RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 LPIN2Q92539 896 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 ZNF512BQ96KM6 892 aaPredicted RBP6.69□□□□□ -1.34
CLK1-207ENST00000461981 SRCIN1Q9C0H9 1055 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 GPR108Q9NPR9 543 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 ORC3Q9UBD5 711 aaPredicted RBP6.69□□□□□ -1.34
CLK1-207ENST00000461981 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.69□□□□□ -1.34
CLK1-207ENST00000461981 MRFAP1Q9Y605 127 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 CTNND1O60716 968 aaKnown RBP6.69□□□□□ -1.34
CLK1-207ENST00000461981 PHACTR2O75167 634 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 OATP04181 439 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 LDHCP07864 332 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 MOGSQ13724 837 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 GNL2Q13823 731 aaKnown RBP6.69□□□□□ -1.34
CLK1-207ENST00000461981 CCDC144BQ3MJ40 725 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 NYAP1Q6ZVC0 841 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 MYLK4Q86YV6 388 aaPredicted RBP6.69□□□□□ -1.34
CLK1-207ENST00000461981 CCDC144CPQ8IYA2 1237 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 ARHGAP45Q92619 1136 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 FAM84BQ96KN1 310 aaPredicted RBP6.69□□□□□ -1.34
CLK1-207ENST00000461981 WDR18Q9BV38 432 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 PAK6Q9NQU5 681 aaPredicted RBP6.69□□□□□ -1.34
CLK1-207ENST00000461981 TSKSQ9UJT2 592 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 PPFIA2O75334 1257 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 MX1P20591 662 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 NAA25Q14CX7 972 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 LBX2Q6XYB7 198 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 UBE3BQ7Z3V4 1068 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 SCYL3Q8IZE3 742 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 C3orf20Q8ND61 904 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 SOCS4Q8WXH5 440 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 TMX3Q96JJ7 454 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 CLIP2Q9UDT6 1046 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 PDE8BO95263 885 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 MTX1Q13505 466 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 VGLL4Q14135 290 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 FAM110CQ1W6H9 321 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 MYSM1Q5VVJ2 828 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 CC2D1AQ6P1N0 951 aaPredicted RBP6.68□□□□□ -1.34
CLK1-207ENST00000461981 STAG1Q8WVM7 1258 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 PRMT6Q96LA8 375 aaPredicted RBP6.68□□□□□ -1.34
CLK1-207ENST00000461981 PTPN18Q99952 460 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 CRACR2AQ9BSW2 395 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 BICC1Q9H694 974 aaKnown RBP6.68□□□□□ -1.34
CLK1-207ENST00000461981 AS3MTQ9HBK9 375 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 LMCD1Q9NZU5 365 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 LTBP2Q14767 1821 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 ALPK3Q96L96 1907 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 PLCG2P16885 1265 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 GRK4P32298 578 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 MCM6Q14566 821 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 CRYMQ14894 314 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 ZKSCAN4Q969J2 545 aaPredicted RBP6.68□□□□□ -1.34
CLK1-207ENST00000461981 C12orf42Q96LP6 360 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 TACO1Q9BSH4 297 aaKnown RBP6.68□□□□□ -1.34
CLK1-207ENST00000461981 CHCHD3Q9NX63 227 aaKnown RBP6.68□□□□□ -1.34
CLK1-207ENST00000461981 HERC5Q9UII4 1024 aaKnown RBP6.68□□□□□ -1.34
CLK1-207ENST00000461981 AKAP2Q9Y2D5 859 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 STXBP5LQ9Y2K9 1186 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.68□□□□□ -1.34
CLK1-207ENST00000461981 PTCH2Q9Y6C5 1203 aa6.68□□□□□ -1.34
CLK1-207ENST00000461981 SGSM2O43147 1006 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 MSCO60682 206 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 SGPL1O95470 568 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 COPB2P35606 906 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 MFSD14BQ5SR56 506 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 NBPF12Q5TAG4 269 aaPredicted RBP6.67□□□□□ -1.34
CLK1-207ENST00000461981 HHATQ5VTY9 493 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 C1orf53Q5VUE5 145 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 IQCA1Q86XH1 822 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 SHISA4Q96DD7 197 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 ZNF396Q96N95 335 aaPredicted RBP6.67□□□□□ -1.34
CLK1-207ENST00000461981 PDE11AQ9HCR9 933 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 TTF2Q9UNY4 1162 aaKnown RBP6.67□□□□□ -1.34
CLK1-207ENST00000461981 AGTPBP1Q9UPW5 1226 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 GOLGA6CA6NDK9 693 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 GOLGA6BA6NDN3 693 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 C19orf81C9J6K1 198 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 BTBD19C9JJ37 291 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 ST18O60284 1047 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 N4BP1O75113 896 aaKnown RBP6.67□□□□□ -1.34
CLK1-207ENST00000461981 SLC4A2P04920 1241 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 GOLGA6DP0CG33 693 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 HOXA7P31268 230 aaPredicted RBP6.67□□□□□ -1.34
CLK1-207ENST00000461981 RANBP1P43487 201 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 LDHAL6AQ6ZMR3 332 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 SPDYE1Q8NFV5 336 aaPredicted RBP6.67□□□□□ -1.34
CLK1-207ENST00000461981 IRX2Q9BZI1 471 aaPredicted RBP6.67□□□□□ -1.34
CLK1-207ENST00000461981 TANGO6Q9C0B7 1094 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 ARFGAP3Q9NP61 516 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 GOLGA6AQ9NYA3 693 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 FAN1Q9Y2M0 1017 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 A0A1B0GUA9 196 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 MYO1FO00160 1098 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 PYGBP11216 843 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 OSBPP22059 807 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 ACTN3Q08043 901 aaPredicted RBP6.67□□□□□ -1.34
CLK1-207ENST00000461981 SNW1Q13573 536 aaKnown RBP6.67□□□□□ -1.34
CLK1-207ENST00000461981 ZRSR2Q15696 482 aaKnown RBP6.67□□□□□ -1.34
CLK1-207ENST00000461981 NEUROD2Q15784 382 aa6.67□□□□□ -1.34
CLK1-207ENST00000461981 APOBEC3HQ6NTF7 200 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms