RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 MYH8P13535 1937 aa13.11□□□□□ -0.31
SPTLC1P4-201ENST00000435997 F5H6K3 240 aa13.11□□□□□ -0.31
SPTLC1P4-201ENST00000435997 GPAA1O43292 621 aa13.11□□□□□ -0.31
SPTLC1P4-201ENST00000435997 PGK1P00558 417 aa13.11□□□□□ -0.31
SPTLC1P4-201ENST00000435997 AKR1A1P14550 325 aa13.11□□□□□ -0.31
SPTLC1P4-201ENST00000435997 KLRC3Q07444 240 aa13.11□□□□□ -0.31
SPTLC1P4-201ENST00000435997 SHHQ15465 462 aa13.11□□□□□ -0.31
SPTLC1P4-201ENST00000435997 TSHZ3Q63HK5 1081 aa13.11□□□□□ -0.31
SPTLC1P4-201ENST00000435997 SAMD1Q6SPF0 538 aaPredicted RBP13.11□□□□□ -0.31
SPTLC1P4-201ENST00000435997 BADQ92934 168 aa13.11□□□□□ -0.31
SPTLC1P4-201ENST00000435997 FGD4Q96M96 766 aa13.11□□□□□ -0.31
SPTLC1P4-201ENST00000435997 RIPK3Q9Y572 518 aa13.11□□□□□ -0.31
SPTLC1P4-201ENST00000435997 CUL9Q8IWT3 2517 aa13.11□□□□□ -0.31
SPTLC1P4-201ENST00000435997 A0A1W2PQ45 241 aaPredicted RBP13.1□□□□□ -0.31
SPTLC1P4-201ENST00000435997 A0A1W2PQY0 241 aa13.1□□□□□ -0.31
SPTLC1P4-201ENST00000435997 M0R2C6 588 aa13.1□□□□□ -0.31
SPTLC1P4-201ENST00000435997 RNF113AO15541 343 aaKnown RBP13.1□□□□□ -0.31
SPTLC1P4-201ENST00000435997 SNAI1O95863 264 aaPredicted RBP13.1□□□□□ -0.31
SPTLC1P4-201ENST00000435997 ZFYP08048 801 aaPredicted RBP13.1□□□□□ -0.31
SPTLC1P4-201ENST00000435997 TLE2Q04725 743 aa13.1□□□□□ -0.31
SPTLC1P4-201ENST00000435997 SNRNP48Q6IEG0 339 aaKnown RBP13.1□□□□□ -0.31
SPTLC1P4-201ENST00000435997 CCSAPQ6IQ19 270 aaPredicted RBP13.1□□□□□ -0.31
SPTLC1P4-201ENST00000435997 ANKRD33Q7Z3H0 272 aa13.1□□□□□ -0.31
SPTLC1P4-201ENST00000435997 ZNF467Q7Z7K2 595 aaPredicted RBP13.1□□□□□ -0.31
SPTLC1P4-201ENST00000435997 RNF180Q86T96 592 aa13.1□□□□□ -0.31
SPTLC1P4-201ENST00000435997 KLHDC9Q8NEP7 349 aa13.1□□□□□ -0.31
SPTLC1P4-201ENST00000435997 MKL1Q969V6 931 aa13.1□□□□□ -0.31
SPTLC1P4-201ENST00000435997 FERMT2Q96AC1 680 aa13.1□□□□□ -0.31
SPTLC1P4-201ENST00000435997 CEP95Q96GE4 821 aa13.1□□□□□ -0.31
SPTLC1P4-201ENST00000435997 PRDM5Q9NQX1 630 aaPredicted RBP13.1□□□□□ -0.31
SPTLC1P4-201ENST00000435997 COL11A1P12107 1806 aaPredicted RBP13.1□□□□□ -0.31
SPTLC1P4-201ENST00000435997 SYNRGQ9UMZ2 1314 aa13.1□□□□□ -0.31
SPTLC1P4-201ENST00000435997 KIAA0355O15063 1070 aa13.09□□□□□ -0.31
SPTLC1P4-201ENST00000435997 CLTBP09497 229 aa13.09□□□□□ -0.31
SPTLC1P4-201ENST00000435997 GNAT2P19087 354 aa13.09□□□□□ -0.31
SPTLC1P4-201ENST00000435997 CST5P28325 142 aaPredicted RBP13.09□□□□□ -0.31
SPTLC1P4-201ENST00000435997 SMAD3P84022 425 aaKnown RBP13.09□□□□□ -0.31
SPTLC1P4-201ENST00000435997 ZNF697Q5TEC3 545 aa13.09□□□□□ -0.31
SPTLC1P4-201ENST00000435997 PRPF38AQ8NAV1 312 aaKnown RBP13.09□□□□□ -0.31
SPTLC1P4-201ENST00000435997 GMCL1P1Q8NEA9 526 aa13.09□□□□□ -0.31
SPTLC1P4-201ENST00000435997 PI4K2BQ8TCG2 481 aa13.09□□□□□ -0.31
SPTLC1P4-201ENST00000435997 TSEN34Q9BSV6 310 aaKnown RBP13.09□□□□□ -0.31
SPTLC1P4-201ENST00000435997 SLC38A10Q9HBR0 1119 aa13.09□□□□□ -0.31
SPTLC1P4-201ENST00000435997 MTMR4Q9NYA4 1195 aa13.09□□□□□ -0.31
SPTLC1P4-201ENST00000435997 CNPY2Q9Y2B0 182 aa13.09□□□□□ -0.31
SPTLC1P4-201ENST00000435997 TACC3Q9Y6A5 838 aa13.09□□□□□ -0.31
SPTLC1P4-201ENST00000435997 ADCY6O43306 1168 aa13.08□□□□□ -0.32
SPTLC1P4-201ENST00000435997 MYCNP04198 464 aaPredicted RBP13.08□□□□□ -0.32
SPTLC1P4-201ENST00000435997 OAZ1P54368 228 aa13.08□□□□□ -0.32
SPTLC1P4-201ENST00000435997 GPATCH3Q96I76 525 aa13.08□□□□□ -0.32
SPTLC1P4-201ENST00000435997 TOX2Q96NM4 488 aa13.08□□□□□ -0.32
SPTLC1P4-201ENST00000435997 MKNK2Q9HBH9 465 aa13.08□□□□□ -0.32
SPTLC1P4-201ENST00000435997 TTC41PQ6P2S7 1318 aa13.08□□□□□ -0.32
SPTLC1P4-201ENST00000435997 MYADML2A6NDP7 307 aa13.07□□□□□ -0.32
SPTLC1P4-201ENST00000435997 MOXD2PA6NHM9 499 aa13.07□□□□□ -0.32
SPTLC1P4-201ENST00000435997 MINDY4BA8MYZ0 360 aa13.07□□□□□ -0.32
SPTLC1P4-201ENST00000435997 FOXP2O15409 715 aa13.07□□□□□ -0.32
SPTLC1P4-201ENST00000435997 RAD21O60216 631 aa13.07□□□□□ -0.32
SPTLC1P4-201ENST00000435997 TTLL1O95922 423 aa13.07□□□□□ -0.32
SPTLC1P4-201ENST00000435997 TDO2P48775 406 aa13.07□□□□□ -0.32
SPTLC1P4-201ENST00000435997 EPHB4P54760 987 aa13.07□□□□□ -0.32
SPTLC1P4-201ENST00000435997 NKX3-2P78367 333 aa13.07□□□□□ -0.32
SPTLC1P4-201ENST00000435997 FAAP100Q0VG06 881 aa13.07□□□□□ -0.32
SPTLC1P4-201ENST00000435997 LRRC47Q8N1G4 583 aaKnown RBP13.07□□□□□ -0.32
SPTLC1P4-201ENST00000435997 KATNBL1Q9H079 304 aa13.07□□□□□ -0.32
SPTLC1P4-201ENST00000435997 UPF3AQ9H1J1 476 aaKnown RBP13.07□□□□□ -0.32
SPTLC1P4-201ENST00000435997 TTYH1Q9H313 450 aaPredicted RBP13.07□□□□□ -0.32
SPTLC1P4-201ENST00000435997 ZNF287Q9HBT7 754 aa13.07□□□□□ -0.32
SPTLC1P4-201ENST00000435997 FEM1BQ9UK73 627 aa13.07□□□□□ -0.32
SPTLC1P4-201ENST00000435997 SPTBN5Q9NRC6 3674 aaKnown RBP13.07□□□□□ -0.32
SPTLC1P4-201ENST00000435997 TMEM265A0A087WTH1 108 aa13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 PQBP1O60828 265 aaKnown RBP13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 DUSP11O75319 330 aaKnown RBP13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 PRDM1O75626 825 aa13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 ACLYP53396 1101 aa13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 IFNL3Q8IZI9 196 aa13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 STK11IPQ8N1F8 1099 aa13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 CHST13Q8NET6 341 aa13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 NEDD1Q8NHV4 660 aa13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 FAM161BQ96MY7 647 aa13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 CDX2Q99626 313 aaPredicted RBP13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 SEMA6BQ9H3T3 888 aa13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 RAVER2Q9HCJ3 691 aaKnown RBP13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 STARD7Q9NQZ5 370 aa13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 CLIP2Q9UDT6 1046 aa13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 FBXO40Q9UH90 709 aa13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 TBX21Q9UL17 535 aa13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 FAM184BQ9ULE4 1060 aa13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 ZNF536O15090 1300 aa13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 SALL3Q9BXA9 1300 aa13.06□□□□□ -0.32
SPTLC1P4-201ENST00000435997 PATL2C9JE40 543 aaKnown RBP13.05□□□□□ -0.32
SPTLC1P4-201ENST00000435997 CTAGE5O15320 804 aa13.05□□□□□ -0.32
SPTLC1P4-201ENST00000435997 ZBED4O75132 1171 aa13.05□□□□□ -0.32
SPTLC1P4-201ENST00000435997 ACVR2BQ13705 512 aa13.05□□□□□ -0.32
SPTLC1P4-201ENST00000435997 ZMYM1Q5SVZ6 1142 aa13.05□□□□□ -0.32
SPTLC1P4-201ENST00000435997 ZNF444Q8N0Y2 327 aaPredicted RBP13.05□□□□□ -0.32
SPTLC1P4-201ENST00000435997 CPXCR1Q8N123 301 aa13.05□□□□□ -0.32
SPTLC1P4-201ENST00000435997 OTUD7AQ8TE49 926 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms