RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 REV3LO60673 3130 aa11.66□□□□□ -0.54
APP-213ENST00000464867 STRNO43815 780 aa11.66□□□□□ -0.54
APP-213ENST00000464867 ALDH1L1O75891 902 aa11.66□□□□□ -0.54
APP-213ENST00000464867 RARBP10826 455 aa11.66□□□□□ -0.54
APP-213ENST00000464867 FGFR2P21802 821 aa11.66□□□□□ -0.54
APP-213ENST00000464867 FAAP100Q0VG06 881 aa11.66□□□□□ -0.54
APP-213ENST00000464867 PPP2R2DQ66LE6 453 aa11.66□□□□□ -0.54
APP-213ENST00000464867 USP17L2Q6R6M4 530 aa11.66□□□□□ -0.54
APP-213ENST00000464867 ANKRD33Q7Z3H0 272 aa11.66□□□□□ -0.54
APP-213ENST00000464867 FAM160A2Q8N612 972 aaPredicted RBP11.66□□□□□ -0.54
APP-213ENST00000464867 NUP133Q8WUM0 1156 aa11.66□□□□□ -0.54
APP-213ENST00000464867 HLA-CQ95604 372 aa11.66□□□□□ -0.54
APP-213ENST00000464867 ABCF2Q9UG63 623 aa11.66□□□□□ -0.54
APP-213ENST00000464867 PRRC2BQ5JSZ5 2229 aaKnown RBP11.66□□□□□ -0.54
APP-213ENST00000464867 GBF1Q92538 1859 aa11.66□□□□□ -0.54
APP-213ENST00000464867 A0A1W2PQ45 241 aaPredicted RBP11.65□□□□□ -0.54
APP-213ENST00000464867 A0A1W2PQY0 241 aa11.65□□□□□ -0.54
APP-213ENST00000464867 USP17L15C9J2P7 530 aa11.65□□□□□ -0.54
APP-213ENST00000464867 USP17L13C9JLJ4 530 aa11.65□□□□□ -0.54
APP-213ENST00000464867 USP17L11C9JVI0 530 aa11.65□□□□□ -0.54
APP-213ENST00000464867 USP17L18D6R9N7 530 aa11.65□□□□□ -0.54
APP-213ENST00000464867 USP17L22D6RA61 530 aa11.65□□□□□ -0.54
APP-213ENST00000464867 USP17L17D6RBQ6 530 aa11.65□□□□□ -0.54
APP-213ENST00000464867 USP17L19D6RCP7 530 aa11.65□□□□□ -0.54
APP-213ENST00000464867 USP17L20D6RJB6 530 aa11.65□□□□□ -0.54
APP-213ENST00000464867 MAP4K4O95819 1239 aaPredicted RBP11.65□□□□□ -0.54
APP-213ENST00000464867 ALADP13716 330 aa11.65□□□□□ -0.54
APP-213ENST00000464867 USP17L24Q0WX57 530 aa11.65□□□□□ -0.54
APP-213ENST00000464867 FAM47AQ5JRC9 791 aa11.65□□□□□ -0.54
APP-213ENST00000464867 RASIP1Q5U651 963 aa11.65□□□□□ -0.54
APP-213ENST00000464867 ZNF365Q70YC5 407 aa11.65□□□□□ -0.54
APP-213ENST00000464867 SUCLG2Q96I99 432 aa11.65□□□□□ -0.54
APP-213ENST00000464867 SRCIN1Q9C0H9 1055 aa11.65□□□□□ -0.54
APP-213ENST00000464867 GINM1Q9NU53 330 aa11.65□□□□□ -0.54
APP-213ENST00000464867 PI4KBQ9UBF8 816 aa11.65□□□□□ -0.54
APP-213ENST00000464867 SMCHD1A6NHR9 2005 aa11.65□□□□□ -0.54
APP-213ENST00000464867 MROH7Q68CQ1 1323 aa11.64□□□□□ -0.55
APP-213ENST00000464867 ZNF521Q96K83 1311 aa11.64□□□□□ -0.55
APP-213ENST00000464867 SLC4A10Q6U841 1118 aa11.64□□□□□ -0.55
APP-213ENST00000464867 C16orf59Q7L2K0 433 aa11.64□□□□□ -0.55
APP-213ENST00000464867 FEZ1Q99689 392 aa11.64□□□□□ -0.55
APP-213ENST00000464867 BICC1Q9H694 974 aaKnown RBP11.64□□□□□ -0.55
APP-213ENST00000464867 STARD7Q9NQZ5 370 aa11.64□□□□□ -0.55
APP-213ENST00000464867 TRANK1O15050 2925 aa11.64□□□□□ -0.55
APP-213ENST00000464867 CHD7Q9P2D1 2997 aa11.64□□□□□ -0.55
APP-213ENST00000464867 MROH7-TTC4A0A0A0MT08 1334 aa11.63□□□□□ -0.55
APP-213ENST00000464867 GPR75-ASB3A0A0A6YYF3 556 aa11.63□□□□□ -0.55
APP-213ENST00000464867 FGBP02675 491 aa11.63□□□□□ -0.55
APP-213ENST00000464867 LDHCP07864 332 aa11.63□□□□□ -0.55
APP-213ENST00000464867 ACRP10323 421 aa11.63□□□□□ -0.55
APP-213ENST00000464867 CSF2RAP15509 400 aa11.63□□□□□ -0.55
APP-213ENST00000464867 ADORA2AP29274 412 aa11.63□□□□□ -0.55
APP-213ENST00000464867 RRP1BQ14684 758 aaKnown RBP11.63□□□□□ -0.55
APP-213ENST00000464867 PRAMEF19Q5SWL8 479 aa11.63□□□□□ -0.55
APP-213ENST00000464867 BRICD5Q6PL45 260 aa11.63□□□□□ -0.55
APP-213ENST00000464867 TRAF7Q6Q0C0 670 aa11.63□□□□□ -0.55
APP-213ENST00000464867 RNF19BQ6ZMZ0 732 aa11.63□□□□□ -0.55
APP-213ENST00000464867 CRACR2BQ8N4Y2 399 aaPredicted RBP11.63□□□□□ -0.55
APP-213ENST00000464867 FBXL18Q96ME1 805 aa11.63□□□□□ -0.55
APP-213ENST00000464867 DHX36Q9H2U1 1008 aaKnown RBP11.63□□□□□ -0.55
APP-213ENST00000464867 PRDM9Q9NQV7 894 aa11.63□□□□□ -0.55
APP-213ENST00000464867 ZDBF2Q9HCK1 2354 aa11.63□□□□□ -0.55
APP-213ENST00000464867 CNMDO75829 334 aa11.62□□□□□ -0.55
APP-213ENST00000464867 PGK1P00558 417 aa11.62□□□□□ -0.55
APP-213ENST00000464867 IGHA2P01877 340 aa11.62□□□□□ -0.55
APP-213ENST00000464867 RHBDL3P58872 404 aa11.62□□□□□ -0.55
APP-213ENST00000464867 GSTO1P78417 241 aa11.62□□□□□ -0.55
APP-213ENST00000464867 RABL6Q3YEC7 729 aaPredicted RBP11.62□□□□□ -0.55
APP-213ENST00000464867 ZNF598Q86UK7 904 aaKnown RBP11.62□□□□□ -0.55
APP-213ENST00000464867 KLHDC4Q8TBB5 520 aa11.62□□□□□ -0.55
APP-213ENST00000464867 KAZALD1Q96I82 304 aa11.62□□□□□ -0.55
APP-213ENST00000464867 TSEN34Q9BSV6 310 aaKnown RBP11.62□□□□□ -0.55
APP-213ENST00000464867 TBX21Q9UL17 535 aa11.62□□□□□ -0.55
APP-213ENST00000464867 YBX2Q9Y2T7 364 aaKnown RBP11.62□□□□□ -0.55
APP-213ENST00000464867 EYA2O00167 538 aa11.61□□□□□ -0.55
APP-213ENST00000464867 TLR3O15455 904 aaKnown RBP11.61□□□□□ -0.55
APP-213ENST00000464867 NBPF7P0C2Y1 421 aaPredicted RBP11.61□□□□□ -0.55
APP-213ENST00000464867 POU3F3P20264 500 aaPredicted RBP11.61□□□□□ -0.55
APP-213ENST00000464867 SSTR3P32745 418 aaPredicted RBP11.61□□□□□ -0.55
APP-213ENST00000464867 USP14P54578 494 aa11.61□□□□□ -0.55
APP-213ENST00000464867 ATP2B3Q16720 1220 aa11.61□□□□□ -0.55
APP-213ENST00000464867 CATSPERGQ6ZRH7 1159 aa11.61□□□□□ -0.55
APP-213ENST00000464867 ERICH6Q7L0X2 663 aa11.61□□□□□ -0.55
APP-213ENST00000464867 FOXP4Q8IVH2 680 aaPredicted RBP11.61□□□□□ -0.55
APP-213ENST00000464867 VTI1AQ96AJ9 217 aa11.61□□□□□ -0.55
APP-213ENST00000464867 NOL10Q9BSC4 688 aaKnown RBP11.61□□□□□ -0.55
APP-213ENST00000464867 IL23AQ9NPF7 189 aa11.61□□□□□ -0.55
APP-213ENST00000464867 NRBP1Q9UHY1 535 aa11.61□□□□□ -0.55
APP-213ENST00000464867 SALL2Q9Y467 1007 aaPredicted RBP11.61□□□□□ -0.55
APP-213ENST00000464867 MTCH2Q9Y6C9 303 aa11.61□□□□□ -0.55
APP-213ENST00000464867 MOXD2PA6NHM9 499 aa11.6□□□□□ -0.55
APP-213ENST00000464867 ACLYP53396 1101 aa11.6□□□□□ -0.55
APP-213ENST00000464867 ZYXQ15942 572 aaKnown RBP11.6□□□□□ -0.55
APP-213ENST00000464867 LBX2Q6XYB7 198 aa11.6□□□□□ -0.55
APP-213ENST00000464867 TEX11Q8IYF3 940 aa11.6□□□□□ -0.55
APP-213ENST00000464867 GJD3Q8N144 294 aa11.6□□□□□ -0.55
APP-213ENST00000464867 GLT1D1Q96MS3 346 aa11.6□□□□□ -0.55
APP-213ENST00000464867 PPP1R12CQ9BZL4 782 aa11.6□□□□□ -0.55
APP-213ENST00000464867 BTBD7Q9P203 1132 aa11.6□□□□□ -0.55
APP-213ENST00000464867 CEP126Q9P2H0 1117 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms