RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 ENTPD3O75355 529 aa11.15□□□□□ -0.63
SMPD4-203ENST00000412570 TNFAIP1Q13829 316 aa11.15□□□□□ -0.63
SMPD4-203ENST00000412570 GRM4Q14833 912 aa11.15□□□□□ -0.63
SMPD4-203ENST00000412570 CDC37Q16543 378 aaPredicted RBP11.15□□□□□ -0.63
SMPD4-203ENST00000412570 QRICH1Q2TAL8 776 aa11.15□□□□□ -0.63
SMPD4-203ENST00000412570 ANO1Q5XXA6 986 aa11.15□□□□□ -0.63
SMPD4-203ENST00000412570 GADL1Q6ZQY3 521 aa11.15□□□□□ -0.63
SMPD4-203ENST00000412570 IL17RAQ96F46 866 aa11.15□□□□□ -0.63
SMPD4-203ENST00000412570 JMJD4Q9H9V9 463 aa11.15□□□□□ -0.63
SMPD4-203ENST00000412570 ARHGEF10LQ9HCE6 1279 aa11.15□□□□□ -0.63
SMPD4-203ENST00000412570 RTN4Q9NQC3 1192 aaKnown RBP11.15□□□□□ -0.63
SMPD4-203ENST00000412570 RBM28Q9NW13 759 aaKnown RBP11.15□□□□□ -0.63
SMPD4-203ENST00000412570 NRXN2Q9P2S2 1712 aa11.14□□□□□ -0.63
SMPD4-203ENST00000412570 BMP3P12645 472 aa11.14□□□□□ -0.63
SMPD4-203ENST00000412570 ALAS1P13196 640 aa11.14□□□□□ -0.63
SMPD4-203ENST00000412570 WASF1Q92558 559 aa11.14□□□□□ -0.63
SMPD4-203ENST00000412570 WNK4Q96J92 1243 aa11.14□□□□□ -0.63
SMPD4-203ENST00000412570 GOLPH3LQ9H4A5 285 aa11.14□□□□□ -0.63
SMPD4-203ENST00000412570 RAVER2Q9HCJ3 691 aaKnown RBP11.14□□□□□ -0.63
SMPD4-203ENST00000412570 DOCK2Q92608 1830 aa11.14□□□□□ -0.63
SMPD4-203ENST00000412570 CCNT1O60563 726 aaKnown RBP11.14□□□□□ -0.63
SMPD4-203ENST00000412570 CAP2P40123 477 aa11.14□□□□□ -0.63
SMPD4-203ENST00000412570 AFMP43652 599 aa11.14□□□□□ -0.63
SMPD4-203ENST00000412570 HDLBPQ00341 1268 aaKnown RBP11.14□□□□□ -0.63
SMPD4-203ENST00000412570 NSMFQ6X4W1 530 aa11.14□□□□□ -0.63
SMPD4-203ENST00000412570 CFAP45Q9UL16 551 aa11.14□□□□□ -0.63
SMPD4-203ENST00000412570 MYH1P12882 1939 aa11.14□□□□□ -0.63
SMPD4-203ENST00000412570 ZNF543Q08ER8 600 aa11.14□□□□□ -0.63
SMPD4-203ENST00000412570 CCDC73Q6ZRK6 1079 aa11.14□□□□□ -0.63
SMPD4-203ENST00000412570 AGBL1Q96MI9 1066 aa11.14□□□□□ -0.63
SMPD4-203ENST00000412570 RNF26Q9BY78 433 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-203ENST00000412570 PPP1R11O60927 126 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-203ENST00000412570 EVCP57679 992 aa11.13□□□□□ -0.63
SMPD4-203ENST00000412570 FUT2Q10981 343 aa11.13□□□□□ -0.63
SMPD4-203ENST00000412570 GOLGA6L3A6NEY3 463 aa11.13□□□□□ -0.63
SMPD4-203ENST00000412570 DDX39AO00148 427 aaKnown RBP11.13□□□□□ -0.63
SMPD4-203ENST00000412570 PRPF3O43395 683 aaKnown RBP11.13□□□□□ -0.63
SMPD4-203ENST00000412570 FGRP09769 529 aa11.13□□□□□ -0.63
SMPD4-203ENST00000412570 CERS3Q8IU89 383 aa11.13□□□□□ -0.63
SMPD4-203ENST00000412570 BLIDQ8IZY5 108 aa11.13□□□□□ -0.63
SMPD4-203ENST00000412570 EPSTI1Q96J88 318 aa11.13□□□□□ -0.63
SMPD4-203ENST00000412570 ZSCAN16Q9H4T2 348 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-203ENST00000412570 RTEL1Q9NZ71 1219 aa11.13□□□□□ -0.63
SMPD4-203ENST00000412570 TOB1P50616 345 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-203ENST00000412570 NDUFA8P51970 172 aa11.13□□□□□ -0.63
SMPD4-203ENST00000412570 CCDC17Q96LX7 622 aa11.13□□□□□ -0.63
SMPD4-203ENST00000412570 TNMDQ9H2S6 317 aa11.13□□□□□ -0.63
SMPD4-203ENST00000412570 DNAH12Q6ZR08 3092 aa11.12□□□□□ -0.63
SMPD4-203ENST00000412570 PALM3A6NDB9 673 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-203ENST00000412570 FOXN1O15353 648 aa11.12□□□□□ -0.63
SMPD4-203ENST00000412570 SSBP05455 408 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMPD4-203ENST00000412570 TXKP42681 527 aa11.12□□□□□ -0.63
SMPD4-203ENST00000412570 RAD51AP2Q09MP3 1159 aa11.12□□□□□ -0.63
SMPD4-203ENST00000412570 PFKFB3Q16875 520 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-203ENST00000412570 TICAM2Q86XR7 235 aa11.12□□□□□ -0.63
SMPD4-203ENST00000412570 TEPSINQ96N21 525 aa11.12□□□□□ -0.63
SMPD4-203ENST00000412570 SCAND2PQ9GZW5 306 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-203ENST00000412570 CHMP2AO43633 222 aa11.12□□□□□ -0.63
SMPD4-203ENST00000412570 PRKCSHP14314 528 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-203ENST00000412570 PTGDRQ13258 359 aa11.12□□□□□ -0.63
SMPD4-203ENST00000412570 DHX58Q96C10 678 aa11.12□□□□□ -0.63
SMPD4-203ENST00000412570 EEF2KMTQ96G04 330 aa11.12□□□□□ -0.63
SMPD4-203ENST00000412570 CALML3P27482 149 aa11.11□□□□□ -0.63
SMPD4-203ENST00000412570 CHMP4BP1P59074 171 aa11.11□□□□□ -0.63
SMPD4-203ENST00000412570 UBE2HP62256 183 aa11.11□□□□□ -0.63
SMPD4-203ENST00000412570 PTPN21Q16825 1174 aa11.11□□□□□ -0.63
SMPD4-203ENST00000412570 GRIPAP1Q4V328 841 aa11.11□□□□□ -0.63
SMPD4-203ENST00000412570 BMP2KQ9NSY1 1161 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-203ENST00000412570 WDR19Q8NEZ3 1342 aa11.11□□□□□ -0.63
SMPD4-203ENST00000412570 TDP2O95551 362 aa11.11□□□□□ -0.63
SMPD4-203ENST00000412570 PCP11498 1178 aaKnown RBP11.11□□□□□ -0.63
SMPD4-203ENST00000412570 KLHL40Q2TBA0 621 aa11.11□□□□□ -0.63
SMPD4-203ENST00000412570 TTC38Q5R3I4 469 aa11.11□□□□□ -0.63
SMPD4-203ENST00000412570 TBCKQ8TEA7 893 aa11.11□□□□□ -0.63
SMPD4-203ENST00000412570 DPF2Q92785 391 aa11.11□□□□□ -0.63
SMPD4-203ENST00000412570 PRR12Q9ULL5 1215 aa11.11□□□□□ -0.63
SMPD4-203ENST00000412570 POLR2AP24928 1970 aaKnown RBP11.11□□□□□ -0.63
SMPD4-203ENST00000412570 KINO60870 393 aaKnown RBP11.11□□□□□ -0.63
SMPD4-203ENST00000412570 ASNSP08243 561 aa11.11□□□□□ -0.63
SMPD4-203ENST00000412570 ZNF76P36508 570 aa11.11□□□□□ -0.63
SMPD4-203ENST00000412570 STAT2P52630 851 aa11.11□□□□□ -0.63
SMPD4-203ENST00000412570 EEPD1Q7L9B9 569 aa11.11□□□□□ -0.63
SMPD4-203ENST00000412570 RPAP3Q9H6T3 665 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-203ENST00000412570 PSTPIP2Q9H939 334 aa11.11□□□□□ -0.63
SMPD4-203ENST00000412570 STXBP3O00186 592 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 GNAQP50148 359 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 TATDN1Q6P1N9 297 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 LINC00301Q8NCQ3 95 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 SH2D3AQ9BRG2 576 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 NUP62CLQ9H1M0 184 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 ADARB2Q9NS39 739 aaKnown RBP11.1□□□□□ -0.63
SMPD4-203ENST00000412570 HERC5Q9UII4 1024 aaKnown RBP11.1□□□□□ -0.63
SMPD4-203ENST00000412570 LRRC37AA6NMS7 1700 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 PPP1R12BO60237 982 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-203ENST00000412570 RPS12P25398 132 aaKnown RBP11.1□□□□□ -0.63
SMPD4-203ENST00000412570 VGLL4Q14135 290 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 SYDE2Q5VT97 1194 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 REXO1Q8N1G1 1221 aaKnown RBP11.1□□□□□ -0.63
SMPD4-203ENST00000412570 MAPK8IP1Q9UQF2 711 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 POLR2DO15514 142 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms