RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 HERC5Q9UII4 1024 aaKnown RBP30.32■■■□□ 2.44
LDB1-202ENST00000425280 RRP1BQ14684 758 aaKnown RBP30.32■■■□□ 2.44
LDB1-202ENST00000425280 GPATCH4Q5T3I0 446 aaKnown RBP30.32■■■□□ 2.44
LDB1-202ENST00000425280 FKBP1CQ5VVH2 108 aa30.32■■■□□ 2.44
LDB1-202ENST00000425280 ERCC4Q92889 916 aaPredicted RBP30.32■■■□□ 2.44
LDB1-202ENST00000425280 VEZTQ9HBM0 779 aa30.32■■■□□ 2.44
LDB1-202ENST00000425280 KCNH3Q9ULD8 1083 aa30.32■■■□□ 2.44
LDB1-202ENST00000425280 JAG1P78504 1218 aa30.31■■■□□ 2.44
LDB1-202ENST00000425280 ICA1Q05084 483 aa30.31■■■□□ 2.44
LDB1-202ENST00000425280 TNIP1Q15025 636 aa30.31■■■□□ 2.44
LDB1-202ENST00000425280 LTBP3Q9NS15 1303 aa30.31■■■□□ 2.44
LDB1-202ENST00000425280 CCDC96Q2M329 555 aa30.31■■■□□ 2.44
LDB1-202ENST00000425280 TTBK2Q6IQ55 1244 aa30.31■■■□□ 2.44
LDB1-202ENST00000425280 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.31■■■□□ 2.44
LDB1-202ENST00000425280 RBM26Q5T8P6 1007 aaKnown RBP30.3■■■□□ 2.44
LDB1-202ENST00000425280 DNAJC25Q9H1X3 360 aa30.3■■■□□ 2.44
LDB1-202ENST00000425280 SHTN1A0MZ66 631 aa30.29■■■□□ 2.44
LDB1-202ENST00000425280 STX1AQ16623 288 aa30.29■■■□□ 2.44
LDB1-202ENST00000425280 KCTD1Q719H9 257 aa30.29■■■□□ 2.44
LDB1-202ENST00000425280 ADGRF4Q8IZF3 695 aa30.29■■■□□ 2.44
LDB1-202ENST00000425280 CSRNP2Q9H175 543 aa30.29■■■□□ 2.44
LDB1-202ENST00000425280 JMJD4Q9H9V9 463 aa30.29■■■□□ 2.44
LDB1-202ENST00000425280 FAM13BQ9NYF5 915 aa30.29■■■□□ 2.44
LDB1-202ENST00000425280 KIAA1468Q9P260 1216 aa30.29■■■□□ 2.44
LDB1-202ENST00000425280 CCDC194A0A1B0GVG4 234 aa30.29■■■□□ 2.44
LDB1-202ENST00000425280 SMCO2A6NFE2 343 aa30.29■■■□□ 2.44
LDB1-202ENST00000425280 hCG_1984214I3L0E3 225 aa30.29■■■□□ 2.44
LDB1-202ENST00000425280 GH2P01242 217 aa30.29■■■□□ 2.44
LDB1-202ENST00000425280 ATP2C1P98194 919 aaPredicted RBP30.29■■■□□ 2.44
LDB1-202ENST00000425280 RASSF7Q02833 373 aa30.29■■■□□ 2.44
LDB1-202ENST00000425280 ZNF713Q8N859 430 aaPredicted RBP30.29■■■□□ 2.44
LDB1-202ENST00000425280 CBX8Q9HC52 389 aa30.29■■■□□ 2.44
LDB1-202ENST00000425280 PTGDRQ13258 359 aa30.28■■■□□ 2.44
LDB1-202ENST00000425280 C6orf50Q9HD87 102 aa30.28■■■□□ 2.44
LDB1-202ENST00000425280 MYOZ2Q9NPC6 264 aa30.28■■■□□ 2.44
LDB1-202ENST00000425280 WNT10BO00744 389 aa30.27■■■□□ 2.44
LDB1-202ENST00000425280 NBPF9Q3BBW0 867 aa30.27■■■□□ 2.44
LDB1-202ENST00000425280 NLGN2Q8NFZ4 835 aa30.27■■■□□ 2.44
LDB1-202ENST00000425280 DCAF4Q8WV16 495 aa30.27■■■□□ 2.44
LDB1-202ENST00000425280 FERMT2Q96AC1 680 aa30.27■■■□□ 2.44
LDB1-202ENST00000425280 MYO1BO43795 1136 aa30.27■■■□□ 2.44
LDB1-202ENST00000425280 SLFN13Q68D06 897 aa30.27■■■□□ 2.44
LDB1-202ENST00000425280 USP25Q9UHP3 1055 aa30.27■■■□□ 2.44
LDB1-202ENST00000425280 ESYT2A0FGR8 921 aa30.26■■■□□ 2.43
LDB1-202ENST00000425280 CAVIN2O95810 425 aa30.26■■■□□ 2.43
LDB1-202ENST00000425280 GNA11P29992 359 aa30.26■■■□□ 2.43
LDB1-202ENST00000425280 MCM7P33993 719 aa30.26■■■□□ 2.43
LDB1-202ENST00000425280 SLC16A2P36021 539 aa30.26■■■□□ 2.43
LDB1-202ENST00000425280 PRELPP51888 382 aa30.26■■■□□ 2.43
LDB1-202ENST00000425280 FAM83AQ86UY5 434 aa30.26■■■□□ 2.43
LDB1-202ENST00000425280 LUZP1Q86V48 1076 aa30.26■■■□□ 2.43
LDB1-202ENST00000425280 TMEM39BQ9GZU3 492 aa30.26■■■□□ 2.43
LDB1-202ENST00000425280 LONRF3Q496Y0 759 aa30.26■■■□□ 2.43
LDB1-202ENST00000425280 A0A087WWV3 80 aa30.25■■■□□ 2.43
LDB1-202ENST00000425280 PNMA6FA0A0J9YX94 578 aa30.25■■■□□ 2.43
LDB1-202ENST00000425280 ZNF165P49910 485 aa30.25■■■□□ 2.43
LDB1-202ENST00000425280 KRBA2Q6ZNG9 492 aa30.25■■■□□ 2.43
LDB1-202ENST00000425280 C11orf57Q6ZUT1 292 aaPredicted RBP30.25■■■□□ 2.43
LDB1-202ENST00000425280 USP49Q70CQ1 688 aa30.25■■■□□ 2.43
LDB1-202ENST00000425280 ARFGEF1Q9Y6D6 1849 aa30.25■■■□□ 2.43
LDB1-202ENST00000425280 RAD21O60216 631 aa30.24■■■□□ 2.43
LDB1-202ENST00000425280 RPS12P25398 132 aaKnown RBP30.24■■■□□ 2.43
LDB1-202ENST00000425280 SLC1A4P43007 532 aa30.24■■■□□ 2.43
LDB1-202ENST00000425280 ZNF280AP59817 542 aaPredicted RBP30.24■■■□□ 2.43
LDB1-202ENST00000425280 CDAN1Q8IWY9 1227 aa30.24■■■□□ 2.43
LDB1-202ENST00000425280 COA7Q96BR5 231 aa30.24■■■□□ 2.43
LDB1-202ENST00000425280 MTMR8Q96EF0 704 aa30.24■■■□□ 2.43
LDB1-202ENST00000425280 ANO10Q9NW15 660 aa30.24■■■□□ 2.43
LDB1-202ENST00000425280 INF2Q27J81 1249 aa30.24■■■□□ 2.43
LDB1-202ENST00000425280 GMCL1P1Q8NEA9 526 aa30.24■■■□□ 2.43
LDB1-202ENST00000425280 USP17L10C9JJH3 530 aa30.23■■■□□ 2.43
LDB1-202ENST00000425280 MMP14P50281 582 aa30.23■■■□□ 2.43
LDB1-202ENST00000425280 KRT25Q7Z3Z0 450 aa30.23■■■□□ 2.43
LDB1-202ENST00000425280 PGAP2Q9UHJ9 254 aa30.23■■■□□ 2.43
LDB1-202ENST00000425280 F5H6K3 240 aa30.23■■■□□ 2.43
LDB1-202ENST00000425280 PPP1R11O60927 126 aaPredicted RBP30.23■■■□□ 2.43
LDB1-202ENST00000425280 KLRC3Q07444 240 aa30.23■■■□□ 2.43
LDB1-202ENST00000425280 C4orf32Q8N8J7 132 aa30.23■■■□□ 2.43
LDB1-202ENST00000425280 CNNM3Q8NE01 707 aa30.23■■■□□ 2.43
LDB1-202ENST00000425280 TRIM44Q96DX7 344 aaPredicted RBP30.23■■■□□ 2.43
LDB1-202ENST00000425280 POLR2DO15514 142 aaKnown RBP30.22■■■□□ 2.43
LDB1-202ENST00000425280 FZD9O00144 591 aa30.21■■■□□ 2.43
LDB1-202ENST00000425280 TBC1D12O60347 775 aa30.21■■■□□ 2.43
LDB1-202ENST00000425280 VWA3AA6NCI4 1184 aa30.21■■■□□ 2.43
LDB1-202ENST00000425280 ZBTB5O15062 677 aa30.21■■■□□ 2.43
LDB1-202ENST00000425280 ELOA2Q8IYF1 753 aaPredicted RBP30.21■■■□□ 2.43
LDB1-202ENST00000425280 EPSTI1Q96J88 318 aa30.21■■■□□ 2.43
LDB1-202ENST00000425280 AP5Z1O43299 807 aa30.2■■■□□ 2.43
LDB1-202ENST00000425280 NDUFB10O96000 172 aa30.2■■■□□ 2.43
LDB1-202ENST00000425280 EGFRP00533 1210 aa30.2■■■□□ 2.43
LDB1-202ENST00000425280 PPP1R18Q6NYC8 613 aa30.2■■■□□ 2.43
LDB1-202ENST00000425280 GMCL1Q96IK5 515 aa30.2■■■□□ 2.43
LDB1-202ENST00000425280 A0A1W2PRG0 241 aa30.19■■■□□ 2.42
LDB1-202ENST00000425280 GMPSP49915 693 aaPredicted RBP30.19■■■□□ 2.42
LDB1-202ENST00000425280 PNOCQ13519 176 aa30.19■■■□□ 2.42
LDB1-202ENST00000425280 IQCB1Q15051 598 aa30.19■■■□□ 2.42
LDB1-202ENST00000425280 NONOQ15233 471 aaKnown RBP eCLIP30.19■■■□□ 2.42
LDB1-202ENST00000425280 IL17AQ16552 155 aa30.19■■■□□ 2.42
LDB1-202ENST00000425280 REXO1Q8N1G1 1221 aaKnown RBP30.19■■■□□ 2.42
LDB1-202ENST00000425280 SYMPKQ92797 1274 aaKnown RBP30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms