RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 RAB21Q9UL25 225 aa13.05□□□□□ -0.32
DDR1-232ENST00000418800 PLEKHG1Q9ULL1 1385 aa13.05□□□□□ -0.32
DDR1-232ENST00000418800 CHUKO15111 745 aa13.05□□□□□ -0.32
DDR1-232ENST00000418800 DEXIO95424 95 aa13.05□□□□□ -0.32
DDR1-232ENST00000418800 CYP7A1P22680 504 aa13.05□□□□□ -0.32
DDR1-232ENST00000418800 CDC25CP30307 473 aa13.05□□□□□ -0.32
DDR1-232ENST00000418800 VAV2P52735 878 aa13.05□□□□□ -0.32
DDR1-232ENST00000418800 FOXO4P98177 505 aa13.05□□□□□ -0.32
DDR1-232ENST00000418800 C2CD5Q86YS7 1000 aa13.05□□□□□ -0.32
DDR1-232ENST00000418800 KLHL7Q8IXQ5 586 aa13.05□□□□□ -0.32
DDR1-232ENST00000418800 HDAC7Q8WUI4 952 aa13.05□□□□□ -0.32
DDR1-232ENST00000418800 TMEM87BQ96K49 555 aa13.05□□□□□ -0.32
DDR1-232ENST00000418800 A0A1B0GTH6 734 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 EIF3HO15372 352 aaKnown RBP eCLIP13.04□□□□□ -0.325e-6■■■□□ 14.9
DDR1-232ENST00000418800 ARHGAP25P42331 645 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 TTC38Q5R3I4 469 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 IFIT1BQ5T764 474 aaKnown RBP13.04□□□□□ -0.32
DDR1-232ENST00000418800 MSL1Q68DK7 614 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 C8orf74Q6P047 294 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 CPLX4Q7Z7G2 160 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 CATIPQ7Z7H3 387 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 ZNF654Q8IZM8 581 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 CSGALNACT2Q8N6G5 542 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 FANCBQ8NB91 859 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 CCDC47Q96A33 483 aaKnown RBP13.04□□□□□ -0.32
DDR1-232ENST00000418800 ADD3Q9UEY8 706 aaKnown RBP13.04□□□□□ -0.32
DDR1-232ENST00000418800 FBXO2Q9UK22 296 aaPredicted RBP13.04□□□□□ -0.32
DDR1-232ENST00000418800 ADGRL3Q9HAR2 1447 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 CLTAP09496 248 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 KRT83P78385 493 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 KCNV1Q6PIU1 500 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 MAP3K14Q99558 947 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 KLC4Q9NSK0 619 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 NCK2O43639 380 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 PDHBP11177 359 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 ERCC5P28715 1186 aaPredicted RBP13.04□□□□□ -0.32
DDR1-232ENST00000418800 KLK7P49862 253 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 TCP11Q8WWU5 503 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 GREM2Q9H772 168 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 NLRC4Q9NPP4 1024 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 LRWD1Q9UFC0 647 aa13.04□□□□□ -0.32
DDR1-232ENST00000418800 TMEM94Q12767 1356 aa13.03□□□□□ -0.32
DDR1-232ENST00000418800 TACC1O75410 805 aa13.03□□□□□ -0.32
DDR1-232ENST00000418800 PHKG2P15735 406 aa13.03□□□□□ -0.32
DDR1-232ENST00000418800 ASIC1P78348 528 aa13.03□□□□□ -0.32
DDR1-232ENST00000418800 LRRC1Q9BTT6 524 aa13.03□□□□□ -0.32
DDR1-232ENST00000418800 CEMIPQ8WUJ3 1361 aa13.03□□□□□ -0.32
DDR1-232ENST00000418800 ENO4A6NNW6 628 aa13.03□□□□□ -0.32
DDR1-232ENST00000418800 PP2D1A8MPX8 630 aa13.03□□□□□ -0.32
DDR1-232ENST00000418800 BUB1BO60566 1050 aaPredicted RBP13.03□□□□□ -0.32
DDR1-232ENST00000418800 MOCS3O95396 460 aa13.03□□□□□ -0.32
DDR1-232ENST00000418800 MYBL1P10243 752 aa13.03□□□□□ -0.32
DDR1-232ENST00000418800 USP5P45974 858 aa13.03□□□□□ -0.32
DDR1-232ENST00000418800 TUBB4BP68371 445 aa13.03□□□□□ -0.32
DDR1-232ENST00000418800 SPAG1Q07617 926 aa13.03□□□□□ -0.32
DDR1-232ENST00000418800 TBX2Q13207 712 aaPredicted RBP13.03□□□□□ -0.32
DDR1-232ENST00000418800 PPP1R7Q15435 360 aa13.03□□□□□ -0.32
DDR1-232ENST00000418800 AKNAD1Q5T1N1 836 aa13.03□□□□□ -0.32
DDR1-232ENST00000418800 THOC1Q96FV9 657 aaKnown RBP13.03□□□□□ -0.32
DDR1-232ENST00000418800 MLXIPQ9HAP2 919 aa13.03□□□□□ -0.32
DDR1-232ENST00000418800 AGPAT5Q9NUQ2 364 aa13.03□□□□□ -0.32
DDR1-232ENST00000418800 DMGDHQ9UI17 866 aaKnown RBP13.03□□□□□ -0.32
DDR1-232ENST00000418800 SMIM22K7EJ46 135 aa13.02□□□□□ -0.32
DDR1-232ENST00000418800 PARP1P09874 1014 aaKnown RBP13.02□□□□□ -0.32
DDR1-232ENST00000418800 FAM47AQ5JRC9 791 aa13.02□□□□□ -0.32
DDR1-232ENST00000418800 RASGRP2Q7LDG7 609 aa13.02□□□□□ -0.32
DDR1-232ENST00000418800 ACSBG1Q96GR2 724 aa13.02□□□□□ -0.32
DDR1-232ENST00000418800 NOC4LQ9BVI4 516 aaKnown RBP13.02□□□□□ -0.32
DDR1-232ENST00000418800 AGXT2Q9BYV1 514 aa13.02□□□□□ -0.32
DDR1-232ENST00000418800 TRIM31Q9BZY9 425 aa13.02□□□□□ -0.32
DDR1-232ENST00000418800 LY9Q9HBG7 655 aa13.02□□□□□ -0.32
DDR1-232ENST00000418800 A0A087X0B3 334 aa13.02□□□□□ -0.32
DDR1-232ENST00000418800 NBPF26B4DH59 902 aa13.02□□□□□ -0.32
DDR1-232ENST00000418800 PSMA7O14818 248 aa13.02□□□□□ -0.32
DDR1-232ENST00000418800 GUCY2DQ02846 1103 aa13.02□□□□□ -0.32
DDR1-232ENST00000418800 SNCBQ16143 134 aa13.02□□□□□ -0.32
DDR1-232ENST00000418800 NBPF14Q5TI25 921 aa13.02□□□□□ -0.32
DDR1-232ENST00000418800 NBPF10Q6P3W6 841 aaKnown RBP13.02□□□□□ -0.32
DDR1-232ENST00000418800 NBPF15Q8N660 670 aa13.02□□□□□ -0.32
DDR1-232ENST00000418800 MED15Q96RN5 788 aa13.02□□□□□ -0.32
DDR1-232ENST00000418800 TRIM6Q9C030 488 aaPredicted RBP13.02□□□□□ -0.32
DDR1-232ENST00000418800 KRT23Q9C075 422 aa13.02□□□□□ -0.32
DDR1-232ENST00000418800 SRPRBQ9Y5M8 271 aaKnown RBP13.02□□□□□ -0.32
DDR1-232ENST00000418800 ANKRD26Q9UPS8 1709 aa13.02□□□□□ -0.33
DDR1-232ENST00000418800 CCDC194A0A1B0GVG4 234 aa13.02□□□□□ -0.33
DDR1-232ENST00000418800 TLDC2A0PJX2 215 aa13.02□□□□□ -0.33
DDR1-232ENST00000418800 TMCO5BA8MYB1 307 aa13.02□□□□□ -0.33
DDR1-232ENST00000418800 MEFVO15553 781 aaPredicted RBP13.02□□□□□ -0.33
DDR1-232ENST00000418800 ZNF18P17022 549 aa13.02□□□□□ -0.33
DDR1-232ENST00000418800 TUBB2AQ13885 445 aa13.02□□□□□ -0.33
DDR1-232ENST00000418800 TUBB2BQ9BVA1 445 aa13.02□□□□□ -0.33
DDR1-232ENST00000418800 LACRTQ9GZZ8 138 aa13.02□□□□□ -0.33
DDR1-232ENST00000418800 HAUS4Q9H6D7 363 aa13.02□□□□□ -0.33
DDR1-232ENST00000418800 NFU1Q9UMS0 254 aa13.02□□□□□ -0.33
DDR1-232ENST00000418800 PLEKHA8P1O95397 391 aa13.01□□□□□ -0.33
DDR1-232ENST00000418800 IFIH1Q9BYX4 1025 aaKnown RBP13.01□□□□□ -0.33
DDR1-232ENST00000418800 NBPF3Q9H094 633 aa13.01□□□□□ -0.33
DDR1-232ENST00000418800 HAUS2Q9NVX0 235 aa13.01□□□□□ -0.33
DDR1-232ENST00000418800 CHRM1P11229 460 aaPredicted RBP13.01□□□□□ -0.33
DDR1-232ENST00000418800 TCIRG1Q13488 830 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms