RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 GRK7Q8WTQ7 553 aa17.49■□□□□ 0.39
PTPN13-204ENST00000436978 PFKFB2O60825 505 aa17.49■□□□□ 0.39
PTPN13-204ENST00000436978 UBE3CQ15386 1083 aa17.49■□□□□ 0.39
PTPN13-204ENST00000436978 BEND3Q5T5X7 828 aa17.49■□□□□ 0.39
PTPN13-204ENST00000436978 PAGR1Q9BTK6 254 aa17.49■□□□□ 0.39
PTPN13-204ENST00000436978 LSM14BQ9BX40 385 aaKnown RBP17.49■□□□□ 0.39
PTPN13-204ENST00000436978 TMEM94Q12767 1356 aa17.49■□□□□ 0.39
PTPN13-204ENST00000436978 KRT81Q14533 505 aa17.49■□□□□ 0.39
PTPN13-204ENST00000436978 GPR108Q9NPR9 543 aa17.49■□□□□ 0.39
PTPN13-204ENST00000436978 CLTCQ00610 1675 aaKnown RBP17.49■□□□□ 0.39
PTPN13-204ENST00000436978 K7ENM7 598 aa17.49■□□□□ 0.39
PTPN13-204ENST00000436978 CD19P15391 556 aa17.49■□□□□ 0.39
PTPN13-204ENST00000436978 BCAMP50895 628 aa17.49■□□□□ 0.39
PTPN13-204ENST00000436978 PAK2Q13177 524 aa17.49■□□□□ 0.39
PTPN13-204ENST00000436978 C1orf112Q9NSG2 853 aa17.49■□□□□ 0.39
PTPN13-204ENST00000436978 POLR1AO95602 1720 aaPredicted RBP17.49■□□□□ 0.39
PTPN13-204ENST00000436978 LONP1P36776 959 aaKnown RBP17.48■□□□□ 0.39
PTPN13-204ENST00000436978 GPATCH4Q5T3I0 446 aaKnown RBP17.48■□□□□ 0.39
PTPN13-204ENST00000436978 PFDN4Q9NQP4 134 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 THRAP3Q9Y2W1 955 aaKnown RBP17.48■□□□□ 0.39
PTPN13-204ENST00000436978 SEC24BO95487 1268 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 STAT1P42224 750 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 GYG1P46976 350 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 ANKRD35Q8N283 1001 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 CCDC17Q96LX7 622 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 USTQ9Y2C2 406 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 RABGAP1Q9Y3P9 1069 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 NDUFB9Q9Y6M9 179 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 ABCC3O15438 1527 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 FOSP01100 380 aaPredicted RBP17.48■□□□□ 0.39
PTPN13-204ENST00000436978 KCNJ18B7U540 433 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 KCNJ12Q14500 433 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 DENND2CQ68D51 928 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 CCDC24Q8N4L8 307 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 TAB2Q9NYJ8 693 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 AMFRQ9UKV5 643 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 SOS2Q07890 1332 aaPredicted RBP17.48■□□□□ 0.39
PTPN13-204ENST00000436978 RGS12O14924 1447 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 KLRF2D3W0D1 207 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 HSPD1P10809 573 aaKnown RBP17.48■□□□□ 0.39
PTPN13-204ENST00000436978 ZNF445P59923 1031 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 CCNA1P78396 465 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 FANCBQ8NB91 859 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 UNC13BO14795 1591 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 POLGP54098 1239 aaPredicted RBP17.48■□□□□ 0.39
PTPN13-204ENST00000436978 RAD51AP2Q09MP3 1159 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 MORC3Q14149 939 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 RNF17Q9BXT8 1623 aaKnown RBP17.48■□□□□ 0.39
PTPN13-204ENST00000436978 TCP10L2B9ZVM9 353 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 LTKP29376 864 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 ME3Q16798 604 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 GBP6Q6ZN66 633 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 P3H4Q92791 437 aa17.48■□□□□ 0.39
PTPN13-204ENST00000436978 CAMSAP1Q5T5Y3 1602 aa17.47■□□□□ 0.39
PTPN13-204ENST00000436978 hCG_1984214I3L0E3 225 aa17.47■□□□□ 0.39
PTPN13-204ENST00000436978 TTLL1O95922 423 aa17.47■□□□□ 0.39
PTPN13-204ENST00000436978 OSBPP22059 807 aa17.47■□□□□ 0.39
PTPN13-204ENST00000436978 PDE6CP51160 858 aa17.47■□□□□ 0.39
PTPN13-204ENST00000436978 PNOCQ13519 176 aa17.47■□□□□ 0.39
PTPN13-204ENST00000436978 PDZD4Q76G19 769 aaPredicted RBP17.47■□□□□ 0.39
PTPN13-204ENST00000436978 ZNF713Q8N859 430 aaPredicted RBP17.47■□□□□ 0.39
PTPN13-204ENST00000436978 RSAD2Q8WXG1 361 aa17.47■□□□□ 0.39
PTPN13-204ENST00000436978 CCPG1Q9ULG6 757 aa17.47■□□□□ 0.39
PTPN13-204ENST00000436978 VIMP08670 466 aaKnown RBP17.47■□□□□ 0.39
PTPN13-204ENST00000436978 USP44Q9H0E7 712 aa17.47■□□□□ 0.39
PTPN13-204ENST00000436978 CUEDC2Q9H467 287 aa17.47■□□□□ 0.39
PTPN13-204ENST00000436978 CLTCL1P53675 1640 aa17.47■□□□□ 0.39
PTPN13-204ENST00000436978 ALAS1P13196 640 aa17.47■□□□□ 0.39
PTPN13-204ENST00000436978 PHBP35232 272 aa17.47■□□□□ 0.39
PTPN13-204ENST00000436978 TECP42680 631 aa17.47■□□□□ 0.39
PTPN13-204ENST00000436978 TFDP1Q14186 410 aa17.47■□□□□ 0.39
PTPN13-204ENST00000436978 ARHGAP27Q6ZUM4 889 aa17.47■□□□□ 0.39
PTPN13-204ENST00000436978 CACYBPQ9HB71 228 aaKnown RBP17.47■□□□□ 0.39
PTPN13-204ENST00000436978 COL4A3BPQ9Y5P4 624 aa17.47■□□□□ 0.39
PTPN13-204ENST00000436978 CCDC105Q8IYK2 499 aa17.47■□□□□ 0.39
PTPN13-204ENST00000436978 CASC4Q6P4E1 433 aa17.46■□□□□ 0.39
PTPN13-204ENST00000436978 HSPA1LP34931 641 aa17.46■□□□□ 0.39
PTPN13-204ENST00000436978 CCDC62Q6P9F0 684 aa17.46■□□□□ 0.39
PTPN13-204ENST00000436978 NELFCDQ8IXH7 590 aa17.46■□□□□ 0.39
PTPN13-204ENST00000436978 IL17REQ8NFR9 667 aa17.46■□□□□ 0.39
PTPN13-204ENST00000436978 TRIM58Q8NG06 486 aa17.46■□□□□ 0.39
PTPN13-204ENST00000436978 SDR42E1Q8WUS8 393 aa17.46■□□□□ 0.39
PTPN13-204ENST00000436978 TNKSO95271 1327 aa17.46■□□□□ 0.39
PTPN13-204ENST00000436978 ADGRL3Q9HAR2 1447 aa17.46■□□□□ 0.39
PTPN13-204ENST00000436978 JAK2O60674 1132 aa17.46■□□□□ 0.39
PTPN13-204ENST00000436978 PDE8BO95263 885 aa17.46■□□□□ 0.39
PTPN13-204ENST00000436978 LRRC47Q8N1G4 583 aaKnown RBP17.46■□□□□ 0.39
PTPN13-204ENST00000436978 METTL14Q9HCE5 456 aaKnown RBP17.46■□□□□ 0.39
PTPN13-204ENST00000436978 OGFRQ9NZT2 677 aa17.46■□□□□ 0.39
PTPN13-204ENST00000436978 BLZF1Q9H2G9 400 aa17.46■□□□□ 0.39
PTPN13-204ENST00000436978 FAM178BQ8IXR5 827 aa17.46■□□□□ 0.39
PTPN13-204ENST00000436978 DNAJC21Q5F1R6 531 aaKnown RBP17.46■□□□□ 0.39
PTPN13-204ENST00000436978 XKR9Q5GH70 373 aa17.46■□□□□ 0.39
PTPN13-204ENST00000436978 FAM193BQ96PV7 902 aaPredicted RBP17.46■□□□□ 0.39
PTPN13-204ENST00000436978 ZSWIM6Q9HCJ5 1215 aa17.46■□□□□ 0.39
PTPN13-204ENST00000436978 NRBP2Q9NSY0 501 aa17.46■□□□□ 0.39
PTPN13-204ENST00000436978 CYP2J2P51589 502 aa17.46■□□□□ 0.38
PTPN13-204ENST00000436978 MYSM1Q5VVJ2 828 aa17.46■□□□□ 0.38
PTPN13-204ENST00000436978 QTRT2Q9H974 415 aaKnown RBP17.46■□□□□ 0.38
PTPN13-204ENST00000436978 PPP2R5AQ15172 486 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms