RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 CCDC12Q8WUD4 166 aaPredicted RBP10.49□□□□□ -0.73
NR1I3-211ENST00000442691 KHSRPQ92945 711 aaKnown RBP eCLIP10.49□□□□□ -0.73
NR1I3-211ENST00000442691 PHKBQ93100 1093 aa10.49□□□□□ -0.73
NR1I3-211ENST00000442691 CCDC102AQ96A19 550 aa10.49□□□□□ -0.73
NR1I3-211ENST00000442691 TMEM39BQ9GZU3 492 aa10.49□□□□□ -0.73
NR1I3-211ENST00000442691 DEFB129Q9H1M3 183 aa10.49□□□□□ -0.73
NR1I3-211ENST00000442691 CDHR5Q9HBB8 845 aa10.49□□□□□ -0.73
NR1I3-211ENST00000442691 GPBP1L1Q9HC44 474 aaPredicted RBP10.49□□□□□ -0.73
NR1I3-211ENST00000442691 BRMS1Q9HCU9 246 aa10.49□□□□□ -0.73
NR1I3-211ENST00000442691 CLIP2Q9UDT6 1046 aa10.49□□□□□ -0.73
NR1I3-211ENST00000442691 HACL1Q9UJ83 578 aa10.49□□□□□ -0.73
NR1I3-211ENST00000442691 IQCA1LA6NCM1 817 aa10.48□□□□□ -0.73
NR1I3-211ENST00000442691 MPHOSPH10O00566 681 aaKnown RBP10.48□□□□□ -0.73
NR1I3-211ENST00000442691 CTNND1O60716 968 aaKnown RBP10.48□□□□□ -0.73
NR1I3-211ENST00000442691 PLA2G6O60733 806 aa10.48□□□□□ -0.73
NR1I3-211ENST00000442691 PLEKHA8P1O95397 391 aa10.48□□□□□ -0.73
NR1I3-211ENST00000442691 GUCY1A2P33402 732 aa10.48□□□□□ -0.73
NR1I3-211ENST00000442691 ZNF543Q08ER8 600 aa10.48□□□□□ -0.73
NR1I3-211ENST00000442691 PKN1Q16512 942 aa10.48□□□□□ -0.73
NR1I3-211ENST00000442691 KLHL40Q2TBA0 621 aa10.48□□□□□ -0.73
NR1I3-211ENST00000442691 TBC1D10BQ4KMP7 808 aaPredicted RBP10.48□□□□□ -0.73
NR1I3-211ENST00000442691 KRT40Q6A162 431 aa10.48□□□□□ -0.73
NR1I3-211ENST00000442691 GPR153Q6NV75 609 aa10.48□□□□□ -0.73
NR1I3-211ENST00000442691 CCDC144CPQ8IYA2 1237 aa10.48□□□□□ -0.73
NR1I3-211ENST00000442691 DAGLBQ8NCG7 672 aa10.48□□□□□ -0.73
NR1I3-211ENST00000442691 RIOX1Q9H6W3 641 aa10.48□□□□□ -0.73
NR1I3-211ENST00000442691 NPDC1Q9NQX5 325 aaPredicted RBP10.48□□□□□ -0.73
NR1I3-211ENST00000442691 ZNF112Q9UJU3 913 aa10.48□□□□□ -0.73
NR1I3-211ENST00000442691 ZBTB21Q9ULJ3 1066 aa10.48□□□□□ -0.73
NR1I3-211ENST00000442691 TMX2Q9Y320 296 aa10.48□□□□□ -0.73
NR1I3-211ENST00000442691 ESYT2A0FGR8 921 aa10.47□□□□□ -0.73
NR1I3-211ENST00000442691 GLTPD2A6NH11 291 aa10.47□□□□□ -0.73
NR1I3-211ENST00000442691 SOCS7O14512 581 aa10.47□□□□□ -0.73
NR1I3-211ENST00000442691 YEATS4O95619 227 aa10.47□□□□□ -0.73
NR1I3-211ENST00000442691 GH2P01242 217 aa10.47□□□□□ -0.73
NR1I3-211ENST00000442691 SEPT2Q15019 361 aa10.47□□□□□ -0.73
NR1I3-211ENST00000442691 GPR162Q16538 588 aa10.47□□□□□ -0.73
NR1I3-211ENST00000442691 TSR1Q2NL82 804 aaKnown RBP10.47□□□□□ -0.73
NR1I3-211ENST00000442691 SUPT20HL1Q3ZLR7 823 aa10.47□□□□□ -0.73
NR1I3-211ENST00000442691 MCTP1Q6DN14 999 aa10.47□□□□□ -0.73
NR1I3-211ENST00000442691 SAMD7Q7Z3H4 446 aa10.47□□□□□ -0.73
NR1I3-211ENST00000442691 RAB11FIP4Q86YS3 637 aa10.47□□□□□ -0.73
NR1I3-211ENST00000442691 ZNF454Q8N9F8 522 aa10.47□□□□□ -0.73
NR1I3-211ENST00000442691 RRP36Q96EU6 259 aaKnown RBP10.47□□□□□ -0.73
NR1I3-211ENST00000442691 PHF20Q9BVI0 1012 aa10.47□□□□□ -0.73
NR1I3-211ENST00000442691 ZNF341Q9BYN7 854 aa10.47□□□□□ -0.73
NR1I3-211ENST00000442691 GLT8D2Q9H1C3 349 aa10.47□□□□□ -0.73
NR1I3-211ENST00000442691 KDM4CQ9H3R0 1056 aa10.47□□□□□ -0.73
NR1I3-211ENST00000442691 GOPCQ9HD26 462 aa10.47□□□□□ -0.73
NR1I3-211ENST00000442691 LMBRD1Q9NUN5 540 aa10.47□□□□□ -0.73
NR1I3-211ENST00000442691 POLR3EQ9NVU0 708 aa10.47□□□□□ -0.73
NR1I3-211ENST00000442691 SEC63Q9UGP8 760 aaKnown RBP10.47□□□□□ -0.73
NR1I3-211ENST00000442691 V9GY48 417 aaPredicted RBP10.47□□□□□ -0.73
NR1I3-211ENST00000442691 SHTN1A0MZ66 631 aa10.46□□□□□ -0.73
NR1I3-211ENST00000442691 PHF20L1A8MW92 1017 aa10.46□□□□□ -0.73
NR1I3-211ENST00000442691 BMP15O95972 392 aa10.46□□□□□ -0.73
NR1I3-211ENST00000442691 EGFRP00533 1210 aa10.46□□□□□ -0.73
NR1I3-211ENST00000442691 EEF2P13639 858 aaKnown RBP10.46□□□□□ -0.73
NR1I3-211ENST00000442691 NCLP19338 710 aaKnown RBP10.46□□□□□ -0.73
NR1I3-211ENST00000442691 TRAPPC10P48553 1259 aa10.46□□□□□ -0.73
NR1I3-211ENST00000442691 UBE2HP62256 183 aa10.46□□□□□ -0.73
NR1I3-211ENST00000442691 RILPL1Q5EBL4 403 aa10.46□□□□□ -0.73
NR1I3-211ENST00000442691 NOL9Q5SY16 702 aaKnown RBP10.46□□□□□ -0.73
NR1I3-211ENST00000442691 MYSM1Q5VVJ2 828 aa10.46□□□□□ -0.73
NR1I3-211ENST00000442691 MCTP2Q6DN12 878 aa10.46□□□□□ -0.73
NR1I3-211ENST00000442691 BTNL9Q6UXG8 535 aa10.46□□□□□ -0.73
NR1I3-211ENST00000442691 NOSTRINQ8IVI9 506 aa10.46□□□□□ -0.73
NR1I3-211ENST00000442691 TRPM4Q8TD43 1214 aa10.46□□□□□ -0.73
NR1I3-211ENST00000442691 LPAR1Q92633 364 aa10.46□□□□□ -0.73
NR1I3-211ENST00000442691 ZDHHC16Q969W1 377 aa10.46□□□□□ -0.73
NR1I3-211ENST00000442691 MTMR8Q96EF0 704 aa10.46□□□□□ -0.73
NR1I3-211ENST00000442691 BARHL2Q9NY43 387 aa10.46□□□□□ -0.73
NR1I3-211ENST00000442691 GGA3Q9NZ52 723 aa10.46□□□□□ -0.73
NR1I3-211ENST00000442691 RTEL1Q9NZ71 1219 aa10.46□□□□□ -0.73
NR1I3-211ENST00000442691 WDR90Q96KV7 1748 aa10.46□□□□□ -0.74
NR1I3-211ENST00000442691 SCN4AP35499 1836 aa10.46□□□□□ -0.74
NR1I3-211ENST00000442691 UNCXA6NJT0 531 aa10.45□□□□□ -0.74
NR1I3-211ENST00000442691 TRAK2O60296 914 aa10.45□□□□□ -0.74
NR1I3-211ENST00000442691 DDNO94850 711 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-211ENST00000442691 EPS15P42566 896 aa10.45□□□□□ -0.74
NR1I3-211ENST00000442691 SLC1A4P43007 532 aa10.45□□□□□ -0.74
NR1I3-211ENST00000442691 NASPP49321 788 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-211ENST00000442691 DNM1Q05193 864 aaKnown RBP10.45□□□□□ -0.74
NR1I3-211ENST00000442691 GNL2Q13823 731 aaKnown RBP10.45□□□□□ -0.74
NR1I3-211ENST00000442691 ANGEL2Q5VTE6 544 aaKnown RBP10.45□□□□□ -0.74
NR1I3-211ENST00000442691 USP48Q86UV5 1035 aa10.45□□□□□ -0.74
NR1I3-211ENST00000442691 FERMT3Q86UX7 667 aa10.45□□□□□ -0.74
NR1I3-211ENST00000442691 PNMA8AQ86V59 439 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-211ENST00000442691 SIAH1Q8IUQ4 282 aa10.45□□□□□ -0.74
NR1I3-211ENST00000442691 DIS3L2Q8IYB7 885 aaKnown RBP10.45□□□□□ -0.74
NR1I3-211ENST00000442691 LRRC47Q8N1G4 583 aaKnown RBP10.45□□□□□ -0.74
NR1I3-211ENST00000442691 STAG2Q8N3U4 1231 aa10.45□□□□□ -0.74
NR1I3-211ENST00000442691 BICD2Q8TD16 824 aa10.45□□□□□ -0.74
NR1I3-211ENST00000442691 KCNG4Q8TDN1 519 aa10.45□□□□□ -0.74
NR1I3-211ENST00000442691 KIAA1683Q9H0B3 1180 aa10.45□□□□□ -0.74
NR1I3-211ENST00000442691 RCOR1Q9UKL0 485 aa10.45□□□□□ -0.74
NR1I3-211ENST00000442691 PNMA2Q9UL42 364 aa10.45□□□□□ -0.74
NR1I3-211ENST00000442691 PNMA6FA0A0J9YX94 578 aa10.44□□□□□ -0.74
NR1I3-211ENST00000442691 FAM196BA6NMK8 535 aa10.44□□□□□ -0.74
NR1I3-211ENST00000442691 USP17L5A8MUK1 530 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms