RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 FAM81BQ96LP2 452 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 GDAP1L1Q96MZ0 367 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 ZCWPW1Q9H0M4 648 aa9.86□□□□□ -0.83
CDC42BPA-206ENST00000429440 AKR1B15C9JRZ8 316 aaPredicted RBP9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 DTNBO60941 627 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 MBD4O95243 580 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 CCDC166P0CW27 439 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 SESN3P58005 492 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 LMNB2Q03252 620 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 MTF1Q14872 753 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 POSTNQ15063 836 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 ANKRD20A2Q5SQ80 823 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 ANKRD20A1Q5TYW2 823 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 ANKRD20A3Q5VUR7 823 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 IQCEQ6IPM2 695 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 RAD9BQ6WBX8 426 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 LMNTD2Q8IXW0 634 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 KCNN1Q92952 543 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 SEC16BQ96JE7 1060 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 MEIS3Q99687 375 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 BRD8Q9H0E9 1235 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 PIDD1Q9HB75 910 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 KCNMB3Q9NPA1 279 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 CIDEBQ9UHD4 219 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 ITGB1BP2Q9UKP3 347 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 LEMD3Q9Y2U8 911 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 BZW2Q9Y6E2 419 aaKnown RBP9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 ABCC6O95255 1503 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 LTN1O94822 1766 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 FAM208AQ9UK61 1670 aaKnown RBP9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 FECHP22830 423 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 ME1P48163 572 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 EPHB4P54760 987 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 IFI16Q16666 785 aaKnown RBP9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 CCDC92Q53HC0 331 aaPredicted RBP9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 PHC3Q8NDX5 983 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 BRF1Q92994 677 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 MTRQ99707 1265 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 PREBQ9HCU5 417 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 TUBE1Q9UJT0 475 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 ATP8A1Q9Y2Q0 1164 aa9.85□□□□□ -0.83
CDC42BPA-206ENST00000429440 PALM3A6NDB9 673 aaPredicted RBP9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 SOWAHDA6NJG2 315 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 HMGB1P1B2RPK0 211 aaPredicted RBP9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 TMCC1O94876 653 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 EIF2S2P20042 333 aaKnown RBP9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 ADAM9Q13443 819 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 NECTIN1Q15223 517 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 OGFOD1Q8N543 542 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 RUFY2Q8WXA3 655 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 C19orf44Q9H6X5 657 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 PCDH18Q9HCL0 1135 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 TUBGCP4Q9UGJ1 667 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 LRRC42Q9Y546 428 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 ZNF142P52746 1687 aaPredicted RBP9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 GOLGA6L10A0A0M3HER8 536 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 PSMD14O00487 310 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 TRAPPC3O43617 180 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 PRC1O43663 620 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 RAB11FIP3O75154 756 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 FLOT1O75955 427 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 HARSP12081 509 aaKnown RBP9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 IDO1P14902 403 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 HOXC9P31274 260 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 PHEXP78562 749 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 PAPD7Q5XG87 772 aaKnown RBP9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 SYNE3Q6ZMZ3 975 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 G2E3Q7L622 706 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 CNBD1Q8NA66 436 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 SNRNP27Q8WVK2 155 aaKnown RBP9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 USP28Q96RU2 1077 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 MPHOSPH6Q99547 160 aaKnown RBP9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 NDNQ99608 321 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 CORO1BQ9BR76 489 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 OVOS2A0A0G2JMS6 1433 aa9.84□□□□□ -0.83
CDC42BPA-206ENST00000429440 CLTAP09496 248 aa9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 ZFXP17010 805 aaPredicted RBP9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 TNFRSF8P28908 595 aa9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 NDUFA8P51970 172 aa9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 NLRP6P59044 892 aa9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 NLRP5P59047 1200 aa9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 TAF11Q15544 211 aa9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 ANO7Q6IWH7 933 aa9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 ERICH1Q86X53 443 aa9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 ELOA2Q8IYF1 753 aaPredicted RBP9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 IQCKQ8N0W5 287 aa9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 CNTROBQ8N137 903 aa9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 ZBTB8BQ8NAP8 495 aaPredicted RBP9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 KIFAP3Q92845 792 aa9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 CCDC51Q96ER9 411 aa9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 MMS19Q96T76 1030 aa9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 FAM167BQ9BTA0 163 aa9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 VCX3BQ9H321 246 aa9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 VCX3AQ9NNX9 186 aa9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 PANK4Q9NVE7 773 aa9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 PAIP2BQ9ULR5 123 aaKnown RBP9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 BARX2Q9UMQ3 279 aaPredicted RBP9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 SLC12A4Q9UP95 1085 aa9.83□□□□□ -0.84
CDC42BPA-206ENST00000429440 SAR1BQ9Y6B6 198 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms