RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 FCRL2Q96LA5 508 aaPredicted RBP4.39□□□□□ -1.71
LINC02540-201ENST00000455554 GPR20Q99678 358 aa4.39□□□□□ -1.71
LINC02540-201ENST00000455554 PLA2G2DQ9UNK4 145 aa4.39□□□□□ -1.71
LINC02540-201ENST00000455554 MINPP1Q9UNW1 487 aa4.39□□□□□ -1.71
LINC02540-201ENST00000455554 MYRFQ9Y2G1 1151 aa4.39□□□□□ -1.71
LINC02540-201ENST00000455554 FADS2P1A8MWK0 482 aa4.38□□□□□ -1.71
LINC02540-201ENST00000455554 NUDT19A8MXV4 375 aa4.38□□□□□ -1.71
LINC02540-201ENST00000455554 FFAR3O14843 346 aa4.38□□□□□ -1.71
LINC02540-201ENST00000455554 F13A1P00488 732 aa4.38□□□□□ -1.71
LINC02540-201ENST00000455554 KCNC1P48547 511 aa4.38□□□□□ -1.71
LINC02540-201ENST00000455554 CAP1Q01518 475 aa4.38□□□□□ -1.71
LINC02540-201ENST00000455554 LMNB2Q03252 620 aa4.38□□□□□ -1.71
LINC02540-201ENST00000455554 CAMK2GQ13555 558 aaPredicted RBP4.38□□□□□ -1.71
LINC02540-201ENST00000455554 ZFYVE27Q5T4F4 411 aa4.38□□□□□ -1.71
LINC02540-201ENST00000455554 HHIPL2Q6UWX4 724 aa4.38□□□□□ -1.71
LINC02540-201ENST00000455554 TMC3Q7Z5M5 1100 aa4.38□□□□□ -1.71
LINC02540-201ENST00000455554 ADGRG2Q8IZP9 1017 aa4.38□□□□□ -1.71
LINC02540-201ENST00000455554 NLGN1Q8N2Q7 840 aa4.38□□□□□ -1.71
LINC02540-201ENST00000455554 CNOT11Q9UKZ1 510 aaKnown RBP4.38□□□□□ -1.71
LINC02540-201ENST00000455554 PALD1Q9ULE6 856 aa4.38□□□□□ -1.71
LINC02540-201ENST00000455554 GPR55Q9Y2T6 319 aaPredicted RBP4.38□□□□□ -1.71
LINC02540-201ENST00000455554 POLR3KQ9Y2Y1 108 aaPredicted RBP4.38□□□□□ -1.71
LINC02540-201ENST00000455554 K7ESM1 405 aa4.37□□□□□ -1.71
LINC02540-201ENST00000455554 RGS13O14921 159 aa4.37□□□□□ -1.71
LINC02540-201ENST00000455554 GRIN3BO60391 1043 aa4.37□□□□□ -1.71
LINC02540-201ENST00000455554 PRKCAP17252 672 aa4.37□□□□□ -1.71
LINC02540-201ENST00000455554 ST13P50502 369 aaKnown RBP4.37□□□□□ -1.71
LINC02540-201ENST00000455554 SLURP1P55000 103 aa4.37□□□□□ -1.71
LINC02540-201ENST00000455554 CYP4F8P98187 520 aa4.37□□□□□ -1.71
LINC02540-201ENST00000455554 SNW1Q13573 536 aaKnown RBP4.37□□□□□ -1.71
LINC02540-201ENST00000455554 CBX2Q14781 532 aaPredicted RBP4.37□□□□□ -1.71
LINC02540-201ENST00000455554 TAF1CQ15572 869 aaPredicted RBP4.37□□□□□ -1.71
LINC02540-201ENST00000455554 NBPF9Q3BBW0 867 aa4.37□□□□□ -1.71
LINC02540-201ENST00000455554 ARID3AQ99856 593 aa4.37□□□□□ -1.71
LINC02540-201ENST00000455554 DUSP9Q99956 384 aaKnown RBP4.37□□□□□ -1.71
LINC02540-201ENST00000455554 TNFRSF12AQ9NP84 129 aa4.37□□□□□ -1.71
LINC02540-201ENST00000455554 A0A1B0GTL3 188 aa4.36□□□□□ -1.71
LINC02540-201ENST00000455554 UBOX5O94941 541 aa4.36□□□□□ -1.71
LINC02540-201ENST00000455554 PRAMEF1O95521 474 aa4.36□□□□□ -1.71
LINC02540-201ENST00000455554 PF4P02776 101 aa4.36□□□□□ -1.71
LINC02540-201ENST00000455554 ENDOUP21128 410 aaKnown RBP4.36□□□□□ -1.71
LINC02540-201ENST00000455554 ZNF827Q17R98 1081 aa4.36□□□□□ -1.71
LINC02540-201ENST00000455554 UBXN11Q5T124 520 aa4.36□□□□□ -1.71
LINC02540-201ENST00000455554 NBPF12Q5TAG4 269 aaPredicted RBP4.36□□□□□ -1.71
LINC02540-201ENST00000455554 RPTNQ6XPR3 784 aa4.36□□□□□ -1.71
LINC02540-201ENST00000455554 SLCO6A1Q86UG4 719 aa4.36□□□□□ -1.71
LINC02540-201ENST00000455554 NUP43Q8NFH3 380 aa4.36□□□□□ -1.71
LINC02540-201ENST00000455554 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.36□□□□□ -1.71
LINC02540-201ENST00000455554 A0A1W2PQ45 241 aaPredicted RBP4.35□□□□□ -1.71
LINC02540-201ENST00000455554 A0A1W2PQY0 241 aa4.35□□□□□ -1.71
LINC02540-201ENST00000455554 SIGLEC6O43699 453 aa4.35□□□□□ -1.71
LINC02540-201ENST00000455554 RAG1P15918 1043 aa4.35□□□□□ -1.71
LINC02540-201ENST00000455554 PFKLP17858 780 aa4.35□□□□□ -1.71
LINC02540-201ENST00000455554 IGFBP6P24592 240 aaPredicted RBP4.35□□□□□ -1.71
LINC02540-201ENST00000455554 LIMS1P48059 325 aa4.35□□□□□ -1.71
LINC02540-201ENST00000455554 MLECQ14165 292 aa4.35□□□□□ -1.71
LINC02540-201ENST00000455554 PLEKHN1Q494U1 663 aaPredicted RBP4.35□□□□□ -1.71
LINC02540-201ENST00000455554 ARSHQ5FYA8 562 aa4.35□□□□□ -1.71
LINC02540-201ENST00000455554 C14orf37Q86TY3 774 aa4.35□□□□□ -1.71
LINC02540-201ENST00000455554 USP40Q9NVE5 1235 aa4.35□□□□□ -1.71
LINC02540-201ENST00000455554 ERVK13-1Q9NX77 482 aa4.35□□□□□ -1.71
LINC02540-201ENST00000455554 ACSL6Q9UKU0 697 aa4.35□□□□□ -1.71
LINC02540-201ENST00000455554 IVNS1ABPQ9Y6Y0 642 aa4.35□□□□□ -1.71
LINC02540-201ENST00000455554 IRS2Q9Y4H2 1338 aa4.35□□□□□ -1.71
LINC02540-201ENST00000455554 AKAP8O43823 692 aaKnown RBP4.34□□□□□ -1.71
LINC02540-201ENST00000455554 MAPKAPK2P49137 400 aa4.34□□□□□ -1.71
LINC02540-201ENST00000455554 ZNF200P98182 395 aaPredicted RBP4.34□□□□□ -1.71
LINC02540-201ENST00000455554 RAD51AP2Q09MP3 1159 aa4.34□□□□□ -1.71
LINC02540-201ENST00000455554 MPP2Q14168 576 aa4.34□□□□□ -1.71
LINC02540-201ENST00000455554 NR1I3Q14994 352 aa4.34□□□□□ -1.71
LINC02540-201ENST00000455554 VWA3BQ502W6 1294 aa4.34□□□□□ -1.71
LINC02540-201ENST00000455554 ZC3H14Q6PJT7 736 aaKnown RBP4.34□□□□□ -1.71
LINC02540-201ENST00000455554 REC114Q7Z4M0 266 aa4.34□□□□□ -1.71
LINC02540-201ENST00000455554 FERMT3Q86UX7 667 aa4.34□□□□□ -1.71
LINC02540-201ENST00000455554 EAF1Q96JC9 268 aaPredicted RBP4.34□□□□□ -1.71
LINC02540-201ENST00000455554 RHOVQ96L33 236 aa4.34□□□□□ -1.71
LINC02540-201ENST00000455554 CDADC1Q9BWV3 514 aa4.34□□□□□ -1.71
LINC02540-201ENST00000455554 HCFC2Q9Y5Z7 792 aa4.34□□□□□ -1.71
LINC02540-201ENST00000455554 PLA2G1BP04054 148 aaKnown RBP4.33□□□□□ -1.72
LINC02540-201ENST00000455554 MSL3P1P0C860 447 aa4.33□□□□□ -1.72
LINC02540-201ENST00000455554 MAGEA10P43363 369 aaPredicted RBP4.33□□□□□ -1.72
LINC02540-201ENST00000455554 TARBP2Q15633 366 aaKnown RBP4.33□□□□□ -1.72
LINC02540-201ENST00000455554 NT5DC1Q5TFE4 455 aa4.33□□□□□ -1.72
LINC02540-201ENST00000455554 LIPIQ6XZB0 460 aa4.33□□□□□ -1.72
LINC02540-201ENST00000455554 LSRQ86X29 649 aaPredicted RBP4.33□□□□□ -1.72
LINC02540-201ENST00000455554 TMEM74Q96NL1 305 aa4.33□□□□□ -1.72
LINC02540-201ENST00000455554 PRDM14Q9GZV8 571 aa4.33□□□□□ -1.72
LINC02540-201ENST00000455554 CHST7Q9NS84 486 aa4.33□□□□□ -1.72
LINC02540-201ENST00000455554 IMPACTQ9P2X3 320 aa4.33□□□□□ -1.72
LINC02540-201ENST00000455554 SUSD2Q9UGT4 822 aa4.33□□□□□ -1.72
LINC02540-201ENST00000455554 USP31Q70CQ4 1352 aa4.32□□□□□ -1.72
LINC02540-201ENST00000455554 SUV39H1O43463 412 aa4.32□□□□□ -1.72
LINC02540-201ENST00000455554 ZNF205O95201 554 aa4.32□□□□□ -1.72
LINC02540-201ENST00000455554 TNFRSF1AP19438 455 aa4.32□□□□□ -1.72
LINC02540-201ENST00000455554 GBP2P32456 591 aaPredicted RBP4.32□□□□□ -1.72
LINC02540-201ENST00000455554 BMP8BP34820 402 aa4.32□□□□□ -1.72
LINC02540-201ENST00000455554 FAM160A1Q05DH4 1040 aa4.32□□□□□ -1.72
LINC02540-201ENST00000455554 EAPPQ56P03 285 aaPredicted RBP4.32□□□□□ -1.72
LINC02540-201ENST00000455554 SNAP47Q5SQN1 464 aa4.32□□□□□ -1.72
LINC02540-201ENST00000455554 RELL1Q8IUW5 271 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms