RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 GREM1O60565 184 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 DNAJA2O60884 412 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 CTSWP56202 376 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 YBX1P67809 324 aaKnown RBP3.94□□□□□ -1.78
PMS1-209ENST00000424059 LAPTM5Q13571 262 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 ARSHQ5FYA8 562 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 GALNT18Q6P9A2 607 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 WAPLQ7Z5K2 1190 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 RGS22Q8NE09 1264 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 IPO4Q8TEX9 1081 aaKnown RBP3.94□□□□□ -1.78
PMS1-209ENST00000424059 TCTN2Q96GX1 697 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 FCRL2Q96LA5 508 aaPredicted RBP3.94□□□□□ -1.78
PMS1-209ENST00000424059 CNNM2Q9H8M5 875 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 KCNK12Q9HB15 430 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 GCM1Q9NP62 436 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 KCTD3Q9Y597 815 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 SIGLEC6O43699 453 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 HOXA5P20719 270 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 ERVFRD-1P60508 538 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 SECISBP2LQ93073 1101 aaKnown RBP3.94□□□□□ -1.78
PMS1-209ENST00000424059 SIGLEC10Q96LC7 697 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 FAM161BQ96MY7 647 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 IRF2BPLQ9H1B7 796 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 PARD6AQ9NPB6 346 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 KBTBD4Q9NVX7 518 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 TCFL5Q9UL49 500 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 PCDHB14Q9Y5E9 798 aa3.94□□□□□ -1.78
PMS1-209ENST00000424059 MEIS3P2A8K0S8 358 aa3.93□□□□□ -1.78
PMS1-209ENST00000424059 NOTOA8MTQ0 251 aa3.93□□□□□ -1.78
PMS1-209ENST00000424059 PSPNO60542 156 aa3.93□□□□□ -1.78
PMS1-209ENST00000424059 RPL10P27635 214 aaKnown RBP3.93□□□□□ -1.78
PMS1-209ENST00000424059 EIF4A3P38919 411 aaKnown RBP3.93□□□□□ -1.78
PMS1-209ENST00000424059 OVOS1Q6IE37 1185 aa3.93□□□□□ -1.78
PMS1-209ENST00000424059 CNPY4Q8N129 248 aa3.93□□□□□ -1.78
PMS1-209ENST00000424059 ZNF428Q96B54 188 aa3.93□□□□□ -1.78
PMS1-209ENST00000424059 FOXP3Q9BZS1 431 aa3.93□□□□□ -1.78
PMS1-209ENST00000424059 BRMS1Q9HCU9 246 aa3.93□□□□□ -1.78
PMS1-209ENST00000424059 EBF1Q9UH73 591 aa3.93□□□□□ -1.78
PMS1-209ENST00000424059 WTIPA6NIX2 430 aaPredicted RBP3.92□□□□□ -1.78
PMS1-209ENST00000424059 MINDY4BA8MYZ0 360 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 CLEC3AO75596 197 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 SYPP08247 313 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 BBS9Q3SYG4 887 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 ADGRF1Q5T601 910 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 AEBP1Q8IUX7 1158 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 FAM177A1Q8N128 213 aaPredicted RBP3.92□□□□□ -1.78
PMS1-209ENST00000424059 FBXO27Q8NI29 283 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 HHIPL1Q96JK4 782 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 SIRT5Q9NXA8 310 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 MBD1Q9UIS9 605 aaPredicted RBP3.92□□□□□ -1.78
PMS1-209ENST00000424059 TMEM82A0PJX8 343 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 F6X3S4 739 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 TNFRSF10CO14798 259 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 TLR3O15455 904 aaKnown RBP3.92□□□□□ -1.78
PMS1-209ENST00000424059 USP2O75604 605 aaPredicted RBP3.92□□□□□ -1.78
PMS1-209ENST00000424059 BMP8BP34820 402 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 ARL4AP40617 200 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 ZNF165P49910 485 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 SRSF3P84103 164 aaKnown RBP3.92□□□□□ -1.78
PMS1-209ENST00000424059 FBXL19Q6PCT2 694 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 CEP128Q6ZU80 1094 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 NLRC3Q7RTR2 1065 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 KCNC2Q96PR1 638 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 PLCD4Q9BRC7 762 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 ZCCHC4Q9H5U6 513 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 CHST7Q9NS84 486 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 IRAK3Q9Y616 596 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 TAF6LQ9Y6J9 622 aa3.92□□□□□ -1.78
PMS1-209ENST00000424059 IRS4O14654 1257 aaPredicted RBP3.91□□□□□ -1.78
PMS1-209ENST00000424059 N4BP3O15049 544 aa3.91□□□□□ -1.78
PMS1-209ENST00000424059 ZNF205O95201 554 aa3.91□□□□□ -1.78
PMS1-209ENST00000424059 CAP1Q01518 475 aa3.91□□□□□ -1.78
PMS1-209ENST00000424059 CCDC27Q2M243 656 aa3.91□□□□□ -1.78
PMS1-209ENST00000424059 HS2ST1Q7LGA3 356 aa3.91□□□□□ -1.78
PMS1-209ENST00000424059 TMC3Q7Z5M5 1100 aa3.91□□□□□ -1.78
PMS1-209ENST00000424059 ZNF296Q8WUU4 475 aaPredicted RBP3.91□□□□□ -1.78
PMS1-209ENST00000424059 RELTQ969Z4 430 aa3.91□□□□□ -1.78
PMS1-209ENST00000424059 ATG4CQ96DT6 458 aa3.91□□□□□ -1.78
PMS1-209ENST00000424059 RTEL1Q9NZ71 1219 aa3.91□□□□□ -1.78
PMS1-209ENST00000424059 KCNG1Q9UIX4 513 aa3.91□□□□□ -1.78
PMS1-209ENST00000424059 A0A1W2PQ45 241 aaPredicted RBP3.9□□□□□ -1.78
PMS1-209ENST00000424059 A0A1W2PQY0 241 aa3.9□□□□□ -1.78
PMS1-209ENST00000424059 FADS2P1A8MWK0 482 aa3.9□□□□□ -1.78
PMS1-209ENST00000424059 PRAMEF1O95521 474 aa3.9□□□□□ -1.78
PMS1-209ENST00000424059 MPOP05164 745 aa3.9□□□□□ -1.78
PMS1-209ENST00000424059 IMPDH2P12268 514 aa3.9□□□□□ -1.78
PMS1-209ENST00000424059 NME1P15531 152 aaKnown RBP3.9□□□□□ -1.78
PMS1-209ENST00000424059 SETQ01105 290 aaPredicted RBP3.9□□□□□ -1.78
PMS1-209ENST00000424059 SLITRK4Q8IW52 837 aa3.9□□□□□ -1.78
PMS1-209ENST00000424059 SMARCC1Q92922 1105 aaPredicted RBP3.9□□□□□ -1.78
PMS1-209ENST00000424059 EAF1Q96JC9 268 aaPredicted RBP3.9□□□□□ -1.78
PMS1-209ENST00000424059 NT5C1AQ9BXI3 368 aa3.9□□□□□ -1.78
PMS1-209ENST00000424059 PRDM14Q9GZV8 571 aa3.9□□□□□ -1.78
PMS1-209ENST00000424059 PCDHB12Q9Y5F1 795 aa3.9□□□□□ -1.78
PMS1-209ENST00000424059 GSNP06396 782 aa3.9□□□□□ -1.79
PMS1-209ENST00000424059 RTP1P59025 263 aa3.9□□□□□ -1.79
PMS1-209ENST00000424059 CBX2Q14781 532 aaPredicted RBP3.9□□□□□ -1.79
PMS1-209ENST00000424059 HSF5Q4G112 596 aaPredicted RBP3.9□□□□□ -1.79
PMS1-209ENST00000424059 SP8Q8IXZ3 490 aa3.9□□□□□ -1.79
PMS1-209ENST00000424059 TAB3Q8N5C8 712 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms