS3Q8IU89 383 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 DIS3L2Q8IYB7 885 aaKnown RBP9.56□□□□□ -0.88
UBE4B-205ENST00000465408 RGS22Q8NE09 1264 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 CTCFLQ8NI51 663 aaPredicted RBP9.56□□□□□ -0.88
UBE4B-205ENST00000465408 PIBF1Q8WXW3 757 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 ANP32BQ92688 251 aaKnown RBP9.56□□□□□ -0.88
UBE4B-205ENST00000465408 PTPN18Q99952 460 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 RNF26Q9BY78 433 aaPredicted RBP9.56□□□□□ -0.88
UBE4B-205ENST00000465408 RNF208Q9H0X6 261 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 KAT14Q9H8E8 782 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 RTN4Q9NQC3 1192 aaKnown RBP9.56□□□□□ -0.88
UBE4B-205ENST00000465408 IL17RBQ9NRM6 502 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 POLR3EQ9NVU0 708 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 VPS54Q9P1Q0 977 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.56□□□□□ -0.88
UBE4B-205ENST00000465408 PKD1L2Q7Z442 2459 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 CNTNAP5Q8WYK1 1306 aa9.56□□□□□ -0.88
UBE4B-205ENST00000465408 BTBD18B2RXH4 712 aa9.55□□□□□ -0.88
UBE4B-205ENST00000465408 PRPF3O43395 683 aaKnown RBP9.55□□□□□ -0.88
UBE4B-205ENST00000465408 MMP1P03956 469 aa9.55□□□□□ -0.88
UBE4B-205ENST00000465408 TSPY3P0CV98 308 aa9.55□□□□□ -0.88
UBE4B-205ENST00000465408 TSPY8P0CW00 308 aa9.55□□□□□ -0.88
UBE4B-205ENST00000465408 FOSL2P15408 326 aa9.55□□□□□ -0.88
UBE4B-205ENST00000465408 MARCKSP29966 332 aaPredicted RBP9.55□□□□□ -0.88
UBE4B-205ENST00000465408 CDK8P49336 464 aa9.55□□□□□ -0.88
UBE4B-205ENST00000465408 TYRO3Q06418 890 aa9.55□□□□□ -0.88
UBE4B-205ENST00000465408 SAFBQ15424 915 aaKnown RBP eCLIP9.55□□□□□ -0.88
UBE4B-205ENST00000465408 PKN1Q16512 942 aa9.55□□□□□ -0.88
UBE4B-205ENST00000465408 LDLRAD1Q5T700 205 aa9.55□□□□□ -0.88
UBE4B-205ENST00000465408 C16orf86Q6ZW13 317 aa9.55□□□□□ -0.88
UBE4B-205ENST00000465408 ZNF444Q8N0Y2 327 aaPredicted RBP9.55□□□□□ -0.88
UBE4B-205ENST00000465408 SRBD1Q8N5C6 995 aaKnown RBP9.55□□□□□ -0.88
UBE4B-205ENST00000465408 KCNG4Q8TDN1 519 aa9.55□□□□□ -0.88
UBE4B-205ENST00000465408 OXER1Q8TDS5 423 aa9.55□□□□□ -0.88
UBE4B-205ENST00000465408 MRPS27Q92552 414 aaKnown RBP9.55□□□□□ -0.88
UBE4B-205ENST00000465408 PPP1R9BQ96SB3 815 aa9.55□□□□□ -0.88
UBE4B-205ENST00000465408 UHRF1Q96T88 793 aaPredicted RBP9.55□□□□□ -0.88
UBE4B-205ENST00000465408 SEMA6BQ9H3T3 888 aa9.55□□□□□ -0.88
UBE4B-205ENST00000465408 USP40Q9NVE5 1235 aa9.55□□□□□ -0.88
UBE4B-205ENST00000465408 FZD1Q9UP38 647 aa9.55□□□□□ -0.88
UBE4B-205ENST00000465408 MTMR7Q9Y216 660 aa9.55□□□□□ -0.88
UBE4B-205ENST00000465408 V9GY48 417 aaPredicted RBP9.55□□□□□ -0.88
UBE4B-205ENST00000465408 A0A1B0GVL5 298 aa9.54□□□□□ -0.88
UBE4B-205ENST00000465408 ECE2O60344 883 aa9.54□□□□□ -0.88
UBE4B-205ENST00000465408 CCDC192P0DO97 292 aa9.54□□□□□ -0.88
UBE4B-205ENST00000465408 U2AF2P26368 475 aaKnown RBP eCLIP9.54□□□□□ -0.88
UBE4B-205ENST00000465408 NR5A1Q13285 461 aa9.54□□□□□ -0.88
UBE4B-205ENST00000465408 PPP2R5BQ15173 497 aa9.54□□□□□ -0.88
UBE4B-205ENST00000465408 NOSTRINQ8IVI9 506 aa9.54□□□□□ -0.88
UBE4B-205ENST00000465408 PNMA1Q8ND90 353 aa9.54□□□□□ -0.88
UBE4B-205ENST00000465408 ENGASEQ8NFI3 743 aa9.54□□□□□ -0.88
UBE4B-205ENST00000465408 WNK4Q96J92 1243 aa9.54□□□□□ -0.88
UBE4B-205ENST00000465408 DDX4Q9NQI0 724 aaKnown RBP9.54□□□□□ -0.88
UBE4B-205ENST00000465408 SUGT1Q9Y2Z0 365 aa9.54□□□□□ -0.88
UBE4B-205ENST00000465408 PCDHAC2Q9Y5I4 1007 aa9.54□□□□□ -0.88
UBE4B-205ENST00000465408 MRVI1Q9Y6F6 885 aa9.54□□□□□ -0.88
UBE4B-205ENST00000465408 MYH15Q9Y2K3 1946 aa9.54□□□□□ -0.88
UBE4B-205ENST00000465408 DDX60LQ5H9U9 1706 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms