RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 LINC00116Q8NCU8 138 aa7.19□□□□□ -1.26
HMGB1P49-201ENST00000418882 FLAD1Q8NFF5 587 aa7.19□□□□□ -1.26
HMGB1P49-201ENST00000418882 ADCY4Q8NFM4 1077 aa7.19□□□□□ -1.26
HMGB1P49-201ENST00000418882 LGR4Q9BXB1 951 aa7.19□□□□□ -1.26
HMGB1P49-201ENST00000418882 PRR13Q9NZ81 148 aa7.19□□□□□ -1.26
HMGB1P49-201ENST00000418882 CARMIL2Q6F5E8 1435 aa7.18□□□□□ -1.26
HMGB1P49-201ENST00000418882 KLF4O43474 513 aa7.18□□□□□ -1.26
HMGB1P49-201ENST00000418882 TIGD5Q53EQ6 642 aa7.18□□□□□ -1.26
HMGB1P49-201ENST00000418882 TNNI3KQ59H18 835 aa7.18□□□□□ -1.26
HMGB1P49-201ENST00000418882 ANKS3Q6ZW76 656 aa7.18□□□□□ -1.26
HMGB1P49-201ENST00000418882 NOL6Q9H6R4 1146 aaKnown RBP7.18□□□□□ -1.26
HMGB1P49-201ENST00000418882 FHOD1Q9Y613 1164 aa7.18□□□□□ -1.26
HMGB1P49-201ENST00000418882 ZNF205O95201 554 aa7.17□□□□□ -1.26
HMGB1P49-201ENST00000418882 BMP8BP34820 402 aa7.17□□□□□ -1.26
HMGB1P49-201ENST00000418882 TRHRP34981 398 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P49-201ENST00000418882 GDNFP39905 211 aa7.17□□□□□ -1.26
HMGB1P49-201ENST00000418882 RTP2Q5QGT7 225 aa7.17□□□□□ -1.26
HMGB1P49-201ENST00000418882 HEATR6Q6AI08 1181 aaKnown RBP7.17□□□□□ -1.26
HMGB1P49-201ENST00000418882 RNF111Q6ZNA4 994 aa7.17□□□□□ -1.26
HMGB1P49-201ENST00000418882 ATG4DQ86TL0 474 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P49-201ENST00000418882 LINC01599Q8WXQ3 324 aa7.17□□□□□ -1.26
HMGB1P49-201ENST00000418882 MCMBPQ9BTE3 642 aa7.17□□□□□ -1.26
HMGB1P49-201ENST00000418882 DSCC1Q9BVC3 393 aa7.17□□□□□ -1.26
HMGB1P49-201ENST00000418882 TANGO6Q9C0B7 1094 aa7.17□□□□□ -1.26
HMGB1P49-201ENST00000418882 NOTOA8MTQ0 251 aa7.16□□□□□ -1.26
HMGB1P49-201ENST00000418882 ITGA4P13612 1032 aa7.16□□□□□ -1.26
HMGB1P49-201ENST00000418882 VAV1P15498 845 aa7.16□□□□□ -1.26
HMGB1P49-201ENST00000418882 RPL10P27635 214 aaKnown RBP7.16□□□□□ -1.26
HMGB1P49-201ENST00000418882 PCBP3P57721 371 aaKnown RBP7.16□□□□□ -1.26
HMGB1P49-201ENST00000418882 PPP2R5DQ14738 602 aa7.16□□□□□ -1.26
HMGB1P49-201ENST00000418882 NOL9Q5SY16 702 aaKnown RBP7.16□□□□□ -1.26
HMGB1P49-201ENST00000418882 WAPLQ7Z5K2 1190 aa7.16□□□□□ -1.26
HMGB1P49-201ENST00000418882 FAM178BQ8IXR5 827 aa7.16□□□□□ -1.26
HMGB1P49-201ENST00000418882 ZDHHC15Q96MV8 337 aa7.16□□□□□ -1.26
HMGB1P49-201ENST00000418882 SLC12A9Q9BXP2 914 aa7.16□□□□□ -1.26
HMGB1P49-201ENST00000418882 WHRNQ9P202 907 aa7.16□□□□□ -1.26
HMGB1P49-201ENST00000418882 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P49-201ENST00000418882 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P49-201ENST00000418882 GJB6O95452 261 aa7.15□□□□□ -1.26
HMGB1P49-201ENST00000418882 DHX38Q92620 1227 aaKnown RBP7.15□□□□□ -1.26
HMGB1P49-201ENST00000418882 C19orf44Q9H6X5 657 aa7.15□□□□□ -1.26
HMGB1P49-201ENST00000418882 ST7Q9NRC1 585 aa7.15□□□□□ -1.26
HMGB1P49-201ENST00000418882 AP5S1Q9NUS5 200 aa7.15□□□□□ -1.26
HMGB1P49-201ENST00000418882 CGGBP1Q9UFW8 167 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P49-201ENST00000418882 USP2O75604 605 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P49-201ENST00000418882 HPXP02790 462 aa7.14□□□□□ -1.27
HMGB1P49-201ENST00000418882 GSNP06396 782 aa7.14□□□□□ -1.27
HMGB1P49-201ENST00000418882 IFNGR1P15260 489 aa7.14□□□□□ -1.27
HMGB1P49-201ENST00000418882 TCEAL1Q15170 157 aa7.14□□□□□ -1.27
HMGB1P49-201ENST00000418882 ADAT2Q7Z6V5 191 aaKnown RBP7.14□□□□□ -1.27
HMGB1P49-201ENST00000418882 TMEM52Q8NDY8 209 aa7.14□□□□□ -1.27
HMGB1P49-201ENST00000418882 HHIPL1Q96JK4 782 aa7.14□□□□□ -1.27
HMGB1P49-201ENST00000418882 ERVK13-1Q9NX77 482 aa7.14□□□□□ -1.27
HMGB1P49-201ENST00000418882 A0A087WZG4 1122 aa7.13□□□□□ -1.27
HMGB1P49-201ENST00000418882 ANKRD34BA5PLL1 514 aa7.13□□□□□ -1.27
HMGB1P49-201ENST00000418882 TBX1O43435 398 aa7.13□□□□□ -1.27
HMGB1P49-201ENST00000418882 VAMP4O75379 141 aa7.13□□□□□ -1.27
HMGB1P49-201ENST00000418882 DDAH1O94760 285 aa7.13□□□□□ -1.27
HMGB1P49-201ENST00000418882 GALK1P51570 392 aa7.13□□□□□ -1.27
HMGB1P49-201ENST00000418882 NCAPHQ15003 741 aa7.13□□□□□ -1.27
HMGB1P49-201ENST00000418882 ARHGEF39Q8N4T4 335 aa7.13□□□□□ -1.27
HMGB1P49-201ENST00000418882 MAP6Q96JE9 813 aa7.13□□□□□ -1.27
HMGB1P49-201ENST00000418882 FCRL3Q96P31 734 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P49-201ENST00000418882 ZNF503-AS2A6NEH8 195 aa7.12□□□□□ -1.27
HMGB1P49-201ENST00000418882 SUSD5O60279 629 aa7.12□□□□□ -1.27
HMGB1P49-201ENST00000418882 CD3EP07766 207 aa7.12□□□□□ -1.27
HMGB1P49-201ENST00000418882 JUNBP17275 347 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P49-201ENST00000418882 RAB33AQ14088 237 aa7.12□□□□□ -1.27
HMGB1P49-201ENST00000418882 KIR3DS1Q14943 382 aa7.12□□□□□ -1.27
HMGB1P49-201ENST00000418882 FXNQ16595 210 aa7.12□□□□□ -1.27
HMGB1P49-201ENST00000418882 DDR2Q16832 855 aa7.12□□□□□ -1.27
HMGB1P49-201ENST00000418882 PDZD8Q8NEN9 1154 aa7.12□□□□□ -1.27
HMGB1P49-201ENST00000418882 FAM168AQ92567 244 aa7.12□□□□□ -1.27
HMGB1P49-201ENST00000418882 CDADC1Q9BWV3 514 aa7.12□□□□□ -1.27
HMGB1P49-201ENST00000418882 GBP3Q9H0R5 595 aa7.12□□□□□ -1.27
HMGB1P49-201ENST00000418882 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.12□□□□□ -1.27
HMGB1P49-201ENST00000418882 ZMYM5Q9UJ78 669 aa7.12□□□□□ -1.27
HMGB1P49-201ENST00000418882 SSU72P8A0A1W2PR75 194 aa7.11□□□□□ -1.27
HMGB1P49-201ENST00000418882 STXBP3O00186 592 aa7.11□□□□□ -1.27
HMGB1P49-201ENST00000418882 STK10O94804 968 aaKnown RBP7.11□□□□□ -1.27
HMGB1P49-201ENST00000418882 GSTM1P09488 218 aa7.11□□□□□ -1.27
HMGB1P49-201ENST00000418882 ATP2B1P20020 1258 aa7.11□□□□□ -1.27
HMGB1P49-201ENST00000418882 CYP4F3Q08477 520 aa7.11□□□□□ -1.27
HMGB1P49-201ENST00000418882 DPY19L1Q2PZI1 675 aa7.11□□□□□ -1.27
HMGB1P49-201ENST00000418882 SHISA4Q96DD7 197 aa7.11□□□□□ -1.27
HMGB1P49-201ENST00000418882 RCC1LQ96I51 464 aaKnown RBP7.11□□□□□ -1.27
HMGB1P49-201ENST00000418882 KIRREL1Q96J84 757 aa7.11□□□□□ -1.27
HMGB1P49-201ENST00000418882 FCRL2Q96LA5 508 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P49-201ENST00000418882 RNF32Q9H0A6 362 aa7.11□□□□□ -1.27
HMGB1P49-201ENST00000418882 DIS3Q9Y2L1 958 aaKnown RBP7.11□□□□□ -1.27
HMGB1P49-201ENST00000418882 GPR55Q9Y2T6 319 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P49-201ENST00000418882 SF3B6Q9Y3B4 125 aaKnown RBP7.11□□□□□ -1.27
HMGB1P49-201ENST00000418882 EMC9Q9Y3B6 208 aa7.11□□□□□ -1.27
HMGB1P49-201ENST00000418882 FADS2P1A8MWK0 482 aa7.1□□□□□ -1.27
HMGB1P49-201ENST00000418882 PSPNO60542 156 aa7.1□□□□□ -1.27
HMGB1P49-201ENST00000418882 PPM1BO75688 479 aa7.1□□□□□ -1.27
HMGB1P49-201ENST00000418882 GTF2F1P35269 517 aaKnown RBP eCLIP7.1□□□□□ -1.27
HMGB1P49-201ENST00000418882 AFMP43652 599 aa7.1□□□□□ -1.27
HMGB1P49-201ENST00000418882 CWF19L1Q69YN2 538 aaKnown RBP7.1□□□□□ -1.27
HMGB1P49-201ENST00000418882 ZSWIM9Q86XI8 627 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms