RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 TEX13BQ9BXU2 312 aa11.4□□□□□ -0.58
CTSA-205ENST00000419493 RAVER2Q9HCJ3 691 aaKnown RBP11.4□□□□□ -0.58
CTSA-205ENST00000419493 FLRT1Q9NZU1 646 aa11.4□□□□□ -0.58
CTSA-205ENST00000419493 PLXNB2O15031 1838 aa11.39□□□□□ -0.59
CTSA-205ENST00000419493 COBLO75128 1261 aa11.39□□□□□ -0.59
CTSA-205ENST00000419493 HOXC6P09630 235 aa11.39□□□□□ -0.59
CTSA-205ENST00000419493 TOP1P11387 765 aaKnown RBP11.39□□□□□ -0.59
CTSA-205ENST00000419493 CHMLP26374 656 aa11.39□□□□□ -0.59
CTSA-205ENST00000419493 COPB2P35606 906 aa11.39□□□□□ -0.59
CTSA-205ENST00000419493 MAP3K21Q5TCX8 1036 aa11.39□□□□□ -0.59
CTSA-205ENST00000419493 RCSD1Q6JBY9 416 aa11.39□□□□□ -0.59
CTSA-205ENST00000419493 FAM160B2Q86V87 743 aa11.39□□□□□ -0.59
CTSA-205ENST00000419493 IQCA1Q86XH1 822 aa11.39□□□□□ -0.59
CTSA-205ENST00000419493 DDX11Q96FC9 970 aa11.39□□□□□ -0.59
CTSA-205ENST00000419493 ZKSCAN3Q9BRR0 538 aa11.39□□□□□ -0.59
CTSA-205ENST00000419493 TCP11L1Q9NUJ3 509 aa11.39□□□□□ -0.59
CTSA-205ENST00000419493 ZNF214Q9UL59 606 aaPredicted RBP11.39□□□□□ -0.59
CTSA-205ENST00000419493 RLFQ13129 1914 aa11.39□□□□□ -0.59
CTSA-205ENST00000419493 NEDD4P46934 1319 aa11.38□□□□□ -0.59
CTSA-205ENST00000419493 B4E1Z4 1266 aa11.38□□□□□ -0.59
CTSA-205ENST00000419493 KDM4AO75164 1064 aa11.38□□□□□ -0.59
CTSA-205ENST00000419493 PGK2P07205 417 aa11.38□□□□□ -0.59
CTSA-205ENST00000419493 FDX1P10109 184 aa11.38□□□□□ -0.59
CTSA-205ENST00000419493 PRPF38BQ5VTL8 546 aaKnown RBP11.38□□□□□ -0.59
CTSA-205ENST00000419493 CENPQQ7L2Z9 268 aaPredicted RBP11.38□□□□□ -0.59
CTSA-205ENST00000419493 ABRAQ8N0Z2 381 aa11.38□□□□□ -0.59
CTSA-205ENST00000419493 REPS2Q8NFH8 660 aa11.38□□□□□ -0.59
CTSA-205ENST00000419493 GMCL1Q96IK5 515 aa11.38□□□□□ -0.59
CTSA-205ENST00000419493 PAWRQ96IZ0 340 aaKnown RBP11.38□□□□□ -0.59
CTSA-205ENST00000419493 TTC14Q96N46 770 aa11.38□□□□□ -0.59
CTSA-205ENST00000419493 TMEM47Q9BQJ4 181 aa11.38□□□□□ -0.59
CTSA-205ENST00000419493 NBPF3Q9H094 633 aa11.38□□□□□ -0.59
CTSA-205ENST00000419493 CRISPLD2Q9H0B8 497 aa11.38□□□□□ -0.59
CTSA-205ENST00000419493 SLC38A10Q9HBR0 1119 aa11.38□□□□□ -0.59
CTSA-205ENST00000419493 HOMER2Q9NSB8 354 aa11.38□□□□□ -0.59
CTSA-205ENST00000419493 RIPK3Q9Y572 518 aa11.38□□□□□ -0.59
CTSA-205ENST00000419493 RAD50Q92878 1312 aa11.37□□□□□ -0.59
CTSA-205ENST00000419493 COL11A1P12107 1806 aaPredicted RBP11.37□□□□□ -0.59
CTSA-205ENST00000419493 ATP2A1O14983 1001 aa11.37□□□□□ -0.59
CTSA-205ENST00000419493 NEFLP07196 543 aa11.37□□□□□ -0.59
CTSA-205ENST00000419493 SNAP25P60880 206 aa11.37□□□□□ -0.59
CTSA-205ENST00000419493 CCDC178Q5BJE1 867 aa11.37□□□□□ -0.59
CTSA-205ENST00000419493 PRAMEF19Q5SWL8 479 aa11.37□□□□□ -0.59
CTSA-205ENST00000419493 OLFML2BQ68BL8 750 aa11.37□□□□□ -0.59
CTSA-205ENST00000419493 CCDC174Q6PII3 467 aa11.37□□□□□ -0.59
CTSA-205ENST00000419493 KIAA1211Q6ZU35 1233 aa11.37□□□□□ -0.59
CTSA-205ENST00000419493 NECAB2Q7Z6G3 386 aa11.37□□□□□ -0.59
CTSA-205ENST00000419493 ANKRD35Q8N283 1001 aa11.37□□□□□ -0.59
CTSA-205ENST00000419493 ANKLE1Q8NAG6 615 aa11.37□□□□□ -0.59
CTSA-205ENST00000419493 DCAF4Q8WV16 495 aa11.37□□□□□ -0.59
CTSA-205ENST00000419493 MAML3Q96JK9 1138 aa11.37□□□□□ -0.59
CTSA-205ENST00000419493 CCDC136Q96JN2 1154 aa11.37□□□□□ -0.59
CTSA-205ENST00000419493 KRT23Q9C075 422 aa11.37□□□□□ -0.59
CTSA-205ENST00000419493 IL25Q9H293 177 aa11.37□□□□□ -0.59
CTSA-205ENST00000419493 CNNM2Q9H8M5 875 aa11.37□□□□□ -0.59
CTSA-205ENST00000419493 GPCPD1Q9NPB8 672 aa11.37□□□□□ -0.59
CTSA-205ENST00000419493 FRMPD2Q68DX3 1309 aaPredicted RBP11.36□□□□□ -0.59
CTSA-205ENST00000419493 A0A0G2JMZ2 1700 aa11.36□□□□□ -0.59
CTSA-205ENST00000419493 MYCNP04198 464 aaPredicted RBP11.36□□□□□ -0.59
CTSA-205ENST00000419493 ALAS1P13196 640 aa11.36□□□□□ -0.59
CTSA-205ENST00000419493 SLC16A2P36021 539 aa11.36□□□□□ -0.59
CTSA-205ENST00000419493 OAZ1P54368 228 aa11.36□□□□□ -0.59
CTSA-205ENST00000419493 TRDNQ13061 729 aa11.36□□□□□ -0.59
CTSA-205ENST00000419493 RASGRP2Q7LDG7 609 aa11.36□□□□□ -0.59
CTSA-205ENST00000419493 CHST13Q8NET6 341 aa11.36□□□□□ -0.59
CTSA-205ENST00000419493 DIS3LQ8TF46 1054 aaKnown RBP11.36□□□□□ -0.59
CTSA-205ENST00000419493 UBAC1Q9BSL1 405 aa11.36□□□□□ -0.59
CTSA-205ENST00000419493 ZSWIM5Q9P217 1185 aa11.36□□□□□ -0.59
CTSA-205ENST00000419493 FBXO40Q9UH90 709 aa11.36□□□□□ -0.59
CTSA-205ENST00000419493 PRR12Q9ULL5 1215 aa11.36□□□□□ -0.59
CTSA-205ENST00000419493 PARP14Q460N5 1801 aa11.36□□□□□ -0.59
CTSA-205ENST00000419493 EVI5O60447 810 aa11.35□□□□□ -0.59
CTSA-205ENST00000419493 MSCO60682 206 aa11.35□□□□□ -0.59
CTSA-205ENST00000419493 PLA2G6O60733 806 aa11.35□□□□□ -0.59
CTSA-205ENST00000419493 NOVP48745 357 aa11.35□□□□□ -0.59
CTSA-205ENST00000419493 PTH1RQ03431 593 aa11.35□□□□□ -0.59
CTSA-205ENST00000419493 ANO1Q5XXA6 986 aa11.35□□□□□ -0.59
CTSA-205ENST00000419493 TTBK2Q6IQ55 1244 aa11.35□□□□□ -0.59
CTSA-205ENST00000419493 SKAP1Q86WV1 359 aa11.35□□□□□ -0.59
CTSA-205ENST00000419493 DGKHQ86XP1 1220 aa11.35□□□□□ -0.59
CTSA-205ENST00000419493 AGBL1Q96MI9 1066 aa11.35□□□□□ -0.59
CTSA-205ENST00000419493 TRERF1Q96PN7 1200 aa11.35□□□□□ -0.59
CTSA-205ENST00000419493 ZSCAN10Q96SZ4 725 aaPredicted RBP11.35□□□□□ -0.59
CTSA-205ENST00000419493 TINF2Q9BSI4 451 aa11.35□□□□□ -0.59
CTSA-205ENST00000419493 C11orf49Q9H6J7 331 aa11.35□□□□□ -0.59
CTSA-205ENST00000419493 KAT14Q9H8E8 782 aa11.35□□□□□ -0.59
CTSA-205ENST00000419493 DDX20Q9UHI6 824 aaKnown RBP11.35□□□□□ -0.59
CTSA-205ENST00000419493 OGDHLQ9ULD0 1010 aa11.35□□□□□ -0.59
CTSA-205ENST00000419493 DIS3Q9Y2L1 958 aaKnown RBP11.35□□□□□ -0.59
CTSA-205ENST00000419493 U3KPZ7 1027 aaPredicted RBP11.35□□□□□ -0.59
CTSA-205ENST00000419493 ZNFX1Q9P2E3 1918 aaKnown RBP11.35□□□□□ -0.59
CTSA-205ENST00000419493 SGSM2O43147 1006 aa11.34□□□□□ -0.59
CTSA-205ENST00000419493 PDHBP11177 359 aa11.34□□□□□ -0.59
CTSA-205ENST00000419493 CYBAP13498 195 aa11.34□□□□□ -0.59
CTSA-205ENST00000419493 NT5C2P49902 561 aa11.34□□□□□ -0.59
CTSA-205ENST00000419493 ZNF792Q3KQV3 632 aa11.34□□□□□ -0.59
CTSA-205ENST00000419493 SYDE2Q5VT97 1194 aa11.34□□□□□ -0.59
CTSA-205ENST00000419493 LHX8Q68G74 356 aa11.34□□□□□ -0.59
CTSA-205ENST00000419493 UBE2Q1Q7Z7E8 422 aa11.34□□□□□ -0.59
CTSA-205ENST00000419493 PNMA1Q8ND90 353 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms