RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 BECN1Q14457 450 aa8.85□□□□□ -0.99
ABCA4-202ENST00000460514 SHROOM1Q2M3G4 852 aaPredicted RBP8.85□□□□□ -0.99
ABCA4-202ENST00000460514 ASPRV1Q53RT3 343 aa8.85□□□□□ -0.99
ABCA4-202ENST00000460514 SH3D19Q5HYK7 790 aa8.85□□□□□ -0.99
ABCA4-202ENST00000460514 GPATCH4Q5T3I0 446 aaKnown RBP8.85□□□□□ -0.99
ABCA4-202ENST00000460514 SPRYD7Q5W111 196 aa8.85□□□□□ -0.99
ABCA4-202ENST00000460514 SLFN13Q68D06 897 aa8.85□□□□□ -0.99
ABCA4-202ENST00000460514 CPLX2Q6PUV4 134 aaKnown RBP8.85□□□□□ -0.99
ABCA4-202ENST00000460514 APOA5Q6Q788 366 aa8.85□□□□□ -0.99
ABCA4-202ENST00000460514 CLEC10AQ8IUN9 316 aa8.85□□□□□ -0.99
ABCA4-202ENST00000460514 PROCA1Q8NCQ7 364 aaPredicted RBP8.85□□□□□ -0.99
ABCA4-202ENST00000460514 NKX2-3Q8TAU0 364 aa8.85□□□□□ -0.99
ABCA4-202ENST00000460514 ACER1Q8TDN7 264 aa8.85□□□□□ -0.99
ABCA4-202ENST00000460514 NUP133Q8WUM0 1156 aa8.85□□□□□ -0.99
ABCA4-202ENST00000460514 SNX21Q969T3 373 aa8.85□□□□□ -0.99
ABCA4-202ENST00000460514 GMCL1Q96IK5 515 aa8.85□□□□□ -0.99
ABCA4-202ENST00000460514 C12orf42Q96LP6 360 aa8.85□□□□□ -0.99
ABCA4-202ENST00000460514 LZTS2Q9BRK4 669 aa8.85□□□□□ -0.99
ABCA4-202ENST00000460514 SLKQ9H2G2 1235 aaPredicted RBP8.85□□□□□ -0.99
ABCA4-202ENST00000460514 RBM28Q9NW13 759 aaKnown RBP8.85□□□□□ -0.99
ABCA4-202ENST00000460514 ISY1Q9ULR0 285 aaKnown RBP8.85□□□□□ -0.99
ABCA4-202ENST00000460514 KCNH4Q9UQ05 1017 aa8.85□□□□□ -0.99
ABCA4-202ENST00000460514 A0A0G2JLL6 359 aaPredicted RBP8.84□□□□□ -0.99
ABCA4-202ENST00000460514 A0A1W2PRG0 241 aa8.84□□□□□ -0.99
ABCA4-202ENST00000460514 MANSC4A6NHS7 340 aaPredicted RBP8.84□□□□□ -0.99
ABCA4-202ENST00000460514 RASSF10A6NK89 507 aa8.84□□□□□ -0.99
ABCA4-202ENST00000460514 GOLGA8AA7E2F4 631 aa8.84□□□□□ -0.99
ABCA4-202ENST00000460514 NDUFB10O96000 172 aa8.84□□□□□ -0.99
ABCA4-202ENST00000460514 SLC10A3P09131 477 aa8.84□□□□□ -0.99
ABCA4-202ENST00000460514 BMP3P12645 472 aa8.84□□□□□ -0.99
ABCA4-202ENST00000460514 METAP2P50579 478 aaKnown RBP eCLIP8.84□□□□□ -0.99
ABCA4-202ENST00000460514 INHBEP58166 350 aa8.84□□□□□ -0.99
ABCA4-202ENST00000460514 SREBF2Q12772 1141 aa8.84□□□□□ -0.99
ABCA4-202ENST00000460514 ZYXQ15942 572 aaKnown RBP8.84□□□□□ -0.99
ABCA4-202ENST00000460514 RTN1Q16799 776 aa8.84□□□□□ -0.99
ABCA4-202ENST00000460514 CCDC96Q2M329 555 aa8.84□□□□□ -0.99
ABCA4-202ENST00000460514 DEFB115Q30KQ5 88 aa8.84□□□□□ -0.99
ABCA4-202ENST00000460514 PRRT2Q7Z6L0 340 aaPredicted RBP8.84□□□□□ -0.99
ABCA4-202ENST00000460514 CCDC84Q86UT8 332 aaPredicted RBP8.84□□□□□ -0.99
ABCA4-202ENST00000460514 MICU3Q86XE3 530 aa8.84□□□□□ -0.99
ABCA4-202ENST00000460514 RASAL3Q86YV0 1011 aa8.84□□□□□ -0.99
ABCA4-202ENST00000460514 SIAH1Q8IUQ4 282 aa8.84□□□□□ -0.99
ABCA4-202ENST00000460514 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.84□□□□□ -0.99
ABCA4-202ENST00000460514 MTMR7Q9Y216 660 aa8.84□□□□□ -0.99
ABCA4-202ENST00000460514 PHIPQ8WWQ0 1821 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 CPLX1O14810 134 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 PFKFB2O60825 505 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 CDKL5O76039 1030 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 SNHG28P0DPA3 235 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 PDHBP11177 359 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 PDIA3P30101 505 aaKnown RBP8.83□□□□□ -1
ABCA4-202ENST00000460514 HMGCS2P54868 508 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 TROAPQ12815 778 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 IKQ13123 557 aaPredicted RBP8.83□□□□□ -1
ABCA4-202ENST00000460514 NOGQ13253 232 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 COL9A3Q14050 684 aaPredicted RBP8.83□□□□□ -1
ABCA4-202ENST00000460514 GRM4Q14833 912 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 OTUD7BQ6GQQ9 843 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 GADL1Q6ZQY3 521 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 NOL8Q76FK4 1167 aaKnown RBP8.83□□□□□ -1
ABCA4-202ENST00000460514 FAM160B2Q86V87 743 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 FANCBQ8NB91 859 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 CHURC1Q8WUH1 139 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 ZNF775Q96BV0 537 aaPredicted RBP8.83□□□□□ -1
ABCA4-202ENST00000460514 GPHNQ9NQX3 736 aaPredicted RBP8.83□□□□□ -1
ABCA4-202ENST00000460514 FEM1BQ9UK73 627 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 PNMA3Q9UL41 463 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 BRPF3Q9ULD4 1205 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 TPCN1Q9ULQ1 816 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 PCDHGA4Q9Y5G9 962 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 NID2Q14112 1375 aa8.83□□□□□ -1
ABCA4-202ENST00000460514 CCL15-CCL14A0A0B4J2E2 113 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 USP17L15C9J2P7 530 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 USP17L13C9JLJ4 530 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 USP17L11C9JVI0 530 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 USP17L18D6R9N7 530 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 USP17L22D6RA61 530 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 USP17L17D6RBQ6 530 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 USP17L19D6RCP7 530 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 USP17L20D6RJB6 530 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 K7ELQ4 463 aaPredicted RBP8.82□□□□□ -1
ABCA4-202ENST00000460514 PLA2G6O60733 806 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 FDX1P10109 184 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 VCAM1P19320 739 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 OSBPP22059 807 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 SMARCA1P28370 1054 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 GJA5P36382 358 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 STAT2P52630 851 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 C1QTNF8P60827 252 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 ZNF543Q08ER8 600 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 USP17L24Q0WX57 530 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 CCL15Q16663 113 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 ZNF787Q6DD87 383 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 SPICE1Q8N0Z3 855 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 GTF3C2Q8WUA4 911 aaPredicted RBP8.82□□□□□ -1
ABCA4-202ENST00000460514 MYL10Q9BUA6 226 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 TANGO6Q9C0B7 1094 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 RPAP3Q9H6T3 665 aaPredicted RBP8.82□□□□□ -1
ABCA4-202ENST00000460514 SENP2Q9HC62 589 aa8.82□□□□□ -1
ABCA4-202ENST00000460514 ZCCHC17Q9NP64 241 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms