RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 TTBK2Q6IQ55 1244 aa17.32■□□□□ 0.36
SF1-209ENST00000433274 KCTD1Q719H9 257 aa17.32■□□□□ 0.36
SF1-209ENST00000433274 METTL16Q86W50 562 aaKnown RBP17.32■□□□□ 0.36
SF1-209ENST00000433274 ZNF579Q8NAF0 562 aaKnown RBP17.32■□□□□ 0.36
SF1-209ENST00000433274 ZMYND12Q9H0C1 365 aa17.32■□□□□ 0.36
SF1-209ENST00000433274 ICA1Q05084 483 aa17.31■□□□□ 0.36
SF1-209ENST00000433274 SPDYE2Q495Y8 402 aa17.31■□□□□ 0.36
SF1-209ENST00000433274 LONRF3Q496Y0 759 aa17.31■□□□□ 0.36
SF1-209ENST00000433274 TMEM179Q6ZVK1 233 aa17.31■□□□□ 0.36
SF1-209ENST00000433274 SGIP1Q9BQI5 828 aa17.31■□□□□ 0.36
SF1-209ENST00000433274 ANO10Q9NW15 660 aa17.31■□□□□ 0.36
SF1-209ENST00000433274 NYAP2Q9P242 653 aa17.31■□□□□ 0.36
SF1-209ENST00000433274 SMCO2A6NFE2 343 aa17.31■□□□□ 0.36
SF1-209ENST00000433274 ADCY5O95622 1261 aa17.31■□□□□ 0.36
SF1-209ENST00000433274 SLC16A2P36021 539 aa17.31■□□□□ 0.36
SF1-209ENST00000433274 ZRSR1Q15695 479 aaKnown RBP17.31■□□□□ 0.36
SF1-209ENST00000433274 USP49Q70CQ1 688 aa17.31■□□□□ 0.36
SF1-209ENST00000433274 CNNM3Q8NE01 707 aa17.31■□□□□ 0.36
SF1-209ENST00000433274 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.31■□□□□ 0.36
SF1-209ENST00000433274 CD2APQ9Y5K6 639 aa17.31■□□□□ 0.36
SF1-209ENST00000433274 MORC2Q9Y6X9 1032 aaPredicted RBP17.31■□□□□ 0.36
SF1-209ENST00000433274 COL2A1P02458 1487 aaPredicted RBP17.3■□□□□ 0.36
SF1-209ENST00000433274 GPATCH4Q5T3I0 446 aaKnown RBP17.3■□□□□ 0.36
SF1-209ENST00000433274 RBM26Q5T8P6 1007 aaKnown RBP17.3■□□□□ 0.36
SF1-209ENST00000433274 ADGRF4Q8IZF3 695 aa17.3■□□□□ 0.36
SF1-209ENST00000433274 FAM177A1Q8N128 213 aaPredicted RBP17.3■□□□□ 0.36
SF1-209ENST00000433274 FAM151AQ8WW52 585 aa17.3■□□□□ 0.36
SF1-209ENST00000433274 C6orf50Q9HD87 102 aa17.3■□□□□ 0.36
SF1-209ENST00000433274 MYH4Q9Y623 1939 aa17.3■□□□□ 0.36
SF1-209ENST00000433274 SHTN1A0MZ66 631 aa17.3■□□□□ 0.36
SF1-209ENST00000433274 BIN1O00499 593 aa17.3■□□□□ 0.36
SF1-209ENST00000433274 POLR2DO15514 142 aaKnown RBP17.3■□□□□ 0.36
SF1-209ENST00000433274 CAVIN2O95810 425 aa17.3■□□□□ 0.36
SF1-209ENST00000433274 GH2P01242 217 aa17.3■□□□□ 0.36
SF1-209ENST00000433274 JAG1P78504 1218 aa17.3■□□□□ 0.36
SF1-209ENST00000433274 ATP2C1P98194 919 aaPredicted RBP17.3■□□□□ 0.36
SF1-209ENST00000433274 RRP1BQ14684 758 aaKnown RBP17.3■□□□□ 0.36
SF1-209ENST00000433274 INF2Q27J81 1249 aa17.3■□□□□ 0.36
SF1-209ENST00000433274 KRBA2Q6ZNG9 492 aa17.3■□□□□ 0.36
SF1-209ENST00000433274 SIAH1Q8IUQ4 282 aa17.3■□□□□ 0.36
SF1-209ENST00000433274 PDILTQ8N807 584 aa17.3■□□□□ 0.36
SF1-209ENST00000433274 MKL1Q969V6 931 aa17.3■□□□□ 0.36
SF1-209ENST00000433274 FERMT2Q96AC1 680 aa17.3■□□□□ 0.36
SF1-209ENST00000433274 COA7Q96BR5 231 aa17.3■□□□□ 0.36
SF1-209ENST00000433274 JMJD4Q9H9V9 463 aa17.3■□□□□ 0.36
SF1-209ENST00000433274 BRCA1P38398 1863 aaKnown RBP17.29■□□□□ 0.36
SF1-209ENST00000433274 VWA3AA6NCI4 1184 aa17.29■□□□□ 0.36
SF1-209ENST00000433274 AP5Z1O43299 807 aa17.29■□□□□ 0.36
SF1-209ENST00000433274 GNA11P29992 359 aa17.29■□□□□ 0.36
SF1-209ENST00000433274 CNTNAP1P78357 1384 aa17.29■□□□□ 0.36
SF1-209ENST00000433274 FER1L6Q2WGJ9 1857 aa17.29■□□□□ 0.36
SF1-209ENST00000433274 SLC1A4P43007 532 aa17.29■□□□□ 0.36
SF1-209ENST00000433274 PNOCQ13519 176 aa17.29■□□□□ 0.36
SF1-209ENST00000433274 EPSTI1Q96J88 318 aa17.29■□□□□ 0.36
SF1-209ENST00000433274 HERC5Q9UII4 1024 aaKnown RBP17.29■□□□□ 0.36
SF1-209ENST00000433274 MYO1BO43795 1136 aa17.28■□□□□ 0.36
SF1-209ENST00000433274 RASSF7Q02833 373 aa17.28■□□□□ 0.36
SF1-209ENST00000433274 NBPF9Q3BBW0 867 aa17.28■□□□□ 0.36
SF1-209ENST00000433274 SLFN13Q68D06 897 aa17.28■□□□□ 0.36
SF1-209ENST00000433274 MTMR14Q8NCE2 650 aa17.28■□□□□ 0.36
SF1-209ENST00000433274 TMEM39BQ9GZU3 492 aa17.28■□□□□ 0.36
SF1-209ENST00000433274 RTN4Q9NQC3 1192 aaKnown RBP17.28■□□□□ 0.36
SF1-209ENST00000433274 PNMA6FA0A0J9YX94 578 aa17.27■□□□□ 0.36
SF1-209ENST00000433274 USP17L10C9JJH3 530 aa17.27■□□□□ 0.36
SF1-209ENST00000433274 hCG_1984214I3L0E3 225 aa17.27■□□□□ 0.36
SF1-209ENST00000433274 WNT10BO00744 389 aa17.27■□□□□ 0.36
SF1-209ENST00000433274 PTGER2P43116 358 aa17.27■□□□□ 0.36
SF1-209ENST00000433274 TNIP1Q15025 636 aa17.27■□□□□ 0.36
SF1-209ENST00000433274 CDAN1Q8IWY9 1227 aa17.27■□□□□ 0.36
SF1-209ENST00000433274 CEP57L1Q8IYX8 460 aa17.27■□□□□ 0.36
SF1-209ENST00000433274 ZNF713Q8N859 430 aaPredicted RBP17.27■□□□□ 0.36
SF1-209ENST00000433274 SYMPKQ92797 1274 aaKnown RBP17.27■□□□□ 0.36
SF1-209ENST00000433274 MYOZ2Q9NPC6 264 aa17.27■□□□□ 0.36
SF1-209ENST00000433274 SERTAD1Q9UHV2 236 aa17.27■□□□□ 0.36
SF1-209ENST00000433274 FOXN1O15353 648 aa17.27■□□□□ 0.35
SF1-209ENST00000433274 IQCB1Q15051 598 aa17.27■□□□□ 0.35
SF1-209ENST00000433274 DPCR1Q3MIW9 517 aa17.27■□□□□ 0.35
SF1-209ENST00000433274 ISM2Q6H9L7 571 aa17.27■□□□□ 0.35
SF1-209ENST00000433274 DCAF4Q8WV16 495 aa17.27■□□□□ 0.35
SF1-209ENST00000433274 UPF1Q92900 1129 aaKnown RBP eCLIP17.27■□□□□ 0.352e-19■■■■■ 36.5
SF1-209ENST00000433274 BIN2Q9UBW5 565 aaPredicted RBP17.27■□□□□ 0.35
SF1-209ENST00000433274 KRT25Q7Z3Z0 450 aa17.26■□□□□ 0.35
SF1-209ENST00000433274 ESYT2A0FGR8 921 aa17.26■□□□□ 0.35
SF1-209ENST00000433274 F5H6K3 240 aa17.26■□□□□ 0.35
SF1-209ENST00000433274 PPP1R11O60927 126 aaPredicted RBP17.26■□□□□ 0.35
SF1-209ENST00000433274 KLRC3Q07444 240 aa17.26■□□□□ 0.35
SF1-209ENST00000433274 NONOQ15233 471 aaKnown RBP eCLIP17.26■□□□□ 0.351e-6■■■■■ 28.9
SF1-209ENST00000433274 FKBP1CQ5VVH2 108 aa17.26■□□□□ 0.35
SF1-209ENST00000433274 JAKMIP3Q5VZ66 844 aa17.26■□□□□ 0.35
SF1-209ENST00000433274 REXO1Q8N1G1 1221 aaKnown RBP17.26■□□□□ 0.35
SF1-209ENST00000433274 NLGN2Q8NFZ4 835 aa17.26■□□□□ 0.35
SF1-209ENST00000433274 ZBED3Q96IU2 234 aaPredicted RBP17.26■□□□□ 0.35
SF1-209ENST00000433274 SCAF8Q9UPN6 1271 aaKnown RBP17.26■□□□□ 0.35
SF1-209ENST00000433274 A0A087X0B3 334 aa17.25■□□□□ 0.35
SF1-209ENST00000433274 GOLGA6L19H0YKK7 550 aa17.25■□□□□ 0.35
SF1-209ENST00000433274 PTMAP06454 111 aaKnown RBP17.25■□□□□ 0.35
SF1-209ENST00000433274 NLRP12P59046 1061 aa17.25■□□□□ 0.35
SF1-209ENST00000433274 IL17AQ16552 155 aa17.25■□□□□ 0.35
SF1-209ENST00000433274 MIGA2Q7L4E1 593 aa17.25■□□□□ 0.35
SF1-209ENST00000433274 C4orf32Q8N8J7 132 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms