RNA–Protein interactions for RNA: ENST00000442985.1

SPEN-203, Transcript of spen family transcriptional repressor, humanhuman

TSL 5

Gene SPEN, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-203ENST00000442985 LTBP3Q9NS15 1303 aa6.36□□□□□ -1.39
SPEN-203ENST00000442985 LINC01387J3KSC0 135 aa6.36□□□□□ -1.39
SPEN-203ENST00000442985 DLL1O00548 723 aa6.36□□□□□ -1.39
SPEN-203ENST00000442985 NPHP1O15259 732 aa6.36□□□□□ -1.39
SPEN-203ENST00000442985 ACPPP15309 386 aa6.36□□□□□ -1.39
SPEN-203ENST00000442985 EIF4BP23588 611 aaKnown RBP6.36□□□□□ -1.39
SPEN-203ENST00000442985 CD68P34810 354 aaPredicted RBP6.36□□□□□ -1.39
SPEN-203ENST00000442985 ST5P78524 1137 aa6.36□□□□□ -1.39
SPEN-203ENST00000442985 PCDH1Q08174 1060 aa6.36□□□□□ -1.39
SPEN-203ENST00000442985 AP3B2Q13367 1082 aa6.36□□□□□ -1.39
SPEN-203ENST00000442985 DCTN1Q14203 1278 aa6.36□□□□□ -1.39
SPEN-203ENST00000442985 SETDB1Q15047 1291 aa6.36□□□□□ -1.39
SPEN-203ENST00000442985 STYK1Q6J9G0 422 aa6.36□□□□□ -1.39
SPEN-203ENST00000442985 EPS8L3Q8TE67 593 aaKnown RBP6.36□□□□□ -1.39
SPEN-203ENST00000442985 MASTLQ96GX5 879 aa6.36□□□□□ -1.39
SPEN-203ENST00000442985 BCO2Q9BYV7 579 aa6.36□□□□□ -1.39
SPEN-203ENST00000442985 ZNF576Q9H609 170 aa6.36□□□□□ -1.39
SPEN-203ENST00000442985 C12orf49Q9H741 205 aa6.36□□□□□ -1.39
SPEN-203ENST00000442985 MRS2Q9HD23 443 aa6.36□□□□□ -1.39
SPEN-203ENST00000442985 ZNF277Q9NRM2 450 aaPredicted RBP6.36□□□□□ -1.39
SPEN-203ENST00000442985 SAMM50Q9Y512 469 aa6.36□□□□□ -1.39
SPEN-203ENST00000442985 COL4A5P29400 1685 aa6.36□□□□□ -1.39
SPEN-203ENST00000442985 PASKQ96RG2 1323 aa6.35□□□□□ -1.39
SPEN-203ENST00000442985 SCN4AP35499 1836 aa6.35□□□□□ -1.39
SPEN-203ENST00000442985 FOXN1O15353 648 aa6.35□□□□□ -1.39
SPEN-203ENST00000442985 B3GALT4O96024 378 aa6.35□□□□□ -1.39
SPEN-203ENST00000442985 CYP11A1P05108 521 aa6.35□□□□□ -1.39
SPEN-203ENST00000442985 HLFQ16534 295 aa6.35□□□□□ -1.39
SPEN-203ENST00000442985 VN1R5Q7Z5H4 357 aa6.35□□□□□ -1.39
SPEN-203ENST00000442985 NBPF5PQ86XG9 351 aaPredicted RBP6.35□□□□□ -1.39
SPEN-203ENST00000442985 BCL2L13Q9BXK5 485 aa6.35□□□□□ -1.39
SPEN-203ENST00000442985 TEX13AQ9BXU3 409 aaPredicted RBP6.35□□□□□ -1.39
SPEN-203ENST00000442985 SH2B1Q9NRF2 756 aaPredicted RBP6.35□□□□□ -1.39
SPEN-203ENST00000442985 ADAMTSL1Q8N6G6 1762 aa6.35□□□□□ -1.39
SPEN-203ENST00000442985 CNTNAP1P78357 1384 aa6.34□□□□□ -1.39
SPEN-203ENST00000442985 ABCC12Q96J65 1359 aa6.34□□□□□ -1.39
SPEN-203ENST00000442985 NPC1L1Q9UHC9 1359 aa6.34□□□□□ -1.39
SPEN-203ENST00000442985 LTBP1Q14766 1721 aa6.34□□□□□ -1.39
SPEN-203ENST00000442985 RNF123Q5XPI4 1314 aa6.34□□□□□ -1.39
SPEN-203ENST00000442985 UNCXA6NJT0 531 aa6.34□□□□□ -1.39
SPEN-203ENST00000442985 DEAF1O75398 565 aaPredicted RBP6.34□□□□□ -1.39
SPEN-203ENST00000442985 ESRRAP11474 423 aaPredicted RBP6.34□□□□□ -1.39
SPEN-203ENST00000442985 TAGLNQ01995 201 aaKnown RBP6.34□□□□□ -1.39
SPEN-203ENST00000442985 PSMD2Q13200 908 aa6.34□□□□□ -1.39
SPEN-203ENST00000442985 CCDC93Q567U6 631 aa6.34□□□□□ -1.39
SPEN-203ENST00000442985 DIEXFQ68CQ4 756 aaKnown RBP6.34□□□□□ -1.39
SPEN-203ENST00000442985 TMEM130Q8N3G9 435 aa6.34□□□□□ -1.39
SPEN-203ENST00000442985 GIPC2Q8TF65 315 aa6.34□□□□□ -1.39
SPEN-203ENST00000442985 HHIPQ96QV1 700 aa6.34□□□□□ -1.39
SPEN-203ENST00000442985 CEP41Q9BYV8 373 aa6.34□□□□□ -1.39
SPEN-203ENST00000442985 TAF1DQ9H5J8 278 aaPredicted RBP6.34□□□□□ -1.39
SPEN-203ENST00000442985 MIS18AQ9NYP9 233 aa6.34□□□□□ -1.39
SPEN-203ENST00000442985 NIP7Q9Y221 180 aaKnown RBP eCLIP6.34□□□□□ -1.39
SPEN-203ENST00000442985 LAMB4A4D0S4 1761 aa6.34□□□□□ -1.4
SPEN-203ENST00000442985 SNED1Q8TER0 1413 aa6.33□□□□□ -1.4
SPEN-203ENST00000442985 RBM47A0AV96 593 aaKnown RBP6.33□□□□□ -1.4
SPEN-203ENST00000442985 KLRG2A4D1S0 409 aaPredicted RBP6.33□□□□□ -1.4
SPEN-203ENST00000442985 SNRPA1P09661 255 aaKnown RBP6.33□□□□□ -1.4
SPEN-203ENST00000442985 U2AF1L5P0DN76 240 aaPredicted RBP6.33□□□□□ -1.4
SPEN-203ENST00000442985 NPR1P16066 1061 aa6.33□□□□□ -1.4
SPEN-203ENST00000442985 GRIA4P48058 902 aa6.33□□□□□ -1.4
SPEN-203ENST00000442985 FCGRTP55899 365 aa6.33□□□□□ -1.4
SPEN-203ENST00000442985 U2AF1Q01081 240 aaKnown RBP eCLIP6.33□□□□□ -1.4
SPEN-203ENST00000442985 MAP1SQ66K74 1059 aaPredicted RBP6.33□□□□□ -1.4
SPEN-203ENST00000442985 FBXO33Q7Z6M2 555 aa6.33□□□□□ -1.4
SPEN-203ENST00000442985 TXNRD3Q86VQ6 643 aa6.33□□□□□ -1.4
SPEN-203ENST00000442985 LDHDQ86WU2 507 aa6.33□□□□□ -1.4
SPEN-203ENST00000442985 NGEFQ8N5V2 710 aa6.33□□□□□ -1.4
SPEN-203ENST00000442985 SLC7A3Q8WY07 619 aa6.33□□□□□ -1.4
SPEN-203ENST00000442985 DLG5Q8TDM6 1919 aa6.33□□□□□ -1.4
SPEN-203ENST00000442985 NUP98P52948 1817 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 KDM3BQ7LBC6 1761 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 KRBA1A5PL33 1030 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 IQCA1LA6NCM1 817 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 FAM229AH3BQW9 127 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 TRPA1O75762 1119 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 ZNF16P17020 682 aaPredicted RBP6.32□□□□□ -1.4
SPEN-203ENST00000442985 PPP2R1AP30153 589 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 EPHX2P34913 555 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 IARSP41252 1262 aaKnown RBP6.32□□□□□ -1.4
SPEN-203ENST00000442985 GSK3AP49840 483 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 ADGRE1Q14246 886 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 DUOXA2Q1HG44 320 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 UVSSAQ2YD98 709 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 SOGA3Q5TF21 947 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 NXPE4Q6UWF7 544 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 CLEC4GQ6UXB4 293 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 TMC4Q7Z404 712 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 SYNE4Q8N205 404 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 GLIS3Q8NEA6 775 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 RTF1Q92541 710 aaKnown RBP6.32□□□□□ -1.4
SPEN-203ENST00000442985 DUSP9Q99956 384 aaKnown RBP6.32□□□□□ -1.4
SPEN-203ENST00000442985 THUMPD2Q9BTF0 503 aaKnown RBP6.32□□□□□ -1.4
SPEN-203ENST00000442985 RNF208Q9H0X6 261 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 AKTIPQ9H8T0 292 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 TMEM39AQ9NV64 488 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 HACL1Q9UJ83 578 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 ZNF652Q9Y2D9 606 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 AK5Q9Y6K8 562 aa6.32□□□□□ -1.4
SPEN-203ENST00000442985 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms