RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 HOXA7P31268 230 aaPredicted RBP13.48□□□□□ -0.25
HDAC9-206ENST00000413380 STAT2P52630 851 aa13.48□□□□□ -0.25
HDAC9-206ENST00000413380 GTF2A2P52657 109 aa13.48□□□□□ -0.25
HDAC9-206ENST00000413380 HMGN5P82970 282 aaKnown RBP13.48□□□□□ -0.25
HDAC9-206ENST00000413380 FAM83BQ5T0W9 1011 aa13.48□□□□□ -0.25
HDAC9-206ENST00000413380 FASTKD5Q7L8L6 764 aaKnown RBP13.48□□□□□ -0.25
HDAC9-206ENST00000413380 FAM160B2Q86V87 743 aa13.48□□□□□ -0.25
HDAC9-206ENST00000413380 CCDC144CPQ8IYA2 1237 aa13.48□□□□□ -0.25
HDAC9-206ENST00000413380 RGS22Q8NE09 1264 aa13.48□□□□□ -0.25
HDAC9-206ENST00000413380 TMOD4Q9NZQ9 345 aa13.48□□□□□ -0.25
HDAC9-206ENST00000413380 RBM27Q9P2N5 1060 aaKnown RBP13.48□□□□□ -0.25
HDAC9-206ENST00000413380 FEM1BQ9UK73 627 aa13.48□□□□□ -0.25
HDAC9-206ENST00000413380 SLC45A1Q9Y2W3 748 aa13.48□□□□□ -0.25
HDAC9-206ENST00000413380 HAX1O00165 279 aa13.47□□□□□ -0.25
HDAC9-206ENST00000413380 PRPF3O43395 683 aaKnown RBP13.47□□□□□ -0.25
HDAC9-206ENST00000413380 FMNL1O95466 1100 aaPredicted RBP13.47□□□□□ -0.25
HDAC9-206ENST00000413380 ZYXQ15942 572 aaKnown RBP13.47□□□□□ -0.25
HDAC9-206ENST00000413380 CCDC96Q2M329 555 aa13.47□□□□□ -0.25
HDAC9-206ENST00000413380 KCTD1Q719H9 257 aa13.47□□□□□ -0.25
HDAC9-206ENST00000413380 SPICE1Q8N0Z3 855 aa13.47□□□□□ -0.25
HDAC9-206ENST00000413380 CHURC1Q8WUH1 139 aa13.47□□□□□ -0.25
HDAC9-206ENST00000413380 CCDC102AQ96A19 550 aa13.47□□□□□ -0.25
HDAC9-206ENST00000413380 IPO9Q96P70 1041 aaKnown RBP13.47□□□□□ -0.25
HDAC9-206ENST00000413380 NUP88Q99567 741 aaPredicted RBP13.47□□□□□ -0.25
HDAC9-206ENST00000413380 AGTPBP1Q9UPW5 1226 aa13.47□□□□□ -0.25
HDAC9-206ENST00000413380 FRMPD2Q68DX3 1309 aaPredicted RBP13.46□□□□□ -0.25
HDAC9-206ENST00000413380 RBBP6Q7Z6E9 1792 aaKnown RBP13.46□□□□□ -0.25
HDAC9-206ENST00000413380 PTPDC1A2A3K4 754 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 USP17L15C9J2P7 530 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 USP17L13C9JLJ4 530 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 TMEM232C9JQI7 657 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 USP17L11C9JVI0 530 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 USP17L18D6R9N7 530 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 USP17L22D6RA61 530 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 USP17L17D6RBQ6 530 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 USP17L19D6RCP7 530 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 USP17L20D6RJB6 530 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 GOLGA8HP0CJ92 632 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 FDX1P10109 184 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 CETPP11597 493 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 FDPSP14324 419 aaKnown RBP13.46□□□□□ -0.25
HDAC9-206ENST00000413380 ZNF157P51786 506 aaPredicted RBP13.46□□□□□ -0.25
HDAC9-206ENST00000413380 USP17L24Q0WX57 530 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 DGKZQ13574 1117 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 SYDE2Q5VT97 1194 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 TTBK2Q6IQ55 1244 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 GPAT2Q6NUI2 795 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 LBX2Q6XYB7 198 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 CATSPERGQ6ZRH7 1159 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 FAM177A1Q8N128 213 aaPredicted RBP13.46□□□□□ -0.25
HDAC9-206ENST00000413380 RPAP3Q9H6T3 665 aaPredicted RBP13.46□□□□□ -0.25
HDAC9-206ENST00000413380 ZCCHC17Q9NP64 241 aaKnown RBP13.46□□□□□ -0.25
HDAC9-206ENST00000413380 ADAMTS5Q9UNA0 930 aa13.46□□□□□ -0.25
HDAC9-206ENST00000413380 MANSC4A6NHS7 340 aaPredicted RBP13.45□□□□□ -0.26
HDAC9-206ENST00000413380 JAK2O60674 1132 aa13.45□□□□□ -0.26
HDAC9-206ENST00000413380 DEXIO95424 95 aa13.45□□□□□ -0.26
HDAC9-206ENST00000413380 DDIT3P35638 169 aa13.45□□□□□ -0.26
HDAC9-206ENST00000413380 PKN1Q16512 942 aa13.45□□□□□ -0.26
HDAC9-206ENST00000413380 TRIM22Q8IYM9 498 aa13.45□□□□□ -0.26
HDAC9-206ENST00000413380 ADGRF4Q8IZF3 695 aa13.45□□□□□ -0.26
HDAC9-206ENST00000413380 PRPF38AQ8NAV1 312 aaKnown RBP13.45□□□□□ -0.26
HDAC9-206ENST00000413380 BRI3BPQ8WY22 251 aa13.45□□□□□ -0.26
HDAC9-206ENST00000413380 SLF1Q9BQI6 1058 aa13.45□□□□□ -0.26
HDAC9-206ENST00000413380 RANBP17Q9H2T7 1088 aaKnown RBP13.45□□□□□ -0.26
HDAC9-206ENST00000413380 JMJD4Q9H9V9 463 aa13.45□□□□□ -0.26
HDAC9-206ENST00000413380 GPCPD1Q9NPB8 672 aa13.45□□□□□ -0.26
HDAC9-206ENST00000413380 PPP1R9AQ9ULJ8 1098 aa13.45□□□□□ -0.26
HDAC9-206ENST00000413380 MTMR7Q9Y216 660 aa13.45□□□□□ -0.26
HDAC9-206ENST00000413380 hCG_1984214I3L0E3 225 aa13.44□□□□□ -0.26
HDAC9-206ENST00000413380 INHBEP58166 350 aa13.44□□□□□ -0.26
HDAC9-206ENST00000413380 SSRP1Q08945 709 aaKnown RBP13.44□□□□□ -0.26
HDAC9-206ENST00000413380 PABPC4Q13310 644 aaKnown RBP eCLIP13.44□□□□□ -0.26
HDAC9-206ENST00000413380 TREML2Q5T2D2 321 aa13.44□□□□□ -0.26
HDAC9-206ENST00000413380 ANKRD23Q86SG2 305 aa13.44□□□□□ -0.26
HDAC9-206ENST00000413380 CMTR1Q8N1G2 835 aaKnown RBP13.44□□□□□ -0.26
HDAC9-206ENST00000413380 ZNF713Q8N859 430 aaPredicted RBP13.44□□□□□ -0.26
HDAC9-206ENST00000413380 PHKBQ93100 1093 aa13.44□□□□□ -0.26
HDAC9-206ENST00000413380 UBA5Q9GZZ9 404 aa13.44□□□□□ -0.26
HDAC9-206ENST00000413380 CWC22Q9HCG8 908 aaKnown RBP13.44□□□□□ -0.26
HDAC9-206ENST00000413380 FBXO28Q9NVF7 368 aa13.44□□□□□ -0.26
HDAC9-206ENST00000413380 ORC3Q9UBD5 711 aaPredicted RBP13.44□□□□□ -0.26
HDAC9-206ENST00000413380 PRR12Q9ULL5 1215 aa13.44□□□□□ -0.26
HDAC9-206ENST00000413380 ABT1Q9ULW3 272 aaKnown RBP13.44□□□□□ -0.26
HDAC9-206ENST00000413380 SMC3Q9UQE7 1217 aa13.44□□□□□ -0.26
HDAC9-206ENST00000413380 CCL15-CCL14A0A0B4J2E2 113 aa13.43□□□□□ -0.26
HDAC9-206ENST00000413380 PNMA6FA0A0J9YX94 578 aa13.43□□□□□ -0.26
HDAC9-206ENST00000413380 ATP2A1O14983 1001 aa13.43□□□□□ -0.26
HDAC9-206ENST00000413380 ZBTB5O15062 677 aa13.43□□□□□ -0.26
HDAC9-206ENST00000413380 RAD21O60216 631 aa13.43□□□□□ -0.26
HDAC9-206ENST00000413380 PDIA4P13667 645 aaKnown RBP13.43□□□□□ -0.26
HDAC9-206ENST00000413380 CD44P16070 742 aaKnown RBP13.43□□□□□ -0.26
HDAC9-206ENST00000413380 GJB2P29033 226 aa13.43□□□□□ -0.26
HDAC9-206ENST00000413380 SLC16A2P36021 539 aa13.43□□□□□ -0.26
HDAC9-206ENST00000413380 COG2Q14746 738 aa13.43□□□□□ -0.26
HDAC9-206ENST00000413380 CCL15Q16663 113 aa13.43□□□□□ -0.26
HDAC9-206ENST00000413380 PFKFB3Q16875 520 aaPredicted RBP13.43□□□□□ -0.26
HDAC9-206ENST00000413380 GADL1Q6ZQY3 521 aa13.43□□□□□ -0.26
HDAC9-206ENST00000413380 REPS2Q8NFH8 660 aa13.43□□□□□ -0.26
HDAC9-206ENST00000413380 WASF1Q92558 559 aa13.43□□□□□ -0.26
HDAC9-206ENST00000413380 RRP36Q96EU6 259 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms