RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 KRTAP10-2P60368 255 aa6.76□□□□□ -1.33
USH2A-203ENST00000463147 RAD51AP2Q09MP3 1159 aa6.76□□□□□ -1.33
USH2A-203ENST00000463147 TMEFF1Q8IYR6 380 aa6.76□□□□□ -1.33
USH2A-203ENST00000463147 HHIPL1Q96JK4 782 aa6.76□□□□□ -1.33
USH2A-203ENST00000463147 KRTAP9-8Q9BYQ0 159 aa6.76□□□□□ -1.33
USH2A-203ENST00000463147 TLR6Q9Y2C9 796 aa6.76□□□□□ -1.33
USH2A-203ENST00000463147 TAF6LQ9Y6J9 622 aa6.76□□□□□ -1.33
USH2A-203ENST00000463147 CHURC1-FNTBB4DL54 471 aa6.75□□□□□ -1.33
USH2A-203ENST00000463147 RGS13O14921 159 aa6.75□□□□□ -1.33
USH2A-203ENST00000463147 HTR3BO95264 441 aa6.75□□□□□ -1.33
USH2A-203ENST00000463147 CAMK2GQ13555 558 aaPredicted RBP6.75□□□□□ -1.33
USH2A-203ENST00000463147 PWP1Q13610 501 aa6.75□□□□□ -1.33
USH2A-203ENST00000463147 LDHDQ86WU2 507 aa6.75□□□□□ -1.33
USH2A-203ENST00000463147 PWWP2AQ96N64 755 aa6.75□□□□□ -1.33
USH2A-203ENST00000463147 PALD1Q9ULE6 856 aa6.75□□□□□ -1.33
USH2A-203ENST00000463147 MYRFQ9Y2G1 1151 aa6.75□□□□□ -1.33
USH2A-203ENST00000463147 TMEM82A0PJX8 343 aa6.74□□□□□ -1.33
USH2A-203ENST00000463147 KCNC1P48547 511 aa6.74□□□□□ -1.33
USH2A-203ENST00000463147 EAF1Q96JC9 268 aaPredicted RBP6.74□□□□□ -1.33
USH2A-203ENST00000463147 KIF2CQ99661 725 aa6.74□□□□□ -1.33
USH2A-203ENST00000463147 KLHL14Q9P2G3 628 aa6.74□□□□□ -1.33
USH2A-203ENST00000463147 A0A1W2PQ45 241 aaPredicted RBP6.73□□□□□ -1.33
USH2A-203ENST00000463147 A0A1W2PQY0 241 aa6.73□□□□□ -1.33
USH2A-203ENST00000463147 SYPP08247 313 aa6.73□□□□□ -1.33
USH2A-203ENST00000463147 ZNF16P17020 682 aaPredicted RBP6.73□□□□□ -1.33
USH2A-203ENST00000463147 PFKLP17858 780 aa6.73□□□□□ -1.33
USH2A-203ENST00000463147 CBX2Q14781 532 aaPredicted RBP6.73□□□□□ -1.33
USH2A-203ENST00000463147 RAB3GAP1Q15042 981 aa6.73□□□□□ -1.33
USH2A-203ENST00000463147 VMACQ2NL98 169 aa6.73□□□□□ -1.33
USH2A-203ENST00000463147 ZFYVE27Q5T4F4 411 aa6.73□□□□□ -1.33
USH2A-203ENST00000463147 MEI1Q5TIA1 1274 aa6.73□□□□□ -1.33
USH2A-203ENST00000463147 BNC2Q6ZN30 1099 aaPredicted RBP6.73□□□□□ -1.33
USH2A-203ENST00000463147 TMC6Q7Z403 805 aa6.73□□□□□ -1.33
USH2A-203ENST00000463147 IGDCC3Q8IVU1 814 aa6.73□□□□□ -1.33
USH2A-203ENST00000463147 DUSP9Q99956 384 aaKnown RBP6.73□□□□□ -1.33
USH2A-203ENST00000463147 USP31Q70CQ4 1352 aa6.72□□□□□ -1.33
USH2A-203ENST00000463147 FADS2P1A8MWK0 482 aa6.72□□□□□ -1.33
USH2A-203ENST00000463147 EFEMP2O95967 443 aa6.72□□□□□ -1.33
USH2A-203ENST00000463147 F13A1P00488 732 aa6.72□□□□□ -1.33
USH2A-203ENST00000463147 CYP4F8P98187 520 aa6.72□□□□□ -1.33
USH2A-203ENST00000463147 MPP2Q14168 576 aa6.72□□□□□ -1.33
USH2A-203ENST00000463147 NR1I3Q14994 352 aa6.72□□□□□ -1.33
USH2A-203ENST00000463147 NBPF9Q3BBW0 867 aa6.72□□□□□ -1.33
USH2A-203ENST00000463147 HSF5Q4G112 596 aaPredicted RBP6.72□□□□□ -1.33
USH2A-203ENST00000463147 RELL1Q8IUW5 271 aa6.72□□□□□ -1.33
USH2A-203ENST00000463147 BDH2Q9BUT1 245 aa6.72□□□□□ -1.33
USH2A-203ENST00000463147 PCDHA5Q9Y5H7 936 aa6.72□□□□□ -1.33
USH2A-203ENST00000463147 BUB1BO60566 1050 aaPredicted RBP6.71□□□□□ -1.34
USH2A-203ENST00000463147 RAG1P15918 1043 aa6.71□□□□□ -1.34
USH2A-203ENST00000463147 TAGLNQ01995 201 aaKnown RBP6.71□□□□□ -1.34
USH2A-203ENST00000463147 TARBP2Q15633 366 aaKnown RBP6.71□□□□□ -1.34
USH2A-203ENST00000463147 BBS9Q3SYG4 887 aa6.71□□□□□ -1.34
USH2A-203ENST00000463147 EAPPQ56P03 285 aaPredicted RBP6.71□□□□□ -1.34
USH2A-203ENST00000463147 SYT8Q8NBV8 401 aa6.71□□□□□ -1.34
USH2A-203ENST00000463147 MRRFQ96E11 262 aaKnown RBP6.71□□□□□ -1.34
USH2A-203ENST00000463147 GPR20Q99678 358 aa6.71□□□□□ -1.34
USH2A-203ENST00000463147 PLCD4Q9BRC7 762 aa6.71□□□□□ -1.34
USH2A-203ENST00000463147 ADAM7Q9H2U9 754 aa6.71□□□□□ -1.34
USH2A-203ENST00000463147 SIGLEC6O43699 453 aa6.7□□□□□ -1.34
USH2A-203ENST00000463147 FKTNO75072 461 aa6.7□□□□□ -1.34
USH2A-203ENST00000463147 PF4P02776 101 aa6.7□□□□□ -1.34
USH2A-203ENST00000463147 SDHBP21912 280 aa6.7□□□□□ -1.34
USH2A-203ENST00000463147 ITGAEP38570 1179 aa6.7□□□□□ -1.34
USH2A-203ENST00000463147 CCNFP41002 786 aa6.7□□□□□ -1.34
USH2A-203ENST00000463147 NBPF12Q5TAG4 269 aaPredicted RBP6.7□□□□□ -1.34
USH2A-203ENST00000463147 ACSL6Q9UKU0 697 aa6.7□□□□□ -1.34
USH2A-203ENST00000463147 ANKRD33BA6NCL7 494 aa6.69□□□□□ -1.34
USH2A-203ENST00000463147 K7ESM1 405 aa6.69□□□□□ -1.34
USH2A-203ENST00000463147 PRKCAP17252 672 aa6.69□□□□□ -1.34
USH2A-203ENST00000463147 PSMD2Q13200 908 aa6.69□□□□□ -1.34
USH2A-203ENST00000463147 REC114Q7Z4M0 266 aa6.69□□□□□ -1.34
USH2A-203ENST00000463147 RHOVQ96L33 236 aa6.69□□□□□ -1.34
USH2A-203ENST00000463147 TMEM74Q96NL1 305 aa6.69□□□□□ -1.34
USH2A-203ENST00000463147 RSRP1Q9BUV0 290 aa6.69□□□□□ -1.34
USH2A-203ENST00000463147 TNFRSF12AQ9NP84 129 aa6.69□□□□□ -1.34
USH2A-203ENST00000463147 GPR55Q9Y2T6 319 aaPredicted RBP6.69□□□□□ -1.34
USH2A-203ENST00000463147 POLR3KQ9Y2Y1 108 aaPredicted RBP6.69□□□□□ -1.34
USH2A-203ENST00000463147 ROBO2Q9HCK4 1378 aa6.69□□□□□ -1.34
USH2A-203ENST00000463147 NUDT19A8MXV4 375 aa6.68□□□□□ -1.34
USH2A-203ENST00000463147 GRIN3BO60391 1043 aa6.68□□□□□ -1.34
USH2A-203ENST00000463147 ERCC3P19447 782 aa6.68□□□□□ -1.34
USH2A-203ENST00000463147 MAPKAPK2P49137 400 aa6.68□□□□□ -1.34
USH2A-203ENST00000463147 ZNF827Q17R98 1081 aa6.68□□□□□ -1.34
USH2A-203ENST00000463147 UBXN11Q5T124 520 aa6.68□□□□□ -1.34
USH2A-203ENST00000463147 ZC3H14Q6PJT7 736 aaKnown RBP6.68□□□□□ -1.34
USH2A-203ENST00000463147 TMC3Q7Z5M5 1100 aa6.68□□□□□ -1.34
USH2A-203ENST00000463147 SLCO6A1Q86UG4 719 aa6.68□□□□□ -1.34
USH2A-203ENST00000463147 TP53I13Q8NBR0 393 aaPredicted RBP6.68□□□□□ -1.34
USH2A-203ENST00000463147 NUP43Q8NFH3 380 aa6.68□□□□□ -1.34
USH2A-203ENST00000463147 BCL2L13Q9BXK5 485 aa6.68□□□□□ -1.34
USH2A-203ENST00000463147 IRS2Q9Y4H2 1338 aa6.68□□□□□ -1.34
USH2A-203ENST00000463147 UBOX5O94941 541 aa6.67□□□□□ -1.34
USH2A-203ENST00000463147 PRAMEF1O95521 474 aa6.67□□□□□ -1.34
USH2A-203ENST00000463147 INSRRP14616 1297 aa6.67□□□□□ -1.34
USH2A-203ENST00000463147 GBP2P32456 591 aaPredicted RBP6.67□□□□□ -1.34
USH2A-203ENST00000463147 BMP8BP34820 402 aa6.67□□□□□ -1.34
USH2A-203ENST00000463147 SLURP1P55000 103 aa6.67□□□□□ -1.34
USH2A-203ENST00000463147 DAB2P98082 770 aa6.67□□□□□ -1.34
USH2A-203ENST00000463147 RTP5Q14D33 572 aa6.67□□□□□ -1.34
USH2A-203ENST00000463147 ARSHQ5FYA8 562 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms