RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 ATP2A3Q93084 1043 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 ZNF274Q96GC6 653 aaPredicted RBP12.39□□□□□ -0.43
FN1-211ENST00000443816 KDM2BQ8NHM5 1336 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 RRP9O43818 475 aaKnown RBP12.39□□□□□ -0.43
FN1-211ENST00000443816 MCM6Q14566 821 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 METTL23Q86XA0 190 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 SUGCTQ9HAC7 445 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 NKIRAS1Q9NYS0 192 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 RNASELQ05823 741 aaKnown RBP12.39□□□□□ -0.43
FN1-211ENST00000443816 PLA2G4DQ86XP0 818 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 GREM2Q9H772 168 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 PI4KBQ9UBF8 816 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 K7ENM7 598 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 NEK8Q86SG6 692 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 PANK4Q9NVE7 773 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 SEPT9Q9UHD8 586 aaPredicted RBP12.39□□□□□ -0.43
FN1-211ENST00000443816 LRRIQ4A6NIV6 560 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 ODR4Q5SWX8 454 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 TRIM50Q86XT4 487 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 AMNQ9BXJ7 453 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 C1orf112Q9NSG2 853 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 AATKQ6ZMQ8 1374 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 CLRN2A0PK11 232 aa12.38□□□□□ -0.43
FN1-211ENST00000443816 TPD52P55327 224 aaPredicted RBP12.38□□□□□ -0.43
FN1-211ENST00000443816 ATP6V0A1Q93050 837 aa12.38□□□□□ -0.43
FN1-211ENST00000443816 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.38□□□□□ -0.43
FN1-211ENST00000443816 SFMBT2Q5VUG0 894 aa12.38□□□□□ -0.43
FN1-211ENST00000443816 MASTLQ96GX5 879 aa12.38□□□□□ -0.43
FN1-211ENST00000443816 USTQ9Y2C2 406 aa12.38□□□□□ -0.43
FN1-211ENST00000443816 SLC12A2P55011 1212 aa12.38□□□□□ -0.43
FN1-211ENST00000443816 KARSQ15046 597 aaKnown RBP12.38□□□□□ -0.43
FN1-211ENST00000443816 POMGNT1Q8WZA1 660 aa12.38□□□□□ -0.43
FN1-211ENST00000443816 MYL10Q9BUA6 226 aa12.38□□□□□ -0.43
FN1-211ENST00000443816 HESX1Q9UBX0 185 aa12.38□□□□□ -0.43
FN1-211ENST00000443816 TMEM232C9JQI7 657 aa12.38□□□□□ -0.43
FN1-211ENST00000443816 GTF3C6Q969F1 213 aa12.38□□□□□ -0.43
FN1-211ENST00000443816 ATF5Q9Y2D1 282 aaPredicted RBP12.38□□□□□ -0.43
FN1-211ENST00000443816 TECP42680 631 aa12.38□□□□□ -0.43
FN1-211ENST00000443816 CIAPIN1Q6FI81 312 aa12.38□□□□□ -0.43
FN1-211ENST00000443816 GCNAQ96QF7 691 aa12.38□□□□□ -0.43
FN1-211ENST00000443816 MYO3BQ8WXR4 1341 aa12.38□□□□□ -0.43
FN1-211ENST00000443816 KIAA1841Q6NSI8 718 aa12.38□□□□□ -0.43
FN1-211ENST00000443816 ARFGAP2Q8N6H7 521 aa12.38□□□□□ -0.43
FN1-211ENST00000443816 SMIM23A6NLE4 172 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 HOXD10P28358 340 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 ST7Q9NRC1 585 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 LARSQ9P2J5 1176 aaKnown RBP12.37□□□□□ -0.43
FN1-211ENST00000443816 TSKSQ9UJT2 592 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 GLI2P10070 1586 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 TMEM191BP0C7N4 346 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 IGBP1P78318 339 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 ARHGEF25Q86VW2 580 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 ANKRD36BP1Q96IX9 119 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 TPCN1Q9ULQ1 816 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 PCDHA1Q9Y5I3 950 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 COL4A3BPQ9Y5P4 624 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 RNF17Q9BXT8 1623 aaKnown RBP12.37□□□□□ -0.43
FN1-211ENST00000443816 DYNC1I1O14576 645 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 STAM2O75886 525 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 SLC27A3Q5K4L6 730 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 LRCH2Q5VUJ6 765 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 SEPT14Q6ZU15 432 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 IL17REQ8NFR9 667 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 CACTINQ8WUQ7 758 aaKnown RBP12.37□□□□□ -0.43
FN1-211ENST00000443816 KANSL2Q9H9L4 492 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 IPO11Q9UI26 975 aaKnown RBP12.37□□□□□ -0.43
FN1-211ENST00000443816 SSH2Q76I76 1423 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 RAD17O75943 681 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 PIK3CAP42336 1068 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 NLRP12P59046 1061 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 RSAD2Q8WXG1 361 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 UIMC1Q96RL1 719 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 LAD1O00515 517 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 SCG2P13521 617 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 STAT1P42224 750 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 CYP2J2P51589 502 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 DBNDD1Q9H9R9 158 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 ATP8B3O60423 1300 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 GOLGA8CPA6NN73 597 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 SETDB1Q15047 1291 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 HADHQ16836 314 aaKnown RBP12.37□□□□□ -0.43
FN1-211ENST00000443816 CROCCP2Q86T23 111 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 SEC62Q99442 399 aaKnown RBP12.37□□□□□ -0.43
FN1-211ENST00000443816 IMPACTQ9P2X3 320 aa12.37□□□□□ -0.43
FN1-211ENST00000443816 PPP2R5DQ14738 602 aa12.36□□□□□ -0.43
FN1-211ENST00000443816 MYOCDQ8IZQ8 938 aa12.36□□□□□ -0.43
FN1-211ENST00000443816 CTTNBP2NLQ9P2B4 639 aa12.36□□□□□ -0.43
FN1-211ENST00000443816 KCNJ14Q9UNX9 436 aa12.36□□□□□ -0.43
FN1-211ENST00000443816 OR52Z1P0C646 297 aa12.36□□□□□ -0.43
FN1-211ENST00000443816 UBE3CQ15386 1083 aa12.36□□□□□ -0.43
FN1-211ENST00000443816 KRT40Q6A162 431 aa12.36□□□□□ -0.43
FN1-211ENST00000443816 DAAM2Q86T65 1068 aa12.36□□□□□ -0.43
FN1-211ENST00000443816 ATRIPQ8WXE1 791 aa12.36□□□□□ -0.43
FN1-211ENST00000443816 ANKFY1Q9P2R3 1169 aa12.36□□□□□ -0.43
FN1-211ENST00000443816 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.36□□□□□ -0.43
FN1-211ENST00000443816 KLHL30Q0D2K2 578 aa12.36□□□□□ -0.43
FN1-211ENST00000443816 FYB2Q5VWT5 728 aa12.36□□□□□ -0.43
FN1-211ENST00000443816 CPLX4Q7Z7G2 160 aa12.36□□□□□ -0.43
FN1-211ENST00000443816 ZNF577Q9BSK1 485 aa12.36□□□□□ -0.43
FN1-211ENST00000443816 TM6SF1Q9BZW5 370 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms