RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 MAP4K1Q92918 833 aa12.67□□□□□ -0.38
ATG4B-210ENST00000428861 ESYT1Q9BSJ8 1104 aa12.67□□□□□ -0.38
ATG4B-210ENST00000428861 TMEM106CQ9BVX2 250 aa12.67□□□□□ -0.38
ATG4B-210ENST00000428861 RNF208Q9H0X6 261 aa12.67□□□□□ -0.38
ATG4B-210ENST00000428861 SLC38A10Q9HBR0 1119 aa12.67□□□□□ -0.38
ATG4B-210ENST00000428861 RAVER2Q9HCJ3 691 aaKnown RBP12.67□□□□□ -0.38
ATG4B-210ENST00000428861 FEM1BQ9UK73 627 aa12.67□□□□□ -0.38
ATG4B-210ENST00000428861 RBBP6Q7Z6E9 1792 aaKnown RBP12.66□□□□□ -0.38
ATG4B-210ENST00000428861 ZNF536O15090 1300 aa12.66□□□□□ -0.38
ATG4B-210ENST00000428861 FRMPD2Q68DX3 1309 aaPredicted RBP12.66□□□□□ -0.38
ATG4B-210ENST00000428861 HOXC6P09630 235 aa12.66□□□□□ -0.38
ATG4B-210ENST00000428861 MAP3K21Q5TCX8 1036 aa12.66□□□□□ -0.38
ATG4B-210ENST00000428861 CPXCR1Q8N123 301 aa12.66□□□□□ -0.38
ATG4B-210ENST00000428861 APBA2Q99767 749 aa12.66□□□□□ -0.38
ATG4B-210ENST00000428861 MROH8Q9H579 483 aa12.66□□□□□ -0.38
ATG4B-210ENST00000428861 CWC22Q9HCG8 908 aaKnown RBP12.66□□□□□ -0.38
ATG4B-210ENST00000428861 PAK6Q9NQU5 681 aaPredicted RBP12.66□□□□□ -0.38
ATG4B-210ENST00000428861 RBM8AQ9Y5S9 174 aaKnown RBP12.66□□□□□ -0.38
ATG4B-210ENST00000428861 ATP2A1O14983 1001 aa12.65□□□□□ -0.38
ATG4B-210ENST00000428861 PGK2P07205 417 aa12.65□□□□□ -0.38
ATG4B-210ENST00000428861 GJB1P08034 283 aa12.65□□□□□ -0.38
ATG4B-210ENST00000428861 SNHG28P0DPA3 235 aa12.65□□□□□ -0.38
ATG4B-210ENST00000428861 PDHBP11177 359 aa12.65□□□□□ -0.38
ATG4B-210ENST00000428861 ZKSCAN1P17029 563 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-210ENST00000428861 SLC16A2P36021 539 aa12.65□□□□□ -0.38
ATG4B-210ENST00000428861 STAT2P52630 851 aa12.65□□□□□ -0.38
ATG4B-210ENST00000428861 CACNB2Q08289 660 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-210ENST00000428861 PPP4R3BQ5MIZ7 849 aa12.65□□□□□ -0.38
ATG4B-210ENST00000428861 SNRNP48Q6IEG0 339 aaKnown RBP12.65□□□□□ -0.38
ATG4B-210ENST00000428861 ENAHQ8N8S7 591 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-210ENST00000428861 DCAF4Q8WV16 495 aa12.65□□□□□ -0.38
ATG4B-210ENST00000428861 ANKS1AQ92625 1134 aa12.65□□□□□ -0.38
ATG4B-210ENST00000428861 TTC14Q96N46 770 aa12.65□□□□□ -0.38
ATG4B-210ENST00000428861 ZSCAN10Q96SZ4 725 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-210ENST00000428861 PRR12Q9ULL5 1215 aa12.65□□□□□ -0.38
ATG4B-210ENST00000428861 ISY1Q9ULR0 285 aaKnown RBP12.65□□□□□ -0.38
ATG4B-210ENST00000428861 IVNS1ABPQ9Y6Y0 642 aa12.65□□□□□ -0.38
ATG4B-210ENST00000428861 U3KPZ7 1027 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-210ENST00000428861 E7EWF7 191 aa12.64□□□□□ -0.39
ATG4B-210ENST00000428861 STRNO43815 780 aa12.64□□□□□ -0.39
ATG4B-210ENST00000428861 PLA2G6O60733 806 aa12.64□□□□□ -0.39
ATG4B-210ENST00000428861 ZBED4O75132 1171 aa12.64□□□□□ -0.39
ATG4B-210ENST00000428861 SLC25A27O95847 323 aa12.64□□□□□ -0.39
ATG4B-210ENST00000428861 PRKAR2AP13861 404 aaKnown RBP12.64□□□□□ -0.39
ATG4B-210ENST00000428861 CCND3P30281 292 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-210ENST00000428861 GJA8P48165 433 aa12.64□□□□□ -0.39
ATG4B-210ENST00000428861 SLC4A3P48751 1232 aa12.64□□□□□ -0.39
ATG4B-210ENST00000428861 CCDC96Q2M329 555 aa12.64□□□□□ -0.39
ATG4B-210ENST00000428861 FAM160B2Q86V87 743 aa12.64□□□□□ -0.39
ATG4B-210ENST00000428861 DGKHQ86XP1 1220 aa12.64□□□□□ -0.39
ATG4B-210ENST00000428861 TRPV1Q8NER1 839 aa12.64□□□□□ -0.39
ATG4B-210ENST00000428861 U2AF1L4Q8WU68 220 aaKnown RBP12.64□□□□□ -0.39
ATG4B-210ENST00000428861 AGBL1Q96MI9 1066 aa12.64□□□□□ -0.39
ATG4B-210ENST00000428861 DEFB118Q96PH6 123 aa12.64□□□□□ -0.39
ATG4B-210ENST00000428861 MMP19Q99542 508 aa12.64□□□□□ -0.39
ATG4B-210ENST00000428861 TEX13BQ9BXU2 312 aa12.64□□□□□ -0.39
ATG4B-210ENST00000428861 KRT23Q9C075 422 aa12.64□□□□□ -0.39
ATG4B-210ENST00000428861 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.64□□□□□ -0.395e-6■□□□□ 8.4
ATG4B-210ENST00000428861 CPVLQ9H3G5 476 aa12.64□□□□□ -0.39
ATG4B-210ENST00000428861 SENP2Q9HC62 589 aa12.64□□□□□ -0.39
ATG4B-210ENST00000428861 GPCPD1Q9NPB8 672 aa12.64□□□□□ -0.39
ATG4B-210ENST00000428861 TNKSO95271 1327 aa12.63□□□□□ -0.39
ATG4B-210ENST00000428861 RPTORQ8N122 1335 aa12.63□□□□□ -0.39
ATG4B-210ENST00000428861 SGPL1O95470 568 aa12.63□□□□□ -0.39
ATG4B-210ENST00000428861 CENPBP07199 599 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-210ENST00000428861 GOLGA8HP0CJ92 632 aa12.63□□□□□ -0.39
ATG4B-210ENST00000428861 CYP2C19P33261 490 aa12.63□□□□□ -0.39
ATG4B-210ENST00000428861 ANTXR2P58335 489 aa12.63□□□□□ -0.39
ATG4B-210ENST00000428861 ZNF543Q08ER8 600 aa12.63□□□□□ -0.39
ATG4B-210ENST00000428861 SEC23AQ15436 765 aa12.63□□□□□ -0.39
ATG4B-210ENST00000428861 CCDC174Q6PII3 467 aa12.63□□□□□ -0.39
ATG4B-210ENST00000428861 BTNL9Q6UXG8 535 aa12.63□□□□□ -0.39
ATG4B-210ENST00000428861 CHST3Q7LGC8 479 aa12.63□□□□□ -0.39
ATG4B-210ENST00000428861 UBE2Q1Q7Z7E8 422 aa12.63□□□□□ -0.39
ATG4B-210ENST00000428861 DPP9Q86TI2 863 aa12.63□□□□□ -0.39
ATG4B-210ENST00000428861 ABRAQ8N0Z2 381 aa12.63□□□□□ -0.39
ATG4B-210ENST00000428861 CHURC1Q8WUH1 139 aa12.63□□□□□ -0.39
ATG4B-210ENST00000428861 PPP4R2Q9NY27 417 aa12.63□□□□□ -0.39
ATG4B-210ENST00000428861 ZNF236Q9UL36 1845 aa12.62□□□□□ -0.39
ATG4B-210ENST00000428861 SLC27A2O14975 620 aa12.62□□□□□ -0.39
ATG4B-210ENST00000428861 FCER1AP12319 257 aa12.62□□□□□ -0.39
ATG4B-210ENST00000428861 MNX1P50219 401 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-210ENST00000428861 OAZ1P54368 228 aa12.62□□□□□ -0.39
ATG4B-210ENST00000428861 IKQ13123 557 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-210ENST00000428861 NECTIN1Q15223 517 aa12.62□□□□□ -0.39
ATG4B-210ENST00000428861 ZNF792Q3KQV3 632 aa12.62□□□□□ -0.39
ATG4B-210ENST00000428861 SYDE2Q5VT97 1194 aa12.62□□□□□ -0.39
ATG4B-210ENST00000428861 IQCA1Q86XH1 822 aa12.62□□□□□ -0.39
ATG4B-210ENST00000428861 MB21D2Q8IYB1 491 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-210ENST00000428861 TRMT44Q8IYL2 757 aaKnown RBP12.62□□□□□ -0.39
ATG4B-210ENST00000428861 PNMA1Q8ND90 353 aa12.62□□□□□ -0.39
ATG4B-210ENST00000428861 MAML3Q96JK9 1138 aa12.62□□□□□ -0.39
ATG4B-210ENST00000428861 CRISPLD2Q9H0B8 497 aa12.62□□□□□ -0.39
ATG4B-210ENST00000428861 RANBP17Q9H2T7 1088 aaKnown RBP12.62□□□□□ -0.39
ATG4B-210ENST00000428861 CNNM2Q9H8M5 875 aa12.62□□□□□ -0.39
ATG4B-210ENST00000428861 HMX1Q9NP08 348 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-210ENST00000428861 ANO2Q9NQ90 1003 aa12.62□□□□□ -0.39
ATG4B-210ENST00000428861 CDC45O75419 566 aa12.61□□□□□ -0.39
ATG4B-210ENST00000428861 NT5C2P49902 561 aa12.61□□□□□ -0.39
ATG4B-210ENST00000428861 PRAMEF19Q5SWL8 479 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms