RNA–Protein interactions for RNA: ENST00000448879.5

SEMA3A-205, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-205ENST00000448879 SRSF3P84103 164 aaKnown RBP7.58□□□□□ -1.2
SEMA3A-205ENST00000448879 CDCP2Q5VXM1 449 aa7.58□□□□□ -1.2
SEMA3A-205ENST00000448879 NLRC3Q7RTR2 1065 aa7.58□□□□□ -1.2
SEMA3A-205ENST00000448879 LINC00116Q8NCU8 138 aa7.58□□□□□ -1.2
SEMA3A-205ENST00000448879 GIPC2Q8TF65 315 aa7.58□□□□□ -1.2
SEMA3A-205ENST00000448879 ATG4CQ96DT6 458 aa7.58□□□□□ -1.2
SEMA3A-205ENST00000448879 CNNM2Q9H8M5 875 aa7.58□□□□□ -1.2
SEMA3A-205ENST00000448879 KCNQ5Q9NR82 932 aa7.58□□□□□ -1.2
SEMA3A-205ENST00000448879 SIRT5Q9NXA8 310 aa7.58□□□□□ -1.2
SEMA3A-205ENST00000448879 UBP1Q9NZI7 540 aa7.58□□□□□ -1.2
SEMA3A-205ENST00000448879 FBXL21Q9UKT6 434 aa7.58□□□□□ -1.2
SEMA3A-205ENST00000448879 KCTD3Q9Y597 815 aa7.58□□□□□ -1.2
SEMA3A-205ENST00000448879 BAZ1BQ9UIG0 1483 aaKnown RBP7.57□□□□□ -1.2
SEMA3A-205ENST00000448879 BIVM-ERCC5R4GMW8 1640 aa7.57□□□□□ -1.2
SEMA3A-205ENST00000448879 SIGLEC6O43699 453 aa7.57□□□□□ -1.2
SEMA3A-205ENST00000448879 GREM1O60565 184 aa7.57□□□□□ -1.2
SEMA3A-205ENST00000448879 ZNF165P49910 485 aa7.57□□□□□ -1.2
SEMA3A-205ENST00000448879 CTSWP56202 376 aa7.57□□□□□ -1.2
SEMA3A-205ENST00000448879 TCERG1LQ5VWI1 586 aa7.57□□□□□ -1.2
SEMA3A-205ENST00000448879 ZPBP2Q6X784 338 aa7.57□□□□□ -1.2
SEMA3A-205ENST00000448879 HHIPL1Q96JK4 782 aa7.57□□□□□ -1.2
SEMA3A-205ENST00000448879 PRDM14Q9GZV8 571 aa7.57□□□□□ -1.2
SEMA3A-205ENST00000448879 ZCCHC4Q9H5U6 513 aa7.57□□□□□ -1.2
SEMA3A-205ENST00000448879 EHMT1Q9H9B1 1298 aa7.57□□□□□ -1.2
SEMA3A-205ENST00000448879 CRTAC1Q9NQ79 661 aa7.57□□□□□ -1.2
SEMA3A-205ENST00000448879 CHST7Q9NS84 486 aa7.57□□□□□ -1.2
SEMA3A-205ENST00000448879 RAPGEFL1Q9UHV5 662 aa7.57□□□□□ -1.2
SEMA3A-205ENST00000448879 ZNF281Q9Y2X9 895 aa7.57□□□□□ -1.2
SEMA3A-205ENST00000448879 TMEM82A0PJX8 343 aa7.56□□□□□ -1.2
SEMA3A-205ENST00000448879 NOTOA8MTQ0 251 aa7.56□□□□□ -1.2
SEMA3A-205ENST00000448879 BMP7P18075 431 aa7.56□□□□□ -1.2
SEMA3A-205ENST00000448879 RTP1P59025 263 aa7.56□□□□□ -1.2
SEMA3A-205ENST00000448879 CLCQ05315 142 aa7.56□□□□□ -1.2
SEMA3A-205ENST00000448879 BBS9Q3SYG4 887 aa7.56□□□□□ -1.2
SEMA3A-205ENST00000448879 OLFML2BQ68BL8 750 aa7.56□□□□□ -1.2
SEMA3A-205ENST00000448879 TAF6LQ9Y6J9 622 aa7.56□□□□□ -1.2
SEMA3A-205ENST00000448879 KIF21BO75037 1637 aa7.56□□□□□ -1.2
SEMA3A-205ENST00000448879 EEA1Q15075 1411 aa7.55□□□□□ -1.2
SEMA3A-205ENST00000448879 B8ZZF3 427 aa7.55□□□□□ -1.2
SEMA3A-205ENST00000448879 SDHBP21912 280 aa7.55□□□□□ -1.2
SEMA3A-205ENST00000448879 CCNFP41002 786 aa7.55□□□□□ -1.2
SEMA3A-205ENST00000448879 LRRFIP1Q32MZ4 808 aaKnown RBP7.55□□□□□ -1.2
SEMA3A-205ENST00000448879 TMEM151BQ8IW70 566 aa7.55□□□□□ -1.2
SEMA3A-205ENST00000448879 NKD1Q969G9 470 aa7.55□□□□□ -1.2
SEMA3A-205ENST00000448879 FCRL2Q96LA5 508 aaPredicted RBP7.55□□□□□ -1.2
SEMA3A-205ENST00000448879 CDADC1Q9BWV3 514 aa7.55□□□□□ -1.2
SEMA3A-205ENST00000448879 GCM1Q9NP62 436 aa7.55□□□□□ -1.2
SEMA3A-205ENST00000448879 GFOD1Q9NXC2 390 aa7.55□□□□□ -1.2
SEMA3A-205ENST00000448879 ADAMTS1Q9UHI8 967 aa7.55□□□□□ -1.2
SEMA3A-205ENST00000448879 MINPP1Q9UNW1 487 aa7.55□□□□□ -1.2
SEMA3A-205ENST00000448879 PCDHB12Q9Y5F1 795 aa7.55□□□□□ -1.2
SEMA3A-205ENST00000448879 IRAK3Q9Y616 596 aa7.55□□□□□ -1.2
SEMA3A-205ENST00000448879 KRTAP9-7A8MTY7 169 aa7.54□□□□□ -1.2
SEMA3A-205ENST00000448879 PNLIPP16233 465 aa7.54□□□□□ -1.2
SEMA3A-205ENST00000448879 PI3P19957 117 aa7.54□□□□□ -1.2
SEMA3A-205ENST00000448879 ENDOUP21128 410 aaKnown RBP7.54□□□□□ -1.2
SEMA3A-205ENST00000448879 ARL4AP40617 200 aa7.54□□□□□ -1.2
SEMA3A-205ENST00000448879 TRIM26Q12899 539 aaPredicted RBP7.54□□□□□ -1.2
SEMA3A-205ENST00000448879 GALNT18Q6P9A2 607 aa7.54□□□□□ -1.2
SEMA3A-205ENST00000448879 REXO1Q8N1G1 1221 aaKnown RBP7.54□□□□□ -1.2
SEMA3A-205ENST00000448879 SLC6A18Q96N87 628 aa7.54□□□□□ -1.2
SEMA3A-205ENST00000448879 TNFRSF10DQ9UBN6 386 aa7.54□□□□□ -1.2
SEMA3A-205ENST00000448879 GPR55Q9Y2T6 319 aaPredicted RBP7.54□□□□□ -1.2
SEMA3A-205ENST00000448879 SOGA1O94964 1423 aa7.53□□□□□ -1.2
SEMA3A-205ENST00000448879 WRNQ14191 1432 aaPredicted RBP eCLIP7.53□□□□□ -1.2
SEMA3A-205ENST00000448879 TOP2BQ02880 1626 aa7.53□□□□□ -1.2
SEMA3A-205ENST00000448879 FAM86C2PA6NEL3 165 aa7.53□□□□□ -1.2
SEMA3A-205ENST00000448879 PRRG2O14669 202 aa7.53□□□□□ -1.2
SEMA3A-205ENST00000448879 EFEMP2O95967 443 aa7.53□□□□□ -1.2
SEMA3A-205ENST00000448879 NME1P15531 152 aaKnown RBP7.53□□□□□ -1.2
SEMA3A-205ENST00000448879 SSPNQ14714 243 aa7.53□□□□□ -1.2
SEMA3A-205ENST00000448879 SIGLEC10Q96LC7 697 aa7.53□□□□□ -1.2
SEMA3A-205ENST00000448879 ANTXR1Q9H6X2 564 aa7.53□□□□□ -1.2
SEMA3A-205ENST00000448879 PARD6AQ9NPB6 346 aa7.53□□□□□ -1.2
SEMA3A-205ENST00000448879 MBD1Q9UIS9 605 aaPredicted RBP7.53□□□□□ -1.2
SEMA3A-205ENST00000448879 NCANO14594 1321 aa7.52□□□□□ -1.2
SEMA3A-205ENST00000448879 RUSC2Q8N2Y8 1516 aa7.52□□□□□ -1.2
SEMA3A-205ENST00000448879 WTIPA6NIX2 430 aaPredicted RBP7.52□□□□□ -1.21
SEMA3A-205ENST00000448879 HRKO00198 91 aa7.52□□□□□ -1.21
SEMA3A-205ENST00000448879 HOXA5P20719 270 aa7.52□□□□□ -1.21
SEMA3A-205ENST00000448879 VIPR1P32241 457 aa7.52□□□□□ -1.21
SEMA3A-205ENST00000448879 TMEM192Q8IY95 271 aa7.52□□□□□ -1.21
SEMA3A-205ENST00000448879 FAM9AQ8IZU1 332 aaPredicted RBP7.52□□□□□ -1.21
SEMA3A-205ENST00000448879 PLCD4Q9BRC7 762 aa7.52□□□□□ -1.21
SEMA3A-205ENST00000448879 DSCC1Q9BVC3 393 aa7.52□□□□□ -1.21
SEMA3A-205ENST00000448879 ABLIM1O14639 778 aa7.51□□□□□ -1.21
SEMA3A-205ENST00000448879 MPOP05164 745 aa7.51□□□□□ -1.21
SEMA3A-205ENST00000448879 EPHB3P54753 998 aa7.51□□□□□ -1.21
SEMA3A-205ENST00000448879 HSF5Q4G112 596 aaPredicted RBP7.51□□□□□ -1.21
SEMA3A-205ENST00000448879 KIAA0825Q8IV33 1275 aa7.51□□□□□ -1.21
SEMA3A-205ENST00000448879 NCAPD3P42695 1498 aa7.5□□□□□ -1.21
SEMA3A-205ENST00000448879 A0A1W2PQ27 194 aa7.5□□□□□ -1.21
SEMA3A-205ENST00000448879 A0A1W2PQ64 194 aa7.5□□□□□ -1.21
SEMA3A-205ENST00000448879 A0A1W2PQC6 194 aa7.5□□□□□ -1.21
SEMA3A-205ENST00000448879 A0A1W2PQD8 194 aa7.5□□□□□ -1.21
SEMA3A-205ENST00000448879 FADS2P1A8MWK0 482 aa7.5□□□□□ -1.21
SEMA3A-205ENST00000448879 PRKCAP17252 672 aa7.5□□□□□ -1.21
SEMA3A-205ENST00000448879 BMP8BP34820 402 aa7.5□□□□□ -1.21
SEMA3A-205ENST00000448879 TMEM62Q0P6H9 643 aa7.5□□□□□ -1.21
SEMA3A-205ENST00000448879 LAPTM5Q13571 262 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms