RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 GABPAQ06546 454 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 LETM2Q2VYF4 491 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 CFAP100Q494V2 611 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 ZNF579Q8NAF0 562 aaKnown RBP10.02□□□□□ -0.81
SNCA-206ENST00000420646 GJA10Q969M2 543 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 TEKT1Q969V4 418 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 EEF2KMTQ96G04 330 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 DNAJC18Q9H819 358 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 UQCRHLA0A096LP55 91 aa10.01□□□□□ -0.81
SNCA-206ENST00000420646 M0R2N6 131 aa10.01□□□□□ -0.81
SNCA-206ENST00000420646 UQCRHP07919 91 aa10.01□□□□□ -0.81
SNCA-206ENST00000420646 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.01□□□□□ -0.81
SNCA-206ENST00000420646 C4orf32Q8N8J7 132 aa10.01□□□□□ -0.81
SNCA-206ENST00000420646 ZNF287Q9HBT7 754 aa10.01□□□□□ -0.81
SNCA-206ENST00000420646 NFE2L3Q9Y4A8 694 aa10.01□□□□□ -0.81
SNCA-206ENST00000420646 MAST2Q6P0Q8 1798 aa10.01□□□□□ -0.81
SNCA-206ENST00000420646 TOP1P11387 765 aaKnown RBP10.01□□□□□ -0.81
SNCA-206ENST00000420646 SARSP49591 514 aaKnown RBP10.01□□□□□ -0.81
SNCA-206ENST00000420646 UBASH3AP57075 661 aa10.01□□□□□ -0.81
SNCA-206ENST00000420646 CUL4BQ13620 913 aa10.01□□□□□ -0.81
SNCA-206ENST00000420646 ARMCX5Q6P1M9 558 aa10.01□□□□□ -0.81
SNCA-206ENST00000420646 CREBRFQ8IUR6 639 aa10.01□□□□□ -0.81
SNCA-206ENST00000420646 LRRC15Q8TF66 581 aa10.01□□□□□ -0.81
SNCA-206ENST00000420646 OSBPL5Q9H0X9 879 aaPredicted RBP10.01□□□□□ -0.81
SNCA-206ENST00000420646 TDRD3Q9H7E2 651 aaKnown RBP10.01□□□□□ -0.81
SNCA-206ENST00000420646 SPTLC3Q9NUV7 552 aa10.01□□□□□ -0.81
SNCA-206ENST00000420646 CDK5RAP2Q96SN8 1893 aa10□□□□□ -0.81
SNCA-206ENST00000420646 SLFN14P0C7P3 912 aa10□□□□□ -0.81
SNCA-206ENST00000420646 DPYDQ12882 1025 aa10□□□□□ -0.81
SNCA-206ENST00000420646 SLC15A2Q16348 729 aa10□□□□□ -0.81
SNCA-206ENST00000420646 SH3BP5LQ7L8J4 393 aa10□□□□□ -0.81
SNCA-206ENST00000420646 BPIFA3Q9BQP9 254 aa10□□□□□ -0.81
SNCA-206ENST00000420646 INTS13Q9NVM9 706 aa10□□□□□ -0.81
SNCA-206ENST00000420646 NAV1Q8NEY1 1877 aa10□□□□□ -0.81
SNCA-206ENST00000420646 CCNT1O60563 726 aaKnown RBP10□□□□□ -0.81
SNCA-206ENST00000420646 GDF11O95390 407 aa10□□□□□ -0.81
SNCA-206ENST00000420646 CALML3P27482 149 aa10□□□□□ -0.81
SNCA-206ENST00000420646 MORC3Q14149 939 aa10□□□□□ -0.81
SNCA-206ENST00000420646 DHX8Q14562 1220 aaKnown RBP10□□□□□ -0.81
SNCA-206ENST00000420646 ZNF592Q92610 1267 aa10□□□□□ -0.81
SNCA-206ENST00000420646 ARID3AQ99856 593 aa10□□□□□ -0.81
SNCA-206ENST00000420646 SMTNL1A8MU46 457 aa10□□□□□ -0.81
SNCA-206ENST00000420646 CCZ1BP86790 482 aa10□□□□□ -0.81
SNCA-206ENST00000420646 CCZ1P86791 482 aaPredicted RBP10□□□□□ -0.81
SNCA-206ENST00000420646 DACT2Q5SW24 774 aa10□□□□□ -0.81
SNCA-206ENST00000420646 TMC4Q7Z404 712 aa10□□□□□ -0.81
SNCA-206ENST00000420646 RASSF8Q8NHQ8 419 aa10□□□□□ -0.81
SNCA-206ENST00000420646 FERMT2Q96AC1 680 aa10□□□□□ -0.81
SNCA-206ENST00000420646 FAM198AQ9UFP1 575 aa10□□□□□ -0.81
SNCA-206ENST00000420646 ZBTB12Q9Y330 459 aaPredicted RBP10□□□□□ -0.81
SNCA-206ENST00000420646 COL11A2P13942 1736 aaPredicted RBP9.99□□□□□ -0.81
SNCA-206ENST00000420646 DLEC1Q9Y238 1755 aa9.99□□□□□ -0.81
SNCA-206ENST00000420646 YDJCA8MPS7 323 aa9.99□□□□□ -0.81
SNCA-206ENST00000420646 PPP1R11O60927 126 aaPredicted RBP9.99□□□□□ -0.81
SNCA-206ENST00000420646 RAD17O75943 681 aa9.99□□□□□ -0.81
SNCA-206ENST00000420646 CDK11BP21127 795 aaKnown RBP9.99□□□□□ -0.81
SNCA-206ENST00000420646 GNAQP50148 359 aa9.99□□□□□ -0.81
SNCA-206ENST00000420646 JAG1P78504 1218 aa9.99□□□□□ -0.81
SNCA-206ENST00000420646 UBE2SQ16763 222 aa9.99□□□□□ -0.81
SNCA-206ENST00000420646 TMED8Q6PL24 325 aaPredicted RBP9.99□□□□□ -0.81
SNCA-206ENST00000420646 RRP36Q96EU6 259 aaKnown RBP9.99□□□□□ -0.81
SNCA-206ENST00000420646 PRMT6Q96LA8 375 aaPredicted RBP9.99□□□□□ -0.81
SNCA-206ENST00000420646 NUP88Q99567 741 aaPredicted RBP9.99□□□□□ -0.81
SNCA-206ENST00000420646 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.99□□□□□ -0.81
SNCA-206ENST00000420646 PPP1R1BQ9UD71 204 aaPredicted RBP9.99□□□□□ -0.81
SNCA-206ENST00000420646 SEC63Q9UGP8 760 aaKnown RBP9.99□□□□□ -0.81
SNCA-206ENST00000420646 LTBP1Q14766 1721 aa9.99□□□□□ -0.81
SNCA-206ENST00000420646 SLX4Q8IY92 1834 aa9.99□□□□□ -0.81
SNCA-206ENST00000420646 MYH1P12882 1939 aa9.99□□□□□ -0.81
SNCA-206ENST00000420646 USP17L10C9JJH3 530 aa9.99□□□□□ -0.81
SNCA-206ENST00000420646 IKBKBO14920 756 aa9.99□□□□□ -0.81
SNCA-206ENST00000420646 CDC25BP30305 580 aa9.99□□□□□ -0.81
SNCA-206ENST00000420646 E2F4Q16254 413 aa9.99□□□□□ -0.81
SNCA-206ENST00000420646 CCDC96Q2M329 555 aa9.99□□□□□ -0.81
SNCA-206ENST00000420646 PODNQ7Z5L7 613 aa9.99□□□□□ -0.81
SNCA-206ENST00000420646 CLRN2A0PK11 232 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 TECP42680 631 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 TPD52L1Q16890 204 aaPredicted RBP9.98□□□□□ -0.81
SNCA-206ENST00000420646 GLIPR1L2Q4G1C9 344 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 NT5DC1Q5TFE4 455 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 TBCKQ8TEA7 893 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 HOOK1Q9UJC3 728 aaKnown RBP9.98□□□□□ -0.81
SNCA-206ENST00000420646 SCN9AQ15858 1988 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 ZBTB22O15209 634 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 PPIP5K2O43314 1243 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 TPM3P06753 285 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 PDXDC2PQ6P474 469 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 DTHD1Q6ZMT9 781 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 SH3RF1Q7Z6J0 888 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 CDAN1Q8IWY9 1227 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 ADGRF4Q8IZF3 695 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 FLAD1Q8NFF5 587 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 SPATA20Q8TB22 786 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 SPZ1Q9BXG8 430 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 ZMYND12Q9H0C1 365 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 ZNF277Q9NRM2 450 aaPredicted RBP9.98□□□□□ -0.81
SNCA-206ENST00000420646 GDAQ9Y2T3 454 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 TTLL1O95922 423 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 TPM4P67936 248 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 RRP1BQ14684 758 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms