RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 ZNF574Q6ZN55 896 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P11-201ENST00000413899 CREG2Q8IUH2 290 aa5.89□□□□□ -1.47
HMGB1P11-201ENST00000413899 FIBCD1Q8N539 461 aa5.89□□□□□ -1.47
HMGB1P11-201ENST00000413899 AGBL5Q8NDL9 886 aa5.89□□□□□ -1.47
HMGB1P11-201ENST00000413899 LNPKQ9C0E8 428 aa5.89□□□□□ -1.47
HMGB1P11-201ENST00000413899 APEX2Q9UBZ4 518 aa5.89□□□□□ -1.47
HMGB1P11-201ENST00000413899 ZNF281Q9Y2X9 895 aa5.89□□□□□ -1.47
HMGB1P11-201ENST00000413899 SF3B6Q9Y3B4 125 aaKnown RBP5.89□□□□□ -1.47
HMGB1P11-201ENST00000413899 SCO2A0A1W2PP80 73 aa5.88□□□□□ -1.47
HMGB1P11-201ENST00000413899 TEKQ02763 1124 aa5.88□□□□□ -1.47
HMGB1P11-201ENST00000413899 GRB10Q13322 594 aa5.88□□□□□ -1.47
HMGB1P11-201ENST00000413899 RASA3Q14644 834 aa5.88□□□□□ -1.47
HMGB1P11-201ENST00000413899 PMFBP1Q8TBY8 1022 aa5.88□□□□□ -1.47
HMGB1P11-201ENST00000413899 BRF1Q92994 677 aa5.88□□□□□ -1.47
HMGB1P11-201ENST00000413899 FGD4Q96M96 766 aa5.88□□□□□ -1.47
HMGB1P11-201ENST00000413899 DSCC1Q9BVC3 393 aa5.88□□□□□ -1.47
HMGB1P11-201ENST00000413899 USP35Q9P2H5 1018 aa5.88□□□□□ -1.47
HMGB1P11-201ENST00000413899 CGGBP1Q9UFW8 167 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P11-201ENST00000413899 MINPP1Q9UNW1 487 aa5.88□□□□□ -1.47
HMGB1P11-201ENST00000413899 EMC9Q9Y3B6 208 aa5.88□□□□□ -1.47
HMGB1P11-201ENST00000413899 PCDHA11Q9Y5I1 949 aa5.88□□□□□ -1.47
HMGB1P11-201ENST00000413899 H0Y8X5 98 aa5.87□□□□□ -1.47
HMGB1P11-201ENST00000413899 PDPK1O15530 556 aa5.87□□□□□ -1.47
HMGB1P11-201ENST00000413899 ZNF205O95201 554 aa5.87□□□□□ -1.47
HMGB1P11-201ENST00000413899 CAPNS1P04632 268 aa5.87□□□□□ -1.47
HMGB1P11-201ENST00000413899 ENDOUP21128 410 aaKnown RBP5.87□□□□□ -1.47
HMGB1P11-201ENST00000413899 LTKP29376 864 aa5.87□□□□□ -1.47
HMGB1P11-201ENST00000413899 PCBP3P57721 371 aaKnown RBP5.87□□□□□ -1.47
HMGB1P11-201ENST00000413899 ZP2Q05996 745 aa5.87□□□□□ -1.47
HMGB1P11-201ENST00000413899 EGR3Q06889 387 aa5.87□□□□□ -1.47
HMGB1P11-201ENST00000413899 SLC23A3Q6PIS1 610 aa5.87□□□□□ -1.47
HMGB1P11-201ENST00000413899 ADAT2Q7Z6V5 191 aaKnown RBP5.87□□□□□ -1.47
HMGB1P11-201ENST00000413899 BVESQ8NE79 360 aa5.87□□□□□ -1.47
HMGB1P11-201ENST00000413899 MRGPRX3Q96LB0 322 aa5.87□□□□□ -1.47
HMGB1P11-201ENST00000413899 DEPDC7Q96QD5 511 aa5.87□□□□□ -1.47
HMGB1P11-201ENST00000413899 NOL6Q9H6R4 1146 aaKnown RBP5.87□□□□□ -1.47
HMGB1P11-201ENST00000413899 CARS2Q9HA77 564 aaKnown RBP5.87□□□□□ -1.47
HMGB1P11-201ENST00000413899 SNTG2Q9NY99 539 aa5.87□□□□□ -1.47
HMGB1P11-201ENST00000413899 VAV1P15498 845 aa5.86□□□□□ -1.47
HMGB1P11-201ENST00000413899 NFE2L2Q16236 605 aa5.86□□□□□ -1.47
HMGB1P11-201ENST00000413899 CCDC144BQ3MJ40 725 aa5.86□□□□□ -1.47
HMGB1P11-201ENST00000413899 CWF19L1Q69YN2 538 aaKnown RBP5.86□□□□□ -1.47
HMGB1P11-201ENST00000413899 POMZP3Q6PJE2 187 aa5.86□□□□□ -1.47
HMGB1P11-201ENST00000413899 CRTC3Q6UUV7 619 aa5.86□□□□□ -1.47
HMGB1P11-201ENST00000413899 CRACR2BQ8N4Y2 399 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P11-201ENST00000413899 ADCY4Q8NFM4 1077 aa5.86□□□□□ -1.47
HMGB1P11-201ENST00000413899 SGSM3Q96HU1 749 aa5.86□□□□□ -1.47
HMGB1P11-201ENST00000413899 TCFL5Q9UL49 500 aa5.86□□□□□ -1.47
HMGB1P11-201ENST00000413899 FAM221BA6H8Z2 402 aa5.85□□□□□ -1.47
HMGB1P11-201ENST00000413899 IQCA1LA6NCM1 817 aa5.85□□□□□ -1.47
HMGB1P11-201ENST00000413899 NOP56O00567 594 aaKnown RBP5.85□□□□□ -1.47
HMGB1P11-201ENST00000413899 ITGAVP06756 1048 aa5.85□□□□□ -1.47
HMGB1P11-201ENST00000413899 SYPP08247 313 aa5.85□□□□□ -1.47
HMGB1P11-201ENST00000413899 GP2P55259 537 aaKnown RBP5.85□□□□□ -1.47
HMGB1P11-201ENST00000413899 POU4F1Q01851 419 aa5.85□□□□□ -1.47
HMGB1P11-201ENST00000413899 SV2CQ496J9 727 aa5.85□□□□□ -1.47
HMGB1P11-201ENST00000413899 DPH6Q7L8W6 267 aa5.85□□□□□ -1.47
HMGB1P11-201ENST00000413899 ZNF227Q86WZ6 799 aa5.85□□□□□ -1.47
HMGB1P11-201ENST00000413899 TRIM59Q8IWR1 403 aa5.85□□□□□ -1.47
HMGB1P11-201ENST00000413899 TP53INP2Q8IXH6 220 aa5.85□□□□□ -1.47
HMGB1P11-201ENST00000413899 CCDC120Q96HB5 630 aa5.85□□□□□ -1.47
HMGB1P11-201ENST00000413899 ZDHHC15Q96MV8 337 aa5.85□□□□□ -1.47
HMGB1P11-201ENST00000413899 SLC12A9Q9BXP2 914 aa5.85□□□□□ -1.47
HMGB1P11-201ENST00000413899 FOXP3Q9BZS1 431 aa5.85□□□□□ -1.47
HMGB1P11-201ENST00000413899 CDK11AQ9UQ88 783 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P11-201ENST00000413899 AKT3Q9Y243 479 aa5.85□□□□□ -1.47
HMGB1P11-201ENST00000413899 SUGT1Q9Y2Z0 365 aa5.85□□□□□ -1.47
HMGB1P11-201ENST00000413899 A0A1W2PQU0 124 aa5.84□□□□□ -1.47
HMGB1P11-201ENST00000413899 TMEM82A0PJX8 343 aa5.84□□□□□ -1.47
HMGB1P11-201ENST00000413899 AGRPO00253 132 aa5.84□□□□□ -1.47
HMGB1P11-201ENST00000413899 MEIS1O00470 390 aa5.84□□□□□ -1.47
HMGB1P11-201ENST00000413899 IGSF3O75054 1194 aa5.84□□□□□ -1.47
HMGB1P11-201ENST00000413899 NOP2P46087 812 aaKnown RBP5.84□□□□□ -1.47
HMGB1P11-201ENST00000413899 PPP2R5DQ14738 602 aa5.84□□□□□ -1.47
HMGB1P11-201ENST00000413899 PLCL1Q15111 1095 aa5.84□□□□□ -1.47
HMGB1P11-201ENST00000413899 RTP2Q5QGT7 225 aa5.84□□□□□ -1.47
HMGB1P11-201ENST00000413899 Q8N3U1 123 aa5.84□□□□□ -1.47
HMGB1P11-201ENST00000413899 LRRN4CLQ8ND94 238 aa5.84□□□□□ -1.47
HMGB1P11-201ENST00000413899 PI4K2BQ8TCG2 481 aa5.84□□□□□ -1.47
HMGB1P11-201ENST00000413899 ALPK1Q96QP1 1244 aa5.84□□□□□ -1.47
HMGB1P11-201ENST00000413899 SRPK1Q96SB4 655 aaKnown RBP5.84□□□□□ -1.47
HMGB1P11-201ENST00000413899 MBNL3Q9NUK0 354 aaKnown RBP5.84□□□□□ -1.47
HMGB1P11-201ENST00000413899 ZMYM5Q9UJ78 669 aa5.84□□□□□ -1.47
HMGB1P11-201ENST00000413899 ADAMTS6Q9UKP5 1117 aa5.84□□□□□ -1.47
HMGB1P11-201ENST00000413899 SSU72P8A0A1W2PR75 194 aa5.83□□□□□ -1.48
HMGB1P11-201ENST00000413899 AURKAO14965 403 aa5.83□□□□□ -1.48
HMGB1P11-201ENST00000413899 AMPD2Q01433 879 aa5.83□□□□□ -1.48
HMGB1P11-201ENST00000413899 MTERF2Q49AM1 385 aa5.83□□□□□ -1.48
HMGB1P11-201ENST00000413899 RCSD1Q6JBY9 416 aa5.83□□□□□ -1.48
HMGB1P11-201ENST00000413899 ABI1Q8IZP0 508 aa5.83□□□□□ -1.48
HMGB1P11-201ENST00000413899 LRRC47Q8N1G4 583 aaKnown RBP5.83□□□□□ -1.48
HMGB1P11-201ENST00000413899 JMYQ8N9B5 988 aa5.83□□□□□ -1.48
HMGB1P11-201ENST00000413899 LINC01599Q8WXQ3 324 aa5.83□□□□□ -1.48
HMGB1P11-201ENST00000413899 G6PC3Q9BUM1 346 aa5.83□□□□□ -1.48
HMGB1P11-201ENST00000413899 ZSWIM4Q9H7M6 989 aa5.83□□□□□ -1.48
HMGB1P11-201ENST00000413899 SLAMF8Q9P0V8 285 aa5.83□□□□□ -1.48
HMGB1P11-201ENST00000413899 LRP2BPQ9P2M1 347 aa5.83□□□□□ -1.48
HMGB1P11-201ENST00000413899 DNAJC25-GNG10A0A024R161 153 aa5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 RNASE1P07998 156 aaKnown RBP5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 ZGLP1P0C6A0 271 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms