RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 TMEM60Q9H2L4 133 aa15.99■□□□□ 0.15
ERCC3-203ENST00000445889 LUC7L2Q9Y383 392 aaKnown RBP15.99■□□□□ 0.15
ERCC3-203ENST00000445889 KIAA1328Q86T90 577 aa15.98■□□□□ 0.15
ERCC3-203ENST00000445889 STAG2Q8N3U4 1231 aa15.98■□□□□ 0.15
ERCC3-203ENST00000445889 ANKRD20A12PQ8NF67 263 aa15.98■□□□□ 0.15
ERCC3-203ENST00000445889 TRIM47Q96LD4 638 aa15.98■□□□□ 0.15
ERCC3-203ENST00000445889 SMARCAL1Q9NZC9 954 aa15.98■□□□□ 0.15
ERCC3-203ENST00000445889 LRRC10BA6NIK2 292 aa15.98■□□□□ 0.15
ERCC3-203ENST00000445889 PPARDQ03181 441 aa15.98■□□□□ 0.15
ERCC3-203ENST00000445889 KCTD19Q17RG1 926 aaPredicted RBP15.98■□□□□ 0.15
ERCC3-203ENST00000445889 ZNF658Q5TYW1 1059 aaPredicted RBP15.98■□□□□ 0.15
ERCC3-203ENST00000445889 TYW1BQ6NUM6 668 aa15.98■□□□□ 0.15
ERCC3-203ENST00000445889 OR8K1Q8NGG5 319 aa15.98■□□□□ 0.15
ERCC3-203ENST00000445889 LRRC15Q8TF66 581 aa15.98■□□□□ 0.15
ERCC3-203ENST00000445889 TSPYL1Q9H0U9 437 aa15.98■□□□□ 0.15
ERCC3-203ENST00000445889 TFCP2L1Q9NZI6 479 aa15.98■□□□□ 0.15
ERCC3-203ENST00000445889 PDE2AO00408 941 aaPredicted RBP15.98■□□□□ 0.15
ERCC3-203ENST00000445889 GTPBP6O43824 516 aaPredicted RBP15.98■□□□□ 0.15
ERCC3-203ENST00000445889 WHAMMP3Q1A5X7 153 aa15.98■□□□□ 0.15
ERCC3-203ENST00000445889 MB21D1Q8N884 522 aa15.98■□□□□ 0.15
ERCC3-203ENST00000445889 CCDC148Q8NFR7 591 aa15.98■□□□□ 0.15
ERCC3-203ENST00000445889 JADE2Q9NQC1 790 aa15.98■□□□□ 0.15
ERCC3-203ENST00000445889 RTL9Q8NET4 1388 aa15.97■□□□□ 0.15
ERCC3-203ENST00000445889 CNTNAP5Q8WYK1 1306 aa15.97■□□□□ 0.15
ERCC3-203ENST00000445889 RNF40O75150 1001 aa15.97■□□□□ 0.15
ERCC3-203ENST00000445889 PLEKP08567 350 aaPredicted RBP15.97■□□□□ 0.15
ERCC3-203ENST00000445889 SCG2P13521 617 aa15.97■□□□□ 0.15
ERCC3-203ENST00000445889 EIF5P55010 431 aaKnown RBP15.97■□□□□ 0.15
ERCC3-203ENST00000445889 CAGE1Q8TC20 777 aa15.97■□□□□ 0.15
ERCC3-203ENST00000445889 POLD4Q9HCU8 107 aa15.97■□□□□ 0.15
ERCC3-203ENST00000445889 TRIM21P19474 475 aaKnown RBP15.97■□□□□ 0.15
ERCC3-203ENST00000445889 SLC20A2Q08357 652 aa15.97■□□□□ 0.15
ERCC3-203ENST00000445889 C2orf54Q08AI8 447 aa15.97■□□□□ 0.15
ERCC3-203ENST00000445889 EZH2Q15910 746 aaKnown RBP15.97■□□□□ 0.15
ERCC3-203ENST00000445889 INF2Q27J81 1249 aa15.97■□□□□ 0.15
ERCC3-203ENST00000445889 TTC19Q6DKK2 380 aaPredicted RBP15.97■□□□□ 0.15
ERCC3-203ENST00000445889 SLC51AQ86UW1 340 aa15.97■□□□□ 0.15
ERCC3-203ENST00000445889 CCDC51Q96ER9 411 aa15.97■□□□□ 0.15
ERCC3-203ENST00000445889 SAR1BQ9Y6B6 198 aa15.97■□□□□ 0.15
ERCC3-203ENST00000445889 ADAMTSL3P82987 1691 aa15.96■□□□□ 0.15
ERCC3-203ENST00000445889 TSPY2A6NKD2 308 aa15.96■□□□□ 0.15
ERCC3-203ENST00000445889 CXCR5P32302 372 aa15.96■□□□□ 0.15
ERCC3-203ENST00000445889 CCDC152Q4G0S7 254 aa15.96■□□□□ 0.15
ERCC3-203ENST00000445889 NAALADL2Q58DX5 795 aa15.96■□□□□ 0.15
ERCC3-203ENST00000445889 CERS3Q8IU89 383 aa15.96■□□□□ 0.15
ERCC3-203ENST00000445889 SYF2O95926 243 aaKnown RBP15.96■□□□□ 0.15
ERCC3-203ENST00000445889 LRRC31Q6UY01 552 aa15.96■□□□□ 0.15
ERCC3-203ENST00000445889 HDAC7Q8WUI4 952 aa15.96■□□□□ 0.15
ERCC3-203ENST00000445889 EHD4Q9H223 541 aa15.96■□□□□ 0.15
ERCC3-203ENST00000445889 SRCAPQ6ZRS2 3230 aa15.96■□□□□ 0.15
ERCC3-203ENST00000445889 ITIH6Q6UXX5 1313 aa15.96■□□□□ 0.14
ERCC3-203ENST00000445889 LRP6O75581 1613 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 GOLGA8HP0CJ92 632 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 ATP2B2Q01814 1243 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 TSR1Q2NL82 804 aaKnown RBP15.95■□□□□ 0.14
ERCC3-203ENST00000445889 TRAPPC11Q7Z392 1133 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 JAKMIP2Q96AA8 810 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 EHD2Q9NZN4 543 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 NID2Q14112 1375 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 SEMA3EO15041 775 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 DNA2P51530 1060 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 SLC7A5Q01650 507 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 DNAJC21Q5F1R6 531 aaKnown RBP15.95■□□□□ 0.14
ERCC3-203ENST00000445889 ANKRD13CQ8N6S4 541 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 DYNLL2Q96FJ2 89 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 GBP3Q9H0R5 595 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 SLIT2O94813 1529 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 FCER1AP12319 257 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 PRDX5P30044 214 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 GGCXP38435 758 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 ATP6V1AP38606 617 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 CCDC178Q5BJE1 867 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 FAM71BQ8TC56 605 aa15.95■□□□□ 0.14
ERCC3-203ENST00000445889 PLEKHG2Q9H7P9 1386 aa15.94■□□□□ 0.14
ERCC3-203ENST00000445889 USP17L8P0C7I0 530 aa15.94■□□□□ 0.14
ERCC3-203ENST00000445889 IL6STP40189 918 aaPredicted RBP15.94■□□□□ 0.14
ERCC3-203ENST00000445889 USP14P54578 494 aa15.94■□□□□ 0.14
ERCC3-203ENST00000445889 TBC1D8BQ0IIM8 1120 aa15.94■□□□□ 0.14
ERCC3-203ENST00000445889 TUBB2AQ13885 445 aa15.94■□□□□ 0.14
ERCC3-203ENST00000445889 ADSSL1Q8N142 457 aa15.94■□□□□ 0.14
ERCC3-203ENST00000445889 TUBB2BQ9BVA1 445 aa15.94■□□□□ 0.14
ERCC3-203ENST00000445889 RASSF10A6NK89 507 aa15.94■□□□□ 0.14
ERCC3-203ENST00000445889 ZPR1O75312 459 aa15.94■□□□□ 0.14
ERCC3-203ENST00000445889 FECHP22830 423 aa15.94■□□□□ 0.14
ERCC3-203ENST00000445889 UBA7P41226 1012 aa15.94■□□□□ 0.14
ERCC3-203ENST00000445889 CSGALNACT2Q8N6G5 542 aa15.94■□□□□ 0.14
ERCC3-203ENST00000445889 GOLGA6L1Q8N7Z2 621 aa15.94■□□□□ 0.14
ERCC3-203ENST00000445889 NHEJ1Q9H9Q4 299 aaPredicted RBP15.94■□□□□ 0.14
ERCC3-203ENST00000445889 RBM28Q9NW13 759 aaKnown RBP15.94■□□□□ 0.14
ERCC3-203ENST00000445889 SLAIN2Q9P270 581 aa15.94■□□□□ 0.14
ERCC3-203ENST00000445889 ERVV-1B6SEH8 477 aa15.93■□□□□ 0.14
ERCC3-203ENST00000445889 IVLP07476 585 aa15.93■□□□□ 0.14
ERCC3-203ENST00000445889 IDEP14735 1019 aa15.93■□□□□ 0.14
ERCC3-203ENST00000445889 CRKLP46109 303 aaKnown RBP15.93■□□□□ 0.14
ERCC3-203ENST00000445889 SPAG1Q07617 926 aa15.93■□□□□ 0.14
ERCC3-203ENST00000445889 BLIDQ8IZY5 108 aa15.93■□□□□ 0.14
ERCC3-203ENST00000445889 C4orf32Q8N8J7 132 aa15.93■□□□□ 0.14
ERCC3-203ENST00000445889 UIMC1Q96RL1 719 aa15.93■□□□□ 0.14
ERCC3-203ENST00000445889 TUBGCP2Q9BSJ2 902 aa15.93■□□□□ 0.14
ERCC3-203ENST00000445889 DISC1Q9NRI5 854 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms