RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 IRAK1P51617 712 aa14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 ATP2C1P98194 919 aaPredicted RBP14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 ZNF658Q5TYW1 1059 aaPredicted RBP14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 GIGYF2Q6Y7W6 1299 aaKnown RBP14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 CTCFLQ8NI51 663 aaPredicted RBP14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 KAT2BQ92831 832 aa14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 TNFRSF25Q93038 417 aa14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 LRP2BPQ9P2M1 347 aa14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 SAMM50Q9Y512 469 aa14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 C1orf167Q5SNV9 1468 aa14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 GOLGA6CA6NDK9 693 aa14.12□□□□□ -0.15
CLCNKA-204ENST00000464764 TUBBP07437 444 aa14.12□□□□□ -0.15
CLCNKA-204ENST00000464764 GOLGA6DP0CG33 693 aa14.12□□□□□ -0.15
CLCNKA-204ENST00000464764 XBP1P17861 261 aa14.12□□□□□ -0.15
CLCNKA-204ENST00000464764 FGFR2P21802 821 aa14.12□□□□□ -0.15
CLCNKA-204ENST00000464764 CXCR5P32302 372 aa14.12□□□□□ -0.15
CLCNKA-204ENST00000464764 PPARDQ03181 441 aa14.12□□□□□ -0.15
CLCNKA-204ENST00000464764 SND1Q7KZF4 910 aaKnown RBP eCLIP14.12□□□□□ -0.15
CLCNKA-204ENST00000464764 GOLGA6AQ9NYA3 693 aa14.12□□□□□ -0.15
CLCNKA-204ENST00000464764 GTPBP6O43824 516 aaPredicted RBP14.12□□□□□ -0.15
CLCNKA-204ENST00000464764 IDEP14735 1019 aa14.12□□□□□ -0.15
CLCNKA-204ENST00000464764 TMTC2Q8N394 836 aa14.12□□□□□ -0.15
CLCNKA-204ENST00000464764 FAM76AQ8TAV0 307 aa14.12□□□□□ -0.15
CLCNKA-204ENST00000464764 RASGRP4Q8TDF6 673 aa14.12□□□□□ -0.15
CLCNKA-204ENST00000464764 DNAJC7Q99615 494 aa14.12□□□□□ -0.15
CLCNKA-204ENST00000464764 LRRC1Q9BTT6 524 aa14.12□□□□□ -0.15
CLCNKA-204ENST00000464764 ABCF2Q9UG63 623 aa14.12□□□□□ -0.15
CLCNKA-204ENST00000464764 KIF1AQ12756 1690 aa14.12□□□□□ -0.15
CLCNKA-204ENST00000464764 GOLGA6BA6NDN3 693 aa14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 SPAG1Q07617 926 aa14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 MAP9Q49MG5 647 aa14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 TADA2BQ86TJ2 420 aa14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 ZNF507Q8TCN5 953 aa14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 LRP6O75581 1613 aa14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 KCPQ6ZWJ8 1503 aa14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 PCDH11XQ9BZA7 1347 aa14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 PCDH11YQ9BZA8 1340 aa14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 NID2Q14112 1375 aa14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 TSR1Q2NL82 804 aaKnown RBP14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 IFIT1BQ5T764 474 aaKnown RBP14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 SRBD1Q8N5C6 995 aaKnown RBP14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 NHEJ1Q9H9Q4 299 aaPredicted RBP14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 LGALS16A8MUM7 142 aa14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 ZNF263O14978 683 aa14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 PRPF3O43395 683 aaKnown RBP14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 CYP7A1P22680 504 aa14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 EIF5P55010 431 aaKnown RBP14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 TRIM14Q14142 442 aa14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 FBXW10Q5XX13 1052 aa14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 ZSCAN10Q96SZ4 725 aaPredicted RBP14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 CAPN11Q9UMQ6 739 aa14.11□□□□□ -0.15
CLCNKA-204ENST00000464764 TRPM3Q9HCF6 1732 aaPredicted RBP14.1□□□□□ -0.15
CLCNKA-204ENST00000464764 ERCC3P19447 782 aa14.1□□□□□ -0.15
CLCNKA-204ENST00000464764 TRIM21P19474 475 aaKnown RBP14.1□□□□□ -0.15
CLCNKA-204ENST00000464764 DYNLL1P63167 89 aaKnown RBP14.1□□□□□ -0.15
CLCNKA-204ENST00000464764 SLC4A8Q2Y0W8 1093 aa14.1□□□□□ -0.15
CLCNKA-204ENST00000464764 ADSSL1Q8N142 457 aa14.1□□□□□ -0.15
CLCNKA-204ENST00000464764 BCAS4Q8TDM0 211 aa14.1□□□□□ -0.15
CLCNKA-204ENST00000464764 TRIM47Q96LD4 638 aa14.1□□□□□ -0.15
CLCNKA-204ENST00000464764 PCMTD1Q96MG8 357 aaPredicted RBP14.1□□□□□ -0.15
CLCNKA-204ENST00000464764 MLXIPQ9HAP2 919 aa14.1□□□□□ -0.15
CLCNKA-204ENST00000464764 NLRP5P59047 1200 aa14.1□□□□□ -0.15
CLCNKA-204ENST00000464764 TROAPQ12815 778 aa14.1□□□□□ -0.15
CLCNKA-204ENST00000464764 ESR2Q92731 530 aa14.1□□□□□ -0.15
CLCNKA-204ENST00000464764 ARL8AQ96BM9 186 aa14.1□□□□□ -0.15
CLCNKA-204ENST00000464764 LRWD1Q9UFC0 647 aa14.1□□□□□ -0.15
CLCNKA-204ENST00000464764 FAM169AQ9Y6X4 670 aa14.1□□□□□ -0.15
CLCNKA-204ENST00000464764 H7C1D1 291 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 KRT86O43790 486 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 STAT6P42226 847 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 CATIPQ7Z7H3 387 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 EFCAB13Q8IY85 973 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 GPATCH11Q8N954 259 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 TSEN2Q8NCE0 465 aaKnown RBP14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 RASSF8Q8NHQ8 419 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 LRRC15Q8TF66 581 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 BCL9LQ86UU0 1499 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 LOC102724159A0A0B4J2E5 919 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 SLC5A1P13866 664 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 GUCY2CP25092 1073 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 GNGT1P63211 74 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 PWP2Q15269 919 aaKnown RBP14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 NAALADL2Q58DX5 795 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 CREG2Q8IUH2 290 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 ANKRD13CQ8N6S4 541 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 RNF41Q9H4P4 317 aaPredicted RBP14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 CAPN6Q9Y6Q1 641 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 A0A087WUV0 522 aaPredicted RBP14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 TARSL2A2RTX5 802 aaKnown RBP14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 KCTD19Q17RG1 926 aaPredicted RBP14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 FAM47AQ5JRC9 791 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 KCTD16Q68DU8 428 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 SH2D3CQ8N5H7 860 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 PIGBQ92521 554 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 CAPS2Q9BXY5 557 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 BRMS1Q9HCU9 246 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 TMOD3Q9NYL9 352 aa14.09□□□□□ -0.15
CLCNKA-204ENST00000464764 PDE8AO60658 829 aa14.08□□□□□ -0.16
CLCNKA-204ENST00000464764 SHOX2O60902 331 aaPredicted RBP14.08□□□□□ -0.16
CLCNKA-204ENST00000464764 KRT83P78385 493 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms