RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 RIOX2Q8IUF8 465 aa16.84■□□□□ 0.29
COL3A1-203ENST00000450867 IGDCC4Q8TDY8 1250 aa16.84■□□□□ 0.29
COL3A1-203ENST00000450867 ABHD8Q96I13 439 aa16.84■□□□□ 0.29
COL3A1-203ENST00000450867 HPS5Q9UPZ3 1129 aa16.84■□□□□ 0.29
COL3A1-203ENST00000450867 PTCH2Q9Y6C5 1203 aa16.84■□□□□ 0.29
COL3A1-203ENST00000450867 KIAA0100Q14667 2235 aaKnown RBP16.84■□□□□ 0.29
COL3A1-203ENST00000450867 IFIT3O14879 490 aaKnown RBP16.83■□□□□ 0.28
COL3A1-203ENST00000450867 SLC25A27O95847 323 aa16.83■□□□□ 0.28
COL3A1-203ENST00000450867 COPB2P35606 906 aa16.83■□□□□ 0.28
COL3A1-203ENST00000450867 MORN1Q5T089 497 aa16.83■□□□□ 0.28
COL3A1-203ENST00000450867 PLEKHH3Q7Z736 793 aa16.83■□□□□ 0.28
COL3A1-203ENST00000450867 SOCS4Q8WXH5 440 aa16.83■□□□□ 0.28
COL3A1-203ENST00000450867 ARMC5Q96C12 935 aa16.83■□□□□ 0.28
COL3A1-203ENST00000450867 TMEM87BQ96K49 555 aa16.83■□□□□ 0.28
COL3A1-203ENST00000450867 TEX13BQ9BXU2 312 aa16.83■□□□□ 0.28
COL3A1-203ENST00000450867 USP26Q9BXU7 913 aa16.83■□□□□ 0.28
COL3A1-203ENST00000450867 MROH8Q9H579 483 aa16.83■□□□□ 0.28
COL3A1-203ENST00000450867 GABRQQ9UN88 632 aa16.83■□□□□ 0.28
COL3A1-203ENST00000450867 ERICH2A1L162 156 aa16.82■□□□□ 0.28
COL3A1-203ENST00000450867 SLC15A5A6NIM6 579 aa16.82■□□□□ 0.28
COL3A1-203ENST00000450867 PRC1O43663 620 aa16.82■□□□□ 0.28
COL3A1-203ENST00000450867 ZBED4O75132 1171 aa16.82■□□□□ 0.28
COL3A1-203ENST00000450867 STAT3P40763 770 aa16.82■□□□□ 0.28
COL3A1-203ENST00000450867 FLT3LGP49771 235 aa16.82■□□□□ 0.28
COL3A1-203ENST00000450867 GRB14Q14449 540 aa16.82■□□□□ 0.28
COL3A1-203ENST00000450867 ASPRV1Q53RT3 343 aa16.82■□□□□ 0.28
COL3A1-203ENST00000450867 ABRAQ8N0Z2 381 aa16.82■□□□□ 0.28
COL3A1-203ENST00000450867 PXYLP1Q8TE99 480 aa16.82■□□□□ 0.28
COL3A1-203ENST00000450867 KIFC2Q96AC6 838 aa16.82■□□□□ 0.28
COL3A1-203ENST00000450867 LY9Q9HBG7 655 aa16.82■□□□□ 0.28
COL3A1-203ENST00000450867 PRR12Q9ULL5 1215 aa16.82■□□□□ 0.28
COL3A1-203ENST00000450867 ZNF536O15090 1300 aa16.81■□□□□ 0.28
COL3A1-203ENST00000450867 SH2B2O14492 632 aaPredicted RBP16.81■□□□□ 0.28
COL3A1-203ENST00000450867 STRNO43815 780 aa16.81■□□□□ 0.28
COL3A1-203ENST00000450867 EIF5BO60841 1220 aaKnown RBP16.81■□□□□ 0.28
COL3A1-203ENST00000450867 XRCC5P13010 732 aaKnown RBP16.81■□□□□ 0.28
COL3A1-203ENST00000450867 ERCC3P19447 782 aa16.81■□□□□ 0.28
COL3A1-203ENST00000450867 PTPREP23469 700 aa16.81■□□□□ 0.28
COL3A1-203ENST00000450867 LIFRP42702 1097 aa16.81■□□□□ 0.28
COL3A1-203ENST00000450867 EXOSC10Q01780 885 aaKnown RBP16.81■□□□□ 0.28
COL3A1-203ENST00000450867 TROAPQ12815 778 aa16.81■□□□□ 0.28
COL3A1-203ENST00000450867 WTAPQ15007 396 aa16.81■□□□□ 0.28
COL3A1-203ENST00000450867 CCDC96Q2M329 555 aa16.81■□□□□ 0.28
COL3A1-203ENST00000450867 ADCK5Q3MIX3 580 aa16.81■□□□□ 0.28
COL3A1-203ENST00000450867 TMEM67Q5HYA8 995 aa16.81■□□□□ 0.28
COL3A1-203ENST00000450867 NEK1Q96PY6 1258 aa16.81■□□□□ 0.28
COL3A1-203ENST00000450867 MAP3K14Q99558 947 aa16.81■□□□□ 0.28
COL3A1-203ENST00000450867 RANBP17Q9H2T7 1088 aaKnown RBP16.81■□□□□ 0.28
COL3A1-203ENST00000450867 SNX14Q9Y5W7 946 aa16.81■□□□□ 0.28
COL3A1-203ENST00000450867 BAZ2BQ9UIF8 2168 aaKnown RBP16.81■□□□□ 0.28
COL3A1-203ENST00000450867 LCTP09848 1927 aa16.8■□□□□ 0.28
COL3A1-203ENST00000450867 HMGB1P09429 215 aaKnown RBP16.8■□□□□ 0.28
COL3A1-203ENST00000450867 HOXC6P09630 235 aa16.8■□□□□ 0.28
COL3A1-203ENST00000450867 SYDE2Q5VT97 1194 aa16.8■□□□□ 0.28
COL3A1-203ENST00000450867 TTBK2Q6IQ55 1244 aa16.8■□□□□ 0.28
COL3A1-203ENST00000450867 CHST3Q7LGC8 479 aa16.8■□□□□ 0.28
COL3A1-203ENST00000450867 SGMS1Q86VZ5 419 aa16.8■□□□□ 0.28
COL3A1-203ENST00000450867 CCAR1Q8IX12 1150 aaKnown RBP16.8■□□□□ 0.28
COL3A1-203ENST00000450867 TMTC2Q8N394 836 aa16.8■□□□□ 0.28
COL3A1-203ENST00000450867 SLAIN1Q8ND83 568 aa16.8■□□□□ 0.28
COL3A1-203ENST00000450867 RAET1EQ8TD07 263 aa16.8■□□□□ 0.28
COL3A1-203ENST00000450867 NUDT12Q9BQG2 462 aa16.8■□□□□ 0.28
COL3A1-203ENST00000450867 SENP2Q9HC62 589 aa16.8■□□□□ 0.28
COL3A1-203ENST00000450867 FRMPD2Q68DX3 1309 aaPredicted RBP16.79■□□□□ 0.28
COL3A1-203ENST00000450867 ECM2O94769 699 aaPredicted RBP16.79■□□□□ 0.28
COL3A1-203ENST00000450867 GRK4P32298 578 aa16.79■□□□□ 0.28
COL3A1-203ENST00000450867 IKQ13123 557 aaPredicted RBP16.79■□□□□ 0.28
COL3A1-203ENST00000450867 MAP2K5Q13163 448 aa16.79■□□□□ 0.28
COL3A1-203ENST00000450867 PLS1Q14651 629 aa16.79■□□□□ 0.28
COL3A1-203ENST00000450867 GRM4Q14833 912 aa16.79■□□□□ 0.28
COL3A1-203ENST00000450867 SNRNP48Q6IEG0 339 aaKnown RBP16.79■□□□□ 0.28
COL3A1-203ENST00000450867 SAMD1Q6SPF0 538 aaPredicted RBP16.79■□□□□ 0.28
COL3A1-203ENST00000450867 DHX32Q7L7V1 743 aaKnown RBP16.79■□□□□ 0.28
COL3A1-203ENST00000450867 ZNF333Q96JL9 665 aa16.79■□□□□ 0.28
COL3A1-203ENST00000450867 GPCPD1Q9NPB8 672 aa16.79■□□□□ 0.28
COL3A1-203ENST00000450867 MTMR7Q9Y216 660 aa16.79■□□□□ 0.28
COL3A1-203ENST00000450867 IVNS1ABPQ9Y6Y0 642 aa16.79■□□□□ 0.28
COL3A1-203ENST00000450867 PALM3A6NDB9 673 aaPredicted RBP16.78■□□□□ 0.28
COL3A1-203ENST00000450867 ADCY3O60266 1144 aa16.78■□□□□ 0.28
COL3A1-203ENST00000450867 IGHA2P01877 340 aa16.78■□□□□ 0.28
COL3A1-203ENST00000450867 PARP1P09874 1014 aaKnown RBP16.78■□□□□ 0.28
COL3A1-203ENST00000450867 RGS2P41220 211 aa16.78■□□□□ 0.28
COL3A1-203ENST00000450867 TKFCQ3LXA3 575 aa16.78■□□□□ 0.28
COL3A1-203ENST00000450867 SLC9C1Q4G0N8 1177 aa16.78■□□□□ 0.28
COL3A1-203ENST00000450867 NCAPG2Q86XI2 1143 aa16.78■□□□□ 0.28
COL3A1-203ENST00000450867 TRMT44Q8IYL2 757 aaKnown RBP16.78■□□□□ 0.28
COL3A1-203ENST00000450867 FBXL16Q8N461 479 aa16.78■□□□□ 0.28
COL3A1-203ENST00000450867 IL17RAQ96F46 866 aa16.78■□□□□ 0.28
COL3A1-203ENST00000450867 APBA2Q99767 749 aa16.78■□□□□ 0.28
COL3A1-203ENST00000450867 MAD2L2Q9UI95 211 aa16.78■□□□□ 0.28
COL3A1-203ENST00000450867 PNMA2Q9UL42 364 aa16.78■□□□□ 0.28
COL3A1-203ENST00000450867 DDAH1O94760 285 aa16.77■□□□□ 0.28
COL3A1-203ENST00000450867 ICAM1P05362 532 aa16.77■□□□□ 0.28
COL3A1-203ENST00000450867 SLC16A2P36021 539 aa16.77■□□□□ 0.28
COL3A1-203ENST00000450867 NBPF11Q86T75 865 aa16.77■□□□□ 0.28
COL3A1-203ENST00000450867 CHST13Q8NET6 341 aa16.77■□□□□ 0.28
COL3A1-203ENST00000450867 CHMP4CQ96CF2 233 aa16.77■□□□□ 0.28
COL3A1-203ENST00000450867 TM6SF1Q9BZW5 370 aa16.77■□□□□ 0.28
COL3A1-203ENST00000450867 RAVER2Q9HCJ3 691 aaKnown RBP16.77■□□□□ 0.28
COL3A1-203ENST00000450867 GPHNQ9NQX3 736 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms