RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 SLC9C1Q4G0N8 1177 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 TMEM67Q5HYA8 995 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 BTNL9Q6UXG8 535 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 STOX1Q6ZVD7 989 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 NCAPG2Q86XI2 1143 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 MB21D2Q8IYB1 491 aaPredicted RBP10.39□□□□□ -0.75
COL8A1-203ENST00000452013 TRMT44Q8IYL2 757 aaKnown RBP10.39□□□□□ -0.75
COL8A1-203ENST00000452013 CPXCR1Q8N123 301 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 SLAIN1Q8ND83 568 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 PXYLP1Q8TE99 480 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 TMEM87BQ96K49 555 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 TEX13BQ9BXU2 312 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 SLC38A10Q9HBR0 1119 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 SLC5A4Q9NY91 659 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 BIN2Q9UBW5 565 aaPredicted RBP10.39□□□□□ -0.75
COL8A1-203ENST00000452013 PNMA2Q9UL42 364 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 GABRQQ9UN88 632 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 TAF6LQ9Y6J9 622 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 MYH7P12883 1935 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 CDK5RAP2Q96SN8 1893 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 PRC1O43663 620 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 ADCY3O60266 1144 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 PARP1P09874 1014 aaKnown RBP10.38□□□□□ -0.75
COL8A1-203ENST00000452013 SNHG28P0DPA3 235 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 FCER1AP12319 257 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 XRCC5P13010 732 aaKnown RBP10.38□□□□□ -0.75
COL8A1-203ENST00000452013 CYP2B6P20813 491 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 PSMA5P28066 241 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 GRK4P32298 578 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 HSPA4P34932 840 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 RGS2P41220 211 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 SLC4A3P48751 1232 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 UBXN2AP68543 259 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 ASPRV1Q53RT3 343 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 MORN1Q5T089 497 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 SYDE2Q5VT97 1194 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 DHX32Q7L7V1 743 aaKnown RBP10.38□□□□□ -0.75
COL8A1-203ENST00000452013 CHST3Q7LGC8 479 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 CATIPQ7Z7H3 387 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 DPP9Q86TI2 863 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 ABRAQ8N0Z2 381 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 REPS2Q8NFH8 660 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 IGDCC4Q8TDY8 1250 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 KCNB2Q92953 911 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 RAVER2Q9HCJ3 691 aaKnown RBP10.38□□□□□ -0.75
COL8A1-203ENST00000452013 FBXO40Q9UH90 709 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 PRR12Q9ULL5 1215 aa10.38□□□□□ -0.75
COL8A1-203ENST00000452013 FRMPD2Q68DX3 1309 aaPredicted RBP10.37□□□□□ -0.75
COL8A1-203ENST00000452013 CCDC69A6NI79 296 aa10.37□□□□□ -0.75
COL8A1-203ENST00000452013 SLC16A2P36021 539 aa10.37□□□□□ -0.75
COL8A1-203ENST00000452013 LIFRP42702 1097 aa10.37□□□□□ -0.75
COL8A1-203ENST00000452013 MAP2K5Q13163 448 aa10.37□□□□□ -0.75
COL8A1-203ENST00000452013 KCTD2Q14681 263 aa10.37□□□□□ -0.75
COL8A1-203ENST00000452013 TKFCQ3LXA3 575 aa10.37□□□□□ -0.75
COL8A1-203ENST00000452013 SNRNP48Q6IEG0 339 aaKnown RBP10.37□□□□□ -0.75
COL8A1-203ENST00000452013 TTBK2Q6IQ55 1244 aa10.37□□□□□ -0.75
COL8A1-203ENST00000452013 SYNE3Q6ZMZ3 975 aa10.37□□□□□ -0.75
COL8A1-203ENST00000452013 NFXL1Q6ZNB6 911 aa10.37□□□□□ -0.75
COL8A1-203ENST00000452013 RASEFQ8IZ41 740 aa10.37□□□□□ -0.75
COL8A1-203ENST00000452013 CHST13Q8NET6 341 aa10.37□□□□□ -0.75
COL8A1-203ENST00000452013 ARMC5Q96C12 935 aa10.37□□□□□ -0.75
COL8A1-203ENST00000452013 TMEM106CQ9BVX2 250 aa10.37□□□□□ -0.75
COL8A1-203ENST00000452013 USP26Q9BXU7 913 aa10.37□□□□□ -0.75
COL8A1-203ENST00000452013 ZNF214Q9UL59 606 aaPredicted RBP10.37□□□□□ -0.75
COL8A1-203ENST00000452013 WDR19Q8NEZ3 1342 aa10.36□□□□□ -0.75
COL8A1-203ENST00000452013 GOLGA8HP0CJ92 632 aa10.36□□□□□ -0.75
COL8A1-203ENST00000452013 CALM1P0DP23 149 aa10.36□□□□□ -0.75
COL8A1-203ENST00000452013 CALM2P0DP24 149 aa10.36□□□□□ -0.75
COL8A1-203ENST00000452013 CALM3P0DP25 149 aa10.36□□□□□ -0.75
COL8A1-203ENST00000452013 ANTXR2P58335 489 aa10.36□□□□□ -0.75
COL8A1-203ENST00000452013 FGD1P98174 961 aa10.36□□□□□ -0.75
COL8A1-203ENST00000452013 EXOSC10Q01780 885 aaKnown RBP10.36□□□□□ -0.75
COL8A1-203ENST00000452013 GRB14Q14449 540 aa10.36□□□□□ -0.75
COL8A1-203ENST00000452013 SH3TC2Q8TF17 1288 aa10.36□□□□□ -0.75
COL8A1-203ENST00000452013 USP6NLQ92738 828 aa10.36□□□□□ -0.75
COL8A1-203ENST00000452013 DDX11Q96FC9 970 aa10.36□□□□□ -0.75
COL8A1-203ENST00000452013 MMP19Q99542 508 aa10.36□□□□□ -0.75
COL8A1-203ENST00000452013 MAP3K14Q99558 947 aa10.36□□□□□ -0.75
COL8A1-203ENST00000452013 UBA5Q9GZZ9 404 aa10.36□□□□□ -0.75
COL8A1-203ENST00000452013 RANBP17Q9H2T7 1088 aaKnown RBP10.36□□□□□ -0.75
COL8A1-203ENST00000452013 SNX14Q9Y5W7 946 aa10.36□□□□□ -0.75
COL8A1-203ENST00000452013 PHIPQ8WWQ0 1821 aa10.35□□□□□ -0.75
COL8A1-203ENST00000452013 BAZ2AQ9UIF9 1905 aaKnown RBP10.35□□□□□ -0.75
COL8A1-203ENST00000452013 PALM3A6NDB9 673 aaPredicted RBP10.35□□□□□ -0.75
COL8A1-203ENST00000452013 KLRF2D3W0D1 207 aa10.35□□□□□ -0.75
COL8A1-203ENST00000452013 SH2B2O14492 632 aaPredicted RBP10.35□□□□□ -0.75
COL8A1-203ENST00000452013 DHX16O60231 1041 aaKnown RBP10.35□□□□□ -0.75
COL8A1-203ENST00000452013 ICAM1P05362 532 aa10.35□□□□□ -0.75
COL8A1-203ENST00000452013 HOXC6P09630 235 aa10.35□□□□□ -0.75
COL8A1-203ENST00000452013 ADORA2AP29274 412 aa10.35□□□□□ -0.75
COL8A1-203ENST00000452013 KIF5BP33176 963 aa10.35□□□□□ -0.75
COL8A1-203ENST00000452013 GNAQP50148 359 aa10.35□□□□□ -0.75
COL8A1-203ENST00000452013 TRAF1Q13077 416 aa10.35□□□□□ -0.75
COL8A1-203ENST00000452013 IFFO2Q5TF58 517 aa10.35□□□□□ -0.75
COL8A1-203ENST00000452013 CCDC174Q6PII3 467 aa10.35□□□□□ -0.75
COL8A1-203ENST00000452013 BLOC1S2Q6QNY1 142 aa10.35□□□□□ -0.75
COL8A1-203ENST00000452013 CTCFLQ8NI51 663 aaPredicted RBP10.35□□□□□ -0.75
COL8A1-203ENST00000452013 NUP133Q8WUM0 1156 aa10.35□□□□□ -0.75
COL8A1-203ENST00000452013 ZNF333Q96JL9 665 aa10.35□□□□□ -0.75
COL8A1-203ENST00000452013 AGBL1Q96MI9 1066 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms