RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 NDUFB10O96000 172 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 SNHG28P0DPA3 235 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 TOP1P11387 765 aaKnown RBP10.79□□□□□ -0.68
SMC1A-203ENST00000428014 PTPREP23469 700 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 GJA8P48165 433 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 MAP2K5Q13163 448 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 PWP2Q15269 919 aaKnown RBP10.79□□□□□ -0.68
SMC1A-203ENST00000428014 Q3C1V9 767 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 OLFML2BQ68BL8 750 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 BTNL9Q6UXG8 535 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 CCDC129Q6ZRS4 1044 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 IQCA1Q86XH1 822 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 CCAR1Q8IX12 1150 aaKnown RBP10.79□□□□□ -0.68
SMC1A-203ENST00000428014 DCAF4Q8WV16 495 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 BBXQ8WY36 941 aaPredicted RBP10.79□□□□□ -0.68
SMC1A-203ENST00000428014 SLF1Q9BQI6 1058 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 TEX13BQ9BXU2 312 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 KRT23Q9C075 422 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 CLIP2Q9UDT6 1046 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 FBXO40Q9UH90 709 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 ZNF214Q9UL59 606 aaPredicted RBP10.79□□□□□ -0.68
SMC1A-203ENST00000428014 STK24Q9Y6E0 443 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 RPTORQ8N122 1335 aa10.79□□□□□ -0.68
SMC1A-203ENST00000428014 BMP3P12645 472 aa10.78□□□□□ -0.68
SMC1A-203ENST00000428014 TKFCQ3LXA3 575 aa10.78□□□□□ -0.68
SMC1A-203ENST00000428014 KIAA1755Q5JYT7 1200 aa10.78□□□□□ -0.68
SMC1A-203ENST00000428014 GPATCH4Q5T3I0 446 aaKnown RBP10.78□□□□□ -0.68
SMC1A-203ENST00000428014 CHST13Q8NET6 341 aa10.78□□□□□ -0.68
SMC1A-203ENST00000428014 MAP4K1Q92918 833 aa10.78□□□□□ -0.68
SMC1A-203ENST00000428014 MOV10L1Q9BXT6 1211 aaKnown RBP10.78□□□□□ -0.68
SMC1A-203ENST00000428014 SLC38A10Q9HBR0 1119 aa10.78□□□□□ -0.68
SMC1A-203ENST00000428014 IL17RBQ9NRM6 502 aa10.78□□□□□ -0.68
SMC1A-203ENST00000428014 BTBD7Q9P203 1132 aa10.78□□□□□ -0.68
SMC1A-203ENST00000428014 PLXNB2O15031 1838 aa10.78□□□□□ -0.68
SMC1A-203ENST00000428014 CENPFP49454 3210 aa10.78□□□□□ -0.68
SMC1A-203ENST00000428014 PRDM1O75626 825 aa10.77□□□□□ -0.69
SMC1A-203ENST00000428014 STAT3P40763 770 aa10.77□□□□□ -0.69
SMC1A-203ENST00000428014 SLC1A4P43007 532 aa10.77□□□□□ -0.69
SMC1A-203ENST00000428014 CLCN6P51797 869 aa10.77□□□□□ -0.69
SMC1A-203ENST00000428014 STAT2P52630 851 aa10.77□□□□□ -0.69
SMC1A-203ENST00000428014 ZYXQ15942 572 aaKnown RBP10.77□□□□□ -0.69
SMC1A-203ENST00000428014 UBE2Q1Q7Z7E8 422 aa10.77□□□□□ -0.69
SMC1A-203ENST00000428014 CRISPLD2Q9H0B8 497 aa10.77□□□□□ -0.69
SMC1A-203ENST00000428014 PORCNQ9H237 461 aa10.77□□□□□ -0.69
SMC1A-203ENST00000428014 GABRQQ9UN88 632 aa10.77□□□□□ -0.69
SMC1A-203ENST00000428014 RANBP6O60518 1105 aaKnown RBP10.76□□□□□ -0.69
SMC1A-203ENST00000428014 ZBED4O75132 1171 aa10.76□□□□□ -0.69
SMC1A-203ENST00000428014 SGPL1O95470 568 aa10.76□□□□□ -0.69
SMC1A-203ENST00000428014 NEFLP07196 543 aa10.76□□□□□ -0.69
SMC1A-203ENST00000428014 FCER1AP12319 257 aa10.76□□□□□ -0.69
SMC1A-203ENST00000428014 CTDSPL2Q05D32 466 aa10.76□□□□□ -0.69
SMC1A-203ENST00000428014 TMEM132BQ14DG7 1078 aa10.76□□□□□ -0.69
SMC1A-203ENST00000428014 FAM83BQ5T0W9 1011 aa10.76□□□□□ -0.69
SMC1A-203ENST00000428014 SLFN13Q68D06 897 aa10.76□□□□□ -0.69
SMC1A-203ENST00000428014 ATG4CQ96DT6 458 aa10.76□□□□□ -0.69
SMC1A-203ENST00000428014 PAGR1Q9BTK6 254 aa10.76□□□□□ -0.69
SMC1A-203ENST00000428014 NBPF3Q9H094 633 aa10.76□□□□□ -0.69
SMC1A-203ENST00000428014 HMX1Q9NP08 348 aaPredicted RBP10.76□□□□□ -0.69
SMC1A-203ENST00000428014 STX8Q9UNK0 236 aa10.76□□□□□ -0.69
SMC1A-203ENST00000428014 ZSWIM8A7E2V4 1837 aa10.76□□□□□ -0.69
SMC1A-203ENST00000428014 GABBR2O75899 941 aa10.75□□□□□ -0.69
SMC1A-203ENST00000428014 INHAP05111 366 aa10.75□□□□□ -0.69
SMC1A-203ENST00000428014 CCL5P13501 91 aa10.75□□□□□ -0.69
SMC1A-203ENST00000428014 ZKSCAN1P17029 563 aaPredicted RBP10.75□□□□□ -0.69
SMC1A-203ENST00000428014 ERCC3P19447 782 aa10.75□□□□□ -0.69
SMC1A-203ENST00000428014 TRDNQ13061 729 aa10.75□□□□□ -0.69
SMC1A-203ENST00000428014 TSGA10IPQ3SY00 556 aa10.75□□□□□ -0.69
SMC1A-203ENST00000428014 MFSD14CQ5VZR4 134 aa10.75□□□□□ -0.69
SMC1A-203ENST00000428014 CLEC10AQ8IUN9 316 aa10.75□□□□□ -0.69
SMC1A-203ENST00000428014 TEX2Q8IWB9 1127 aa10.75□□□□□ -0.69
SMC1A-203ENST00000428014 SPICE1Q8N0Z3 855 aa10.75□□□□□ -0.69
SMC1A-203ENST00000428014 MAP3K14Q99558 947 aa10.75□□□□□ -0.69
SMC1A-203ENST00000428014 WDR19Q8NEZ3 1342 aa10.75□□□□□ -0.69
SMC1A-203ENST00000428014 DNAJC25-GNG10A0A024R161 153 aa10.74□□□□□ -0.69
SMC1A-203ENST00000428014 IRX6P78412 446 aaPredicted RBP10.74□□□□□ -0.69
SMC1A-203ENST00000428014 ATP2B2Q01814 1243 aa10.74□□□□□ -0.69
SMC1A-203ENST00000428014 TRAF1Q13077 416 aa10.74□□□□□ -0.69
SMC1A-203ENST00000428014 KCTD2Q14681 263 aa10.74□□□□□ -0.69
SMC1A-203ENST00000428014 FAM47AQ5JRC9 791 aa10.74□□□□□ -0.69
SMC1A-203ENST00000428014 CASC1Q6TDU7 716 aa10.74□□□□□ -0.69
SMC1A-203ENST00000428014 MAMDC4Q6UXC1 1216 aa10.74□□□□□ -0.69
SMC1A-203ENST00000428014 KIAA1211Q6ZU35 1233 aa10.74□□□□□ -0.69
SMC1A-203ENST00000428014 TBC1D10CQ8IV04 446 aa10.74□□□□□ -0.69
SMC1A-203ENST00000428014 SAMD3Q8N6K7 520 aa10.74□□□□□ -0.69
SMC1A-203ENST00000428014 SH3TC2Q8TF17 1288 aa10.74□□□□□ -0.69
SMC1A-203ENST00000428014 TRIB2Q92519 343 aa10.74□□□□□ -0.69
SMC1A-203ENST00000428014 CCDC136Q96JN2 1154 aa10.74□□□□□ -0.69
SMC1A-203ENST00000428014 TMEM47Q9BQJ4 181 aa10.74□□□□□ -0.69
SMC1A-203ENST00000428014 RNF208Q9H0X6 261 aa10.74□□□□□ -0.69
SMC1A-203ENST00000428014 OGDHLQ9ULD0 1010 aa10.74□□□□□ -0.69
SMC1A-203ENST00000428014 TACC3Q9Y6A5 838 aa10.74□□□□□ -0.69
SMC1A-203ENST00000428014 EIF5BO60841 1220 aaKnown RBP10.73□□□□□ -0.69
SMC1A-203ENST00000428014 PDHBP11177 359 aa10.73□□□□□ -0.69
SMC1A-203ENST00000428014 ADORA2AP29274 412 aa10.73□□□□□ -0.69
SMC1A-203ENST00000428014 ZNF543Q08ER8 600 aa10.73□□□□□ -0.69
SMC1A-203ENST00000428014 SART3Q15020 963 aaKnown RBP10.73□□□□□ -0.69
SMC1A-203ENST00000428014 ASPRV1Q53RT3 343 aa10.73□□□□□ -0.69
SMC1A-203ENST00000428014 TMTC2Q8N394 836 aa10.73□□□□□ -0.69
SMC1A-203ENST00000428014 RGS22Q8NE09 1264 aa10.73□□□□□ -0.69
SMC1A-203ENST00000428014 U2AF1L4Q8WU68 220 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms