RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 GJA10Q969M2 543 aa14.01□□□□□ -0.17
CDH3-202ENST00000429102 JAKMIP2Q96AA8 810 aa14.01□□□□□ -0.17
CDH3-202ENST00000429102 PHF20Q9BVI0 1012 aa14.01□□□□□ -0.17
CDH3-202ENST00000429102 ZNHIT6Q9NWK9 470 aaKnown RBP14.01□□□□□ -0.17
CDH3-202ENST00000429102 TBC1D7Q9P0N9 293 aa14.01□□□□□ -0.17
CDH3-202ENST00000429102 L1RE1Q9UN81 338 aa14.01□□□□□ -0.17
CDH3-202ENST00000429102 RCCD1A6NED2 376 aa14□□□□□ -0.17
CDH3-202ENST00000429102 BUB1O43683 1085 aa14□□□□□ -0.17
CDH3-202ENST00000429102 MYO1BO43795 1136 aa14□□□□□ -0.17
CDH3-202ENST00000429102 KCTD16Q68DU8 428 aa14□□□□□ -0.17
CDH3-202ENST00000429102 DTHD1Q6ZMT9 781 aa14□□□□□ -0.17
CDH3-202ENST00000429102 SAR1BQ9Y6B6 198 aa14□□□□□ -0.17
CDH3-202ENST00000429102 ABCC6O95255 1503 aa14□□□□□ -0.17
CDH3-202ENST00000429102 NUTM2BA6NNL0 878 aaPredicted RBP14□□□□□ -0.17
CDH3-202ENST00000429102 NUTM2EB1AL46 878 aaPredicted RBP14□□□□□ -0.17
CDH3-202ENST00000429102 ARHGAP25P42331 645 aa14□□□□□ -0.17
CDH3-202ENST00000429102 PDE4DQ08499 809 aa14□□□□□ -0.17
CDH3-202ENST00000429102 TMC4Q7Z404 712 aa14□□□□□ -0.17
CDH3-202ENST00000429102 CARD10Q9BWT7 1032 aa14□□□□□ -0.17
CDH3-202ENST00000429102 KAT14Q9H8E8 782 aa14□□□□□ -0.17
CDH3-202ENST00000429102 MLXIPQ9HAP2 919 aa14□□□□□ -0.17
CDH3-202ENST00000429102 FBXO3Q9UK99 471 aa14□□□□□ -0.17
CDH3-202ENST00000429102 FAM205AQ6ZU69 1335 aa14□□□□□ -0.17
CDH3-202ENST00000429102 WDR19Q8NEZ3 1342 aa14□□□□□ -0.17
CDH3-202ENST00000429102 ABCC12Q96J65 1359 aa14□□□□□ -0.17
CDH3-202ENST00000429102 FAM237AA0A1B0GTK4 181 aa14□□□□□ -0.17
CDH3-202ENST00000429102 NCK2O43639 380 aa14□□□□□ -0.17
CDH3-202ENST00000429102 MYBL2P10244 700 aa14□□□□□ -0.17
CDH3-202ENST00000429102 SCG2P13521 617 aa14□□□□□ -0.17
CDH3-202ENST00000429102 TECP42680 631 aa14□□□□□ -0.17
CDH3-202ENST00000429102 PIP4K2BP78356 416 aa14□□□□□ -0.17
CDH3-202ENST00000429102 LRRC41Q15345 812 aa14□□□□□ -0.17
CDH3-202ENST00000429102 CCDC155Q8N6L0 562 aa14□□□□□ -0.17
CDH3-202ENST00000429102 HDAC7Q8WUI4 952 aa14□□□□□ -0.17
CDH3-202ENST00000429102 GNAT2P19087 354 aa13.99□□□□□ -0.17
CDH3-202ENST00000429102 FGFR2P21802 821 aa13.99□□□□□ -0.17
CDH3-202ENST00000429102 TROAPQ12815 778 aa13.99□□□□□ -0.17
CDH3-202ENST00000429102 SEC23AQ15436 765 aa13.99□□□□□ -0.17
CDH3-202ENST00000429102 SND1Q7KZF4 910 aaKnown RBP eCLIP13.99□□□□□ -0.17
CDH3-202ENST00000429102 DNAAF5Q86Y56 855 aa13.99□□□□□ -0.17
CDH3-202ENST00000429102 LRWD1Q9UFC0 647 aa13.99□□□□□ -0.17
CDH3-202ENST00000429102 REXO2Q9Y3B8 237 aaKnown RBP13.99□□□□□ -0.17
CDH3-202ENST00000429102 STK36Q9NRP7 1315 aa13.99□□□□□ -0.17
CDH3-202ENST00000429102 KDM4FA0A1W2PPD8 638 aa13.99□□□□□ -0.17
CDH3-202ENST00000429102 NT5DC1Q5TFE4 455 aa13.99□□□□□ -0.17
CDH3-202ENST00000429102 CDKAL1Q5VV42 579 aa13.99□□□□□ -0.17
CDH3-202ENST00000429102 C2CD5Q86YS7 1000 aa13.99□□□□□ -0.17
CDH3-202ENST00000429102 ANKRD18AQ8IVF6 992 aa13.99□□□□□ -0.17
CDH3-202ENST00000429102 CELF1Q92879 486 aaKnown RBP13.99□□□□□ -0.17
CDH3-202ENST00000429102 FERMT2Q96AC1 680 aa13.99□□□□□ -0.17
CDH3-202ENST00000429102 NLRC4Q9NPP4 1024 aa13.99□□□□□ -0.17
CDH3-202ENST00000429102 MARCH6O60337 910 aa13.98□□□□□ -0.17
CDH3-202ENST00000429102 TXKP42681 527 aa13.98□□□□□ -0.17
CDH3-202ENST00000429102 DIXDC1Q155Q3 683 aa13.98□□□□□ -0.17
CDH3-202ENST00000429102 ERFEQ4G0M1 354 aa13.98□□□□□ -0.17
CDH3-202ENST00000429102 GPATCH11Q8N954 259 aa13.98□□□□□ -0.17
CDH3-202ENST00000429102 ZNF579Q8NAF0 562 aaKnown RBP13.98□□□□□ -0.17
CDH3-202ENST00000429102 NOC4LQ9BVI4 516 aaKnown RBP13.98□□□□□ -0.17
CDH3-202ENST00000429102 SAMM50Q9Y512 469 aa13.98□□□□□ -0.17
CDH3-202ENST00000429102 AKR1B10O60218 316 aa13.98□□□□□ -0.17
CDH3-202ENST00000429102 CCNT1O60563 726 aaKnown RBP13.98□□□□□ -0.17
CDH3-202ENST00000429102 GGCXP38435 758 aa13.98□□□□□ -0.17
CDH3-202ENST00000429102 ATP1A2P50993 1020 aa13.98□□□□□ -0.17
CDH3-202ENST00000429102 ALX1Q15699 326 aa13.98□□□□□ -0.17
CDH3-202ENST00000429102 TDRD12Q587J7 1177 aaKnown RBP13.98□□□□□ -0.17
CDH3-202ENST00000429102 IFT81Q8WYA0 676 aa13.98□□□□□ -0.17
CDH3-202ENST00000429102 CCDC42Q96M95 316 aa13.98□□□□□ -0.17
CDH3-202ENST00000429102 TUBGCP2Q9BSJ2 902 aa13.98□□□□□ -0.17
CDH3-202ENST00000429102 PLA2G12BQ9BX93 195 aa13.98□□□□□ -0.17
CDH3-202ENST00000429102 UBA5Q9GZZ9 404 aa13.98□□□□□ -0.17
CDH3-202ENST00000429102 ESYT3A0FGR9 886 aa13.98□□□□□ -0.17
CDH3-202ENST00000429102 ZEB2O60315 1214 aa13.98□□□□□ -0.17
CDH3-202ENST00000429102 CRKLP46109 303 aaKnown RBP13.98□□□□□ -0.17
CDH3-202ENST00000429102 CCDC181Q5TID7 509 aa13.98□□□□□ -0.17
CDH3-202ENST00000429102 TMTC3Q6ZXV5 915 aa13.98□□□□□ -0.17
CDH3-202ENST00000429102 PRPF3O43395 683 aaKnown RBP13.97□□□□□ -0.17
CDH3-202ENST00000429102 MOCS3O95396 460 aa13.97□□□□□ -0.17
CDH3-202ENST00000429102 DZIP1Q86YF9 867 aaKnown RBP13.97□□□□□ -0.17
CDH3-202ENST00000429102 EXOC4Q96A65 974 aa13.97□□□□□ -0.17
CDH3-202ENST00000429102 SLAIN2Q9P270 581 aa13.97□□□□□ -0.17
CDH3-202ENST00000429102 PDE2AO00408 941 aaPredicted RBP13.97□□□□□ -0.17
CDH3-202ENST00000429102 PSMA7O14818 248 aa13.97□□□□□ -0.17
CDH3-202ENST00000429102 GTPBP6O43824 516 aaPredicted RBP13.97□□□□□ -0.17
CDH3-202ENST00000429102 STIM1Q13586 685 aa13.97□□□□□ -0.17
CDH3-202ENST00000429102 FAM182BQ5T319 152 aa13.97□□□□□ -0.17
CDH3-202ENST00000429102 MB21D1Q8N884 522 aa13.97□□□□□ -0.17
CDH3-202ENST00000429102 GOLGA5Q8TBA6 731 aa13.97□□□□□ -0.17
CDH3-202ENST00000429102 NAA15Q9BXJ9 866 aaKnown RBP13.97□□□□□ -0.17
CDH3-202ENST00000429102 RTL9Q8NET4 1388 aa13.97□□□□□ -0.17
CDH3-202ENST00000429102 CACNB1Q02641 598 aaPredicted RBP13.97□□□□□ -0.17
CDH3-202ENST00000429102 MECOMQ03112 1051 aa13.97□□□□□ -0.17
CDH3-202ENST00000429102 STK4Q13043 487 aa13.97□□□□□ -0.17
CDH3-202ENST00000429102 BLIDQ8IZY5 108 aa13.97□□□□□ -0.17
CDH3-202ENST00000429102 RRP36Q96EU6 259 aaKnown RBP13.97□□□□□ -0.17
CDH3-202ENST00000429102 SPA17Q15506 151 aa13.96□□□□□ -0.17
CDH3-202ENST00000429102 ZNF658Q5TYW1 1059 aaPredicted RBP13.96□□□□□ -0.17
CDH3-202ENST00000429102 MAPKAPK5Q8IW41 473 aa13.96□□□□□ -0.17
CDH3-202ENST00000429102 MICALL1Q8N3F8 863 aa13.96□□□□□ -0.17
CDH3-202ENST00000429102 NHEJ1Q9H9Q4 299 aaPredicted RBP13.96□□□□□ -0.17
CDH3-202ENST00000429102 BIN2Q9UBW5 565 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms