RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 OXR1Q8N573 874 aa6.65□□□□□ -1.35
PMS1-203ENST00000409593 LINC00116Q8NCU8 138 aa6.65□□□□□ -1.35
PMS1-203ENST00000409593 PDZD8Q8NEN9 1154 aa6.65□□□□□ -1.35
PMS1-203ENST00000409593 ABHD4Q8TB40 342 aa6.65□□□□□ -1.35
PMS1-203ENST00000409593 MYLIPQ8WY64 445 aa6.65□□□□□ -1.35
PMS1-203ENST00000409593 HAUS7Q99871 368 aa6.65□□□□□ -1.35
PMS1-203ENST00000409593 KRTAP4-2Q9BYR5 136 aa6.65□□□□□ -1.35
PMS1-203ENST00000409593 PRR13Q9NZ81 148 aa6.65□□□□□ -1.35
PMS1-203ENST00000409593 ZNF451Q9Y4E5 1061 aa6.65□□□□□ -1.35
PMS1-203ENST00000409593 SMAD7O15105 426 aaKnown RBP6.64□□□□□ -1.35
PMS1-203ENST00000409593 CBFA2T2O43439 604 aa6.64□□□□□ -1.35
PMS1-203ENST00000409593 TRHRP34981 398 aaPredicted RBP6.64□□□□□ -1.35
PMS1-203ENST00000409593 CASP7P55210 303 aa6.64□□□□□ -1.35
PMS1-203ENST00000409593 CWF19L1Q69YN2 538 aaKnown RBP6.64□□□□□ -1.35
PMS1-203ENST00000409593 HEATR6Q6AI08 1181 aaKnown RBP6.64□□□□□ -1.35
PMS1-203ENST00000409593 VHLLQ6RSH7 139 aa6.64□□□□□ -1.35
PMS1-203ENST00000409593 ZPBP2Q6X784 338 aa6.64□□□□□ -1.35
PMS1-203ENST00000409593 ADCY4Q8NFM4 1077 aa6.64□□□□□ -1.35
PMS1-203ENST00000409593 CDADC1Q9BWV3 514 aa6.64□□□□□ -1.35
PMS1-203ENST00000409593 NOL6Q9H6R4 1146 aaKnown RBP6.64□□□□□ -1.35
PMS1-203ENST00000409593 C19orf44Q9H6X5 657 aa6.64□□□□□ -1.35
PMS1-203ENST00000409593 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.64□□□□□ -1.35
PMS1-203ENST00000409593 H0Y8X5 98 aa6.63□□□□□ -1.35
PMS1-203ENST00000409593 HPXP02790 462 aa6.63□□□□□ -1.35
PMS1-203ENST00000409593 FGRP09769 529 aa6.63□□□□□ -1.35
PMS1-203ENST00000409593 BMP8BP34820 402 aa6.63□□□□□ -1.35
PMS1-203ENST00000409593 ZNF445P59923 1031 aa6.63□□□□□ -1.35
PMS1-203ENST00000409593 ANKRD39Q53RE8 183 aa6.63□□□□□ -1.35
PMS1-203ENST00000409593 TMEM67Q5HYA8 995 aa6.63□□□□□ -1.35
PMS1-203ENST00000409593 LARP1BQ659C4 914 aaKnown RBP6.63□□□□□ -1.35
PMS1-203ENST00000409593 KIAA1211LQ6NV74 962 aa6.63□□□□□ -1.35
PMS1-203ENST00000409593 ADAT2Q7Z6V5 191 aaKnown RBP6.63□□□□□ -1.35
PMS1-203ENST00000409593 FIBCD1Q8N539 461 aa6.63□□□□□ -1.35
PMS1-203ENST00000409593 GBP3Q9H0R5 595 aa6.63□□□□□ -1.35
PMS1-203ENST00000409593 TMEM82A0PJX8 343 aa6.62□□□□□ -1.35
PMS1-203ENST00000409593 FITM1A5D6W6 292 aa6.62□□□□□ -1.35
PMS1-203ENST00000409593 USP2O75604 605 aaPredicted RBP6.62□□□□□ -1.35
PMS1-203ENST00000409593 GSNP06396 782 aa6.62□□□□□ -1.35
PMS1-203ENST00000409593 EPHX1P07099 455 aa6.62□□□□□ -1.35
PMS1-203ENST00000409593 GLI1P08151 1106 aa6.62□□□□□ -1.35
PMS1-203ENST00000409593 PPP2R5DQ14738 602 aa6.62□□□□□ -1.35
PMS1-203ENST00000409593 MPZL3Q6UWV2 235 aa6.62□□□□□ -1.35
PMS1-203ENST00000409593 ANKS4BQ8N8V4 417 aa6.62□□□□□ -1.35
PMS1-203ENST00000409593 KLHL6Q8WZ60 621 aa6.62□□□□□ -1.35
PMS1-203ENST00000409593 FGD4Q96M96 766 aa6.62□□□□□ -1.35
PMS1-203ENST00000409593 ZDHHC15Q96MV8 337 aa6.62□□□□□ -1.35
PMS1-203ENST00000409593 ACTR10Q9NZ32 417 aa6.62□□□□□ -1.35
PMS1-203ENST00000409593 EBF1Q9UH73 591 aa6.62□□□□□ -1.35
PMS1-203ENST00000409593 FHOD1Q9Y613 1164 aa6.62□□□□□ -1.35
PMS1-203ENST00000409593 ETFBP38117 255 aa6.61□□□□□ -1.35
PMS1-203ENST00000409593 ZC3H6P61129 1189 aaKnown RBP6.61□□□□□ -1.35
PMS1-203ENST00000409593 CHRNEQ04844 493 aa6.61□□□□□ -1.35
PMS1-203ENST00000409593 TNNI3KQ59H18 835 aa6.61□□□□□ -1.35
PMS1-203ENST00000409593 MCF2L2Q86YR7 1114 aa6.61□□□□□ -1.35
PMS1-203ENST00000409593 LIN37Q96GY3 246 aaPredicted RBP6.61□□□□□ -1.35
PMS1-203ENST00000409593 MAP6Q96JE9 813 aa6.61□□□□□ -1.35
PMS1-203ENST00000409593 KLHL25Q9H0H3 589 aa6.61□□□□□ -1.35
PMS1-203ENST00000409593 ZNF408Q9H9D4 720 aa6.61□□□□□ -1.35
PMS1-203ENST00000409593 WHRNQ9P202 907 aa6.61□□□□□ -1.35
PMS1-203ENST00000409593 SUGT1Q9Y2Z0 365 aa6.61□□□□□ -1.35
PMS1-203ENST00000409593 ZNF205O95201 554 aa6.61□□□□□ -1.35
PMS1-203ENST00000409593 VAV1P15498 845 aa6.61□□□□□ -1.35
PMS1-203ENST00000409593 TIGD5Q53EQ6 642 aa6.61□□□□□ -1.35
PMS1-203ENST00000409593 SPPL2CQ8IUH8 684 aa6.61□□□□□ -1.35
PMS1-203ENST00000409593 FCRL2Q96LA5 508 aaPredicted RBP6.61□□□□□ -1.35
PMS1-203ENST00000409593 G6PC3Q9BUM1 346 aa6.61□□□□□ -1.35
PMS1-203ENST00000409593 AP5S1Q9NUS5 200 aa6.61□□□□□ -1.35
PMS1-203ENST00000409593 GPR160Q9UJ42 338 aa6.61□□□□□ -1.35
PMS1-203ENST00000409593 SF3B6Q9Y3B4 125 aaKnown RBP6.61□□□□□ -1.35
PMS1-203ENST00000409593 ZNF503-AS2A6NEH8 195 aa6.6□□□□□ -1.35
PMS1-203ENST00000409593 LRRC10BA6NIK2 292 aa6.6□□□□□ -1.35
PMS1-203ENST00000409593 CD3EP07766 207 aa6.6□□□□□ -1.35
PMS1-203ENST00000409593 GSTM1P09488 218 aa6.6□□□□□ -1.35
PMS1-203ENST00000409593 ENDOUP21128 410 aaKnown RBP6.6□□□□□ -1.35
PMS1-203ENST00000409593 SLC14A2Q15849 920 aa6.6□□□□□ -1.35
PMS1-203ENST00000409593 NAALADL2Q58DX5 795 aa6.6□□□□□ -1.35
PMS1-203ENST00000409593 OGFOD2Q6N063 350 aa6.6□□□□□ -1.35
PMS1-203ENST00000409593 CEP128Q6ZU80 1094 aa6.6□□□□□ -1.35
PMS1-203ENST00000409593 LILRA2Q8N149 483 aa6.6□□□□□ -1.35
PMS1-203ENST00000409593 NAT16Q8N8M0 369 aa6.6□□□□□ -1.35
PMS1-203ENST00000409593 LINC01599Q8WXQ3 324 aa6.6□□□□□ -1.35
PMS1-203ENST00000409593 FMNL2Q96PY5 1086 aa6.6□□□□□ -1.35
PMS1-203ENST00000409593 RNF32Q9H0A6 362 aa6.6□□□□□ -1.35
PMS1-203ENST00000409593 PRKAG3Q9UGI9 489 aa6.6□□□□□ -1.35
PMS1-203ENST00000409593 ZNF281Q9Y2X9 895 aa6.6□□□□□ -1.35
PMS1-203ENST00000409593 PPM1BO75688 479 aa6.59□□□□□ -1.35
PMS1-203ENST00000409593 MLANAQ16655 118 aa6.59□□□□□ -1.35
PMS1-203ENST00000409593 C6orf15Q6UXA7 325 aaPredicted RBP6.59□□□□□ -1.35
PMS1-203ENST00000409593 SLC43A3Q8NBI5 491 aa6.59□□□□□ -1.35
PMS1-203ENST00000409593 PPP1R14AQ96A00 147 aa6.59□□□□□ -1.35
PMS1-203ENST00000409593 HHIPL1Q96JK4 782 aa6.59□□□□□ -1.35
PMS1-203ENST00000409593 GPR55Q9Y2T6 319 aaPredicted RBP6.59□□□□□ -1.35
PMS1-203ENST00000409593 R3HCC1Q9Y3T6 440 aaKnown RBP6.59□□□□□ -1.35
PMS1-203ENST00000409593 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.58□□□□□ -1.36
PMS1-203ENST00000409593 TXKP42681 527 aa6.58□□□□□ -1.36
PMS1-203ENST00000409593 GALK1P51570 392 aa6.58□□□□□ -1.36
PMS1-203ENST00000409593 POU4F1Q01851 419 aa6.58□□□□□ -1.36
PMS1-203ENST00000409593 SLC12A9Q9BXP2 914 aa6.58□□□□□ -1.36
PMS1-203ENST00000409593 SP110Q9HB58 689 aa6.58□□□□□ -1.36
PMS1-203ENST00000409593 ERVK13-1Q9NX77 482 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms