RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 PDLIM7Q9NR12 457 aa15.38■□□□□ 0.05
NELFE-203ENST00000426722 TTC41PQ6P2S7 1318 aa15.38■□□□□ 0.05
NELFE-203ENST00000426722 ERC2O15083 957 aa15.37■□□□□ 0.05
NELFE-203ENST00000426722 NDUFB10O96000 172 aa15.37■□□□□ 0.05
NELFE-203ENST00000426722 TDO2P48775 406 aa15.37■□□□□ 0.05
NELFE-203ENST00000426722 OAZ1P54368 228 aa15.37■□□□□ 0.05
NELFE-203ENST00000426722 ZNF697Q5TEC3 545 aa15.37■□□□□ 0.05
NELFE-203ENST00000426722 SNRNP48Q6IEG0 339 aaKnown RBP15.37■□□□□ 0.05
NELFE-203ENST00000426722 FERMT2Q96AC1 680 aa15.37■□□□□ 0.05
NELFE-203ENST00000426722 NACAP1Q9BZK3 213 aa15.37■□□□□ 0.05
NELFE-203ENST00000426722 CLIP2Q9UDT6 1046 aa15.37■□□□□ 0.05
NELFE-203ENST00000426722 FBXO40Q9UH90 709 aa15.37■□□□□ 0.05
NELFE-203ENST00000426722 FEM1BQ9UK73 627 aa15.37■□□□□ 0.05
NELFE-203ENST00000426722 FAM184BQ9ULE4 1060 aa15.37■□□□□ 0.05
NELFE-203ENST00000426722 DNAJC25-GNG10A0A024R161 153 aa15.36■□□□□ 0.05
NELFE-203ENST00000426722 MOXD2PA6NHM9 499 aa15.36■□□□□ 0.05
NELFE-203ENST00000426722 TTLL1O95922 423 aa15.36■□□□□ 0.05
NELFE-203ENST00000426722 APPP05067 770 aa15.36■□□□□ 0.05
NELFE-203ENST00000426722 SLC3A2P08195 630 aaKnown RBP15.36■□□□□ 0.05
NELFE-203ENST00000426722 TLE2Q04725 743 aa15.36■□□□□ 0.05
NELFE-203ENST00000426722 PDE4BQ07343 736 aa15.36■□□□□ 0.05
NELFE-203ENST00000426722 PPP4R3BQ5MIZ7 849 aa15.36■□□□□ 0.05
NELFE-203ENST00000426722 IFNL3Q8IZI9 196 aa15.36■□□□□ 0.05
NELFE-203ENST00000426722 GMCL1P1Q8NEA9 526 aa15.36■□□□□ 0.05
NELFE-203ENST00000426722 CHST13Q8NET6 341 aa15.36■□□□□ 0.05
NELFE-203ENST00000426722 NUP133Q8WUM0 1156 aa15.36■□□□□ 0.05
NELFE-203ENST00000426722 BADQ92934 168 aa15.36■□□□□ 0.05
NELFE-203ENST00000426722 TOX2Q96NM4 488 aa15.36■□□□□ 0.05
NELFE-203ENST00000426722 MTMR4Q9NYA4 1195 aa15.36■□□□□ 0.05
NELFE-203ENST00000426722 ADAMTS4O75173 837 aa15.35■□□□□ 0.05
NELFE-203ENST00000426722 PGK1P00558 417 aa15.35■□□□□ 0.05
NELFE-203ENST00000426722 CLTBP09497 229 aa15.35■□□□□ 0.05
NELFE-203ENST00000426722 TAL1P17542 331 aaPredicted RBP15.35■□□□□ 0.05
NELFE-203ENST00000426722 SHHQ15465 462 aa15.35■□□□□ 0.05
NELFE-203ENST00000426722 STK11IPQ8N1F8 1099 aa15.35■□□□□ 0.05
NELFE-203ENST00000426722 NEDD1Q8NHV4 660 aa15.35■□□□□ 0.05
NELFE-203ENST00000426722 NUP88Q99567 741 aaPredicted RBP15.35■□□□□ 0.05
NELFE-203ENST00000426722 SLC38A10Q9HBR0 1119 aa15.35■□□□□ 0.05
NELFE-203ENST00000426722 EPB41L4AQ9HCS5 686 aaPredicted RBP15.35■□□□□ 0.05
NELFE-203ENST00000426722 RIPK3Q9Y572 518 aa15.35■□□□□ 0.05
NELFE-203ENST00000426722 PLIN4Q96Q06 1357 aa15.35■□□□□ 0.05
NELFE-203ENST00000426722 LAMA3Q16787 3333 aa15.34■□□□□ 0.05
NELFE-203ENST00000426722 A0A1W2PQ45 241 aaPredicted RBP15.34■□□□□ 0.05
NELFE-203ENST00000426722 A0A1W2PQY0 241 aa15.34■□□□□ 0.05
NELFE-203ENST00000426722 TRIM43BA6NCK2 446 aa15.34■□□□□ 0.05
NELFE-203ENST00000426722 M0R2C6 588 aa15.34■□□□□ 0.05
NELFE-203ENST00000426722 KIAA0355O15063 1070 aa15.34■□□□□ 0.05
NELFE-203ENST00000426722 DUSP11O75319 330 aaKnown RBP15.34■□□□□ 0.05
NELFE-203ENST00000426722 SNAI1O95863 264 aaPredicted RBP15.34■□□□□ 0.05
NELFE-203ENST00000426722 TSPY3P0CV98 308 aa15.34■□□□□ 0.05
NELFE-203ENST00000426722 TSPY8P0CW00 308 aa15.34■□□□□ 0.05
NELFE-203ENST00000426722 SMAD3P84022 425 aaKnown RBP15.34■□□□□ 0.05
NELFE-203ENST00000426722 SH3RF1Q7Z6J0 888 aa15.34■□□□□ 0.05
NELFE-203ENST00000426722 CPXCR1Q8N123 301 aa15.34■□□□□ 0.05
NELFE-203ENST00000426722 KLHDC9Q8NEP7 349 aa15.34■□□□□ 0.05
NELFE-203ENST00000426722 KIFC2Q96AC6 838 aa15.34■□□□□ 0.05
NELFE-203ENST00000426722 TRIM43Q96BQ3 446 aaPredicted RBP15.34■□□□□ 0.05
NELFE-203ENST00000426722 CEP95Q96GE4 821 aa15.34■□□□□ 0.05
NELFE-203ENST00000426722 ABHD16BQ9H3Z7 469 aa15.34■□□□□ 0.05
NELFE-203ENST00000426722 STARD7Q9NQZ5 370 aa15.34■□□□□ 0.05
NELFE-203ENST00000426722 BMP3P12645 472 aa15.33■□□□□ 0.04
NELFE-203ENST00000426722 RAG1P15918 1043 aa15.33■□□□□ 0.04
NELFE-203ENST00000426722 CST5P28325 142 aaPredicted RBP15.33■□□□□ 0.04
NELFE-203ENST00000426722 C9orf50Q5SZB4 431 aa15.33■□□□□ 0.04
NELFE-203ENST00000426722 SLFN13Q68D06 897 aa15.33■□□□□ 0.04
NELFE-203ENST00000426722 ANKRD33Q7Z3H0 272 aa15.33■□□□□ 0.04
NELFE-203ENST00000426722 FAM160B2Q86V87 743 aa15.33■□□□□ 0.04
NELFE-203ENST00000426722 ANKRD35Q8N283 1001 aa15.33■□□□□ 0.04
NELFE-203ENST00000426722 PCSK9Q8NBP7 692 aaKnown RBP15.33■□□□□ 0.04
NELFE-203ENST00000426722 CHURC1Q8WUH1 139 aa15.33■□□□□ 0.04
NELFE-203ENST00000426722 GUCD1Q96NT3 240 aa15.33■□□□□ 0.04
NELFE-203ENST00000426722 NAPBQ9H115 298 aa15.33■□□□□ 0.04
NELFE-203ENST00000426722 SPC25Q9HBM1 224 aa15.33■□□□□ 0.04
NELFE-203ENST00000426722 MROH7Q68CQ1 1323 aa15.33■□□□□ 0.04
NELFE-203ENST00000426722 TMEM265A0A087WTH1 108 aa15.32■□□□□ 0.04
NELFE-203ENST00000426722 DCDC2CA8MYV0 355 aa15.32■□□□□ 0.04
NELFE-203ENST00000426722 PLA2G6O60733 806 aa15.32■□□□□ 0.04
NELFE-203ENST00000426722 PRDM1O75626 825 aa15.32■□□□□ 0.04
NELFE-203ENST00000426722 ACLYP53396 1101 aa15.32■□□□□ 0.04
NELFE-203ENST00000426722 ACVR2BQ13705 512 aa15.32■□□□□ 0.04
NELFE-203ENST00000426722 ZMYM1Q5SVZ6 1142 aa15.32■□□□□ 0.04
NELFE-203ENST00000426722 RAVER2Q9HCJ3 691 aaKnown RBP15.32■□□□□ 0.04
NELFE-203ENST00000426722 TMEM39AQ9NV64 488 aa15.32■□□□□ 0.04
NELFE-203ENST00000426722 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.32■□□□□ 0.04
NELFE-203ENST00000426722 ZHX1Q9UKY1 873 aaPredicted RBP15.32■□□□□ 0.04
NELFE-203ENST00000426722 ELP1O95163 1332 aa15.32■□□□□ 0.04
NELFE-203ENST00000426722 SYNRGQ9UMZ2 1314 aa15.32■□□□□ 0.04
NELFE-203ENST00000426722 MCM3APO60318 1980 aa15.31■□□□□ 0.04
NELFE-203ENST00000426722 SLC4A3P48751 1232 aa15.31■□□□□ 0.04
NELFE-203ENST00000426722 STAT2P52630 851 aa15.31■□□□□ 0.04
NELFE-203ENST00000426722 TFAP4Q01664 338 aa15.31■□□□□ 0.04
NELFE-203ENST00000426722 PPARAQ07869 468 aa15.31■□□□□ 0.04
NELFE-203ENST00000426722 TKFCQ3LXA3 575 aa15.31■□□□□ 0.04
NELFE-203ENST00000426722 TSHZ3Q63HK5 1081 aa15.31■□□□□ 0.04
NELFE-203ENST00000426722 CCSAPQ6IQ19 270 aaPredicted RBP15.31■□□□□ 0.04
NELFE-203ENST00000426722 PI4K2BQ8TCG2 481 aa15.31■□□□□ 0.04
NELFE-203ENST00000426722 GMCL1Q96IK5 515 aa15.31■□□□□ 0.04
NELFE-203ENST00000426722 GLT1D1Q96MS3 346 aa15.31■□□□□ 0.04
NELFE-203ENST00000426722 FSD1Q9BTV5 496 aa15.31■□□□□ 0.04
NELFE-203ENST00000426722 SEMA6BQ9H3T3 888 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms