RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 DDX60Q8IY21 1712 aaKnown RBP8.14□□□□□ -1.11
GARNL3-205ENST00000435213 A6NHS1 94 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 EIF3HO15372 352 aaKnown RBP eCLIP8.14□□□□□ -1.11
GARNL3-205ENST00000435213 MSL3P1P0C860 447 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 EIF2S2P20042 333 aaKnown RBP8.14□□□□□ -1.11
GARNL3-205ENST00000435213 SMARCA1P28370 1054 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 HOXC9P31274 260 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 CTCFP49711 727 aaPredicted RBP8.14□□□□□ -1.11
GARNL3-205ENST00000435213 HDLBPQ00341 1268 aaKnown RBP8.14□□□□□ -1.11
GARNL3-205ENST00000435213 SH2D4BQ5SQS7 431 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 ZNF589Q86UQ0 364 aaPredicted RBP8.14□□□□□ -1.11
GARNL3-205ENST00000435213 CCDC13Q8IYE1 715 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 FNBP4Q8N3X1 1017 aaPredicted RBP8.14□□□□□ -1.11
GARNL3-205ENST00000435213 TEKT4Q8WW24 435 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 MAIP1Q8WWC4 291 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 NACC2Q96BF6 587 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 CAPS2Q9BXY5 557 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 EBF2Q9HAK2 575 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 C15orf41Q9Y2V0 281 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.14□□□□□ -1.11
GARNL3-205ENST00000435213 MGRN1O60291 552 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 PEX14O75381 377 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 LINGO3P0C6S8 592 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 KIF5BP33176 963 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 INHBCP55103 352 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 ARPC4P59998 168 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 MXRA7P84157 204 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 MYO1EQ12965 1108 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 FXNQ16595 210 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 ADALQ6DHV7 355 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 CCDC155Q8N6L0 562 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 TEX9Q8N6V9 391 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 EPC1Q9H2F5 836 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 IFNKQ9P0W0 207 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 KIAA1468Q9P260 1216 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 DBF4Q9UBU7 674 aaPredicted RBP8.14□□□□□ -1.11
GARNL3-205ENST00000435213 RAB21Q9UL25 225 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 SALL1Q9NSC2 1324 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 PTPDC1A2A3K4 754 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 GOLGA8AA7E2F4 631 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 ABLIM1O14639 778 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 IKBKBO14920 756 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 PFDN1O60925 122 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 IDO1P14902 403 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 ME1P48163 572 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 AARSP49588 968 aaKnown RBP eCLIP8.14□□□□□ -1.11
GARNL3-205ENST00000435213 CEBPZQ03701 1054 aaKnown RBP8.14□□□□□ -1.11
GARNL3-205ENST00000435213 BTG3Q14201 252 aaPredicted RBP8.14□□□□□ -1.11
GARNL3-205ENST00000435213 TSR1Q2NL82 804 aaKnown RBP8.14□□□□□ -1.11
GARNL3-205ENST00000435213 THOC7Q6I9Y2 204 aaKnown RBP8.14□□□□□ -1.11
GARNL3-205ENST00000435213 CRELD2Q6UXH1 353 aaPredicted RBP8.14□□□□□ -1.11
GARNL3-205ENST00000435213 FUKQ8N0W3 1084 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 RASSF8Q8NHQ8 419 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 SREK1Q8WXA9 508 aaKnown RBP8.14□□□□□ -1.11
GARNL3-205ENST00000435213 RSPH1Q8WYR4 309 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 OSBPL10Q9BXB5 764 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 GGA2Q9UJY4 613 aa8.14□□□□□ -1.11
GARNL3-205ENST00000435213 ZNF335Q9H4Z2 1342 aaPredicted RBP8.13□□□□□ -1.11
GARNL3-205ENST00000435213 SETD1BQ9UPS6 1966 aaKnown RBP8.13□□□□□ -1.11
GARNL3-205ENST00000435213 PHRF1Q9P1Y6 1649 aaKnown RBP8.13□□□□□ -1.11
GARNL3-205ENST00000435213 GOLGA6L10A0A0M3HER8 536 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 P4HA2O15460 535 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 ALDH3A1P30838 453 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 NLRP12P59046 1061 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 CCDC152Q4G0S7 254 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 KSR2Q6VAB6 950 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 BOLA2Q9H3K6 86 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 CDHR2Q9BYE9 1310 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 TARSL2A2RTX5 802 aaKnown RBP8.13□□□□□ -1.11
GARNL3-205ENST00000435213 STXBP3O00186 592 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 LSM1O15116 133 aaKnown RBP8.13□□□□□ -1.11
GARNL3-205ENST00000435213 KDM1AO60341 852 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 BCRP11274 1271 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 CLCN2P51788 898 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 TBC1D10BQ4KMP7 808 aaPredicted RBP8.13□□□□□ -1.11
GARNL3-205ENST00000435213 PPP1R15BQ5SWA1 713 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 NBPF14Q5TI25 921 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 TRIM65Q6PJ69 517 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 NCCRP1Q6ZVX7 275 aaPredicted RBP8.13□□□□□ -1.11
GARNL3-205ENST00000435213 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.13□□□□□ -1.11
GARNL3-205ENST00000435213 DHTKD1Q96HY7 919 aaPredicted RBP8.13□□□□□ -1.11
GARNL3-205ENST00000435213 NAP1L3Q99457 506 aaPredicted RBP8.13□□□□□ -1.11
GARNL3-205ENST00000435213 SDF4Q9BRK5 362 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 CCDC8Q9H0W5 538 aaPredicted RBP8.13□□□□□ -1.11
GARNL3-205ENST00000435213 KAT14Q9H8E8 782 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 QPCTLQ9NXS2 382 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 PARP3Q9Y6F1 533 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 XIRP1Q702N8 1843 aaKnown RBP8.13□□□□□ -1.11
GARNL3-205ENST00000435213 COL15A1P39059 1388 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 TMEM2Q9UHN6 1383 aa8.13□□□□□ -1.11
GARNL3-205ENST00000435213 CCDC166P0CW27 439 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 USP11P51784 963 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 CLEC4GQ6UXB4 293 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 PAGR1Q9BTK6 254 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 AGXT2Q9BYV1 514 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 MAP3K2Q9Y2U5 619 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 ZNF609O15014 1411 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 ANKARQ7Z5J8 1434 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 SPEF2Q9C093 1822 aa8.12□□□□□ -1.11
GARNL3-205ENST00000435213 PLEKHG1Q9ULL1 1385 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms