RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 OTUD5Q96G74 571 aa19.47■□□□□ 0.71
SSB-202ENST00000409333 RBM27Q9P2N5 1060 aaKnown RBP19.47■□□□□ 0.71
SSB-202ENST00000409333 SPDYE5A6NIY4 337 aa19.46■□□□□ 0.71
SSB-202ENST00000409333 WDR46O15213 610 aaKnown RBP19.46■□□□□ 0.71
SSB-202ENST00000409333 VCAM1P19320 739 aa19.46■□□□□ 0.71
SSB-202ENST00000409333 IKQ13123 557 aaPredicted RBP19.46■□□□□ 0.71
SSB-202ENST00000409333 CST9Q5W186 159 aa19.46■□□□□ 0.71
SSB-202ENST00000409333 KRT40Q6A162 431 aa19.46■□□□□ 0.71
SSB-202ENST00000409333 ERO1BQ86YB8 467 aa19.46■□□□□ 0.71
SSB-202ENST00000409333 GPKOWQ92917 476 aaPredicted RBP eCLIP19.46■□□□□ 0.717e-14■□□□□ 10.6
SSB-202ENST00000409333 TNPO1Q92973 898 aaKnown RBP19.46■□□□□ 0.71
SSB-202ENST00000409333 VPS54Q9P1Q0 977 aa19.46■□□□□ 0.71
SSB-202ENST00000409333 F13A1P00488 732 aa19.45■□□□□ 0.7
SSB-202ENST00000409333 STAT2P52630 851 aa19.45■□□□□ 0.7
SSB-202ENST00000409333 FKBP1BP68106 108 aa19.45■□□□□ 0.7
SSB-202ENST00000409333 PPATQ06203 517 aa19.45■□□□□ 0.7
SSB-202ENST00000409333 BTNL9Q6UXG8 535 aa19.45■□□□□ 0.7
SSB-202ENST00000409333 FERMT3Q86UX7 667 aa19.45■□□□□ 0.7
SSB-202ENST00000409333 C19orf81C9J6K1 198 aa19.44■□□□□ 0.7
SSB-202ENST00000409333 IRF6O14896 467 aa19.44■□□□□ 0.7
SSB-202ENST00000409333 PDIA4P13667 645 aaKnown RBP19.44■□□□□ 0.7
SSB-202ENST00000409333 SYDE2Q5VT97 1194 aa19.44■□□□□ 0.7
SSB-202ENST00000409333 WWC2Q6AWC2 1192 aa19.44■□□□□ 0.7
SSB-202ENST00000409333 OPTNQ96CV9 577 aa19.44■□□□□ 0.7
SSB-202ENST00000409333 MTMR8Q96EF0 704 aa19.44■□□□□ 0.7
SSB-202ENST00000409333 FBXO28Q9NVF7 368 aa19.44■□□□□ 0.7
SSB-202ENST00000409333 SEC63Q9UGP8 760 aaKnown RBP19.44■□□□□ 0.7
SSB-202ENST00000409333 KCNJ14Q9UNX9 436 aa19.44■□□□□ 0.7
SSB-202ENST00000409333 TRIM29Q14134 588 aa19.44■□□□□ 0.7
SSB-202ENST00000409333 HEATR3Q7Z4Q2 680 aa19.44■□□□□ 0.7
SSB-202ENST00000409333 C2orf69Q8N8R5 385 aa19.44■□□□□ 0.7
SSB-202ENST00000409333 C12orf42Q96LP6 360 aa19.44■□□□□ 0.7
SSB-202ENST00000409333 RPAP3Q9H6T3 665 aaPredicted RBP19.44■□□□□ 0.7
SSB-202ENST00000409333 PRR12Q9ULL5 1215 aa19.44■□□□□ 0.7
SSB-202ENST00000409333 SNAP25P60880 206 aa19.43■□□□□ 0.7
SSB-202ENST00000409333 PPIL2Q13356 520 aa19.43■□□□□ 0.7
SSB-202ENST00000409333 TYW1BQ6NUM6 668 aa19.43■□□□□ 0.7
SSB-202ENST00000409333 TANGO6Q9C0B7 1094 aa19.43■□□□□ 0.7
SSB-202ENST00000409333 ZBTB5O15062 677 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 PPP1R11O60927 126 aaPredicted RBP19.42■□□□□ 0.7
SSB-202ENST00000409333 GJA5P36382 358 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 CDC37Q16543 378 aaPredicted RBP19.42■□□□□ 0.7
SSB-202ENST00000409333 SH3D19Q5HYK7 790 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 MCTP1Q6DN14 999 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 RBM46Q8TBY0 533 aaKnown RBP19.42■□□□□ 0.7
SSB-202ENST00000409333 KIFC2Q96AC6 838 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 CHAMP1Q96JM3 812 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 TMOD4Q9NZQ9 345 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 FEM1BQ9UK73 627 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 PASKQ96RG2 1323 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 PNMA6FA0A0J9YX94 578 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 UNCXA6NJT0 531 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 STXBP3O00186 592 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 PLA2G6O60733 806 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 MMP1P03956 469 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 XBP1P17861 261 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 QRICH1Q2TAL8 776 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 SAMD1Q6SPF0 538 aaPredicted RBP19.42■□□□□ 0.7
SSB-202ENST00000409333 RGS22Q8NE09 1264 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 CHURC1Q8WUH1 139 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 SLC10A4Q96EP9 437 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 PHF20Q9BVI0 1012 aa19.42■□□□□ 0.7
SSB-202ENST00000409333 RBBP6Q7Z6E9 1792 aaKnown RBP19.41■□□□□ 0.7
SSB-202ENST00000409333 KIF28PB7ZC32 967 aa19.41■□□□□ 0.7
SSB-202ENST00000409333 RESTQ13127 1097 aa19.41■□□□□ 0.7
SSB-202ENST00000409333 FOXD4L6Q3SYB3 417 aaPredicted RBP19.41■□□□□ 0.7
SSB-202ENST00000409333 FOXD4L3Q6VB84 417 aaPredicted RBP19.41■□□□□ 0.7
SSB-202ENST00000409333 FAM160B2Q86V87 743 aa19.41■□□□□ 0.7
SSB-202ENST00000409333 BARHL2Q9NY43 387 aa19.41■□□□□ 0.7
SSB-202ENST00000409333 KCNH4Q9UQ05 1017 aa19.41■□□□□ 0.7
SSB-202ENST00000409333 A0A0G2JMZ2 1700 aa19.41■□□□□ 0.7
SSB-202ENST00000409333 A0A0G2JLL6 359 aaPredicted RBP19.4■□□□□ 0.7
SSB-202ENST00000409333 FLOT1O75955 427 aa19.4■□□□□ 0.7
SSB-202ENST00000409333 KIF23Q02241 960 aaPredicted RBP19.4■□□□□ 0.7
SSB-202ENST00000409333 PRRT2Q7Z6L0 340 aaPredicted RBP19.4■□□□□ 0.7
SSB-202ENST00000409333 SMC1BQ8NDV3 1235 aa19.4■□□□□ 0.7
SSB-202ENST00000409333 COA7Q96BR5 231 aa19.4■□□□□ 0.7
SSB-202ENST00000409333 SLF1Q9BQI6 1058 aa19.4■□□□□ 0.7
SSB-202ENST00000409333 CXCL11O14625 94 aa19.39■□□□□ 0.7
SSB-202ENST00000409333 NPY5RQ15761 445 aa19.39■□□□□ 0.7
SSB-202ENST00000409333 TREML2Q5T2D2 321 aa19.39■□□□□ 0.7
SSB-202ENST00000409333 FAM173BQ6P4H8 233 aa19.39■□□□□ 0.7
SSB-202ENST00000409333 SH3GLB2Q9NR46 395 aa19.39■□□□□ 0.7
SSB-202ENST00000409333 NAPAP54920 295 aa19.39■□□□□ 0.69
SSB-202ENST00000409333 DIS3L2Q8IYB7 885 aaKnown RBP19.39■□□□□ 0.69
SSB-202ENST00000409333 OXER1Q8TDS5 423 aa19.39■□□□□ 0.69
SSB-202ENST00000409333 WNK4Q96J92 1243 aa19.39■□□□□ 0.69
SSB-202ENST00000409333 RANBP17Q9H2T7 1088 aaKnown RBP19.39■□□□□ 0.69
SSB-202ENST00000409333 hCG_1984214I3L0E3 225 aa19.38■□□□□ 0.69
SSB-202ENST00000409333 ADAMTS3O15072 1205 aa19.38■□□□□ 0.69
SSB-202ENST00000409333 TAL1P17542 331 aaPredicted RBP19.38■□□□□ 0.69
SSB-202ENST00000409333 YY1P25490 414 aa19.38■□□□□ 0.69
SSB-202ENST00000409333 HUNKP57058 714 aa19.38■□□□□ 0.69
SSB-202ENST00000409333 NLRP5P59047 1200 aa19.38■□□□□ 0.69
SSB-202ENST00000409333 GADL1Q6ZQY3 521 aa19.38■□□□□ 0.69
SSB-202ENST00000409333 ZNF713Q8N859 430 aaPredicted RBP19.38■□□□□ 0.69
SSB-202ENST00000409333 PRPF38AQ8NAV1 312 aaKnown RBP19.38■□□□□ 0.69
SSB-202ENST00000409333 BTBD18B2RXH4 712 aa19.37■□□□□ 0.69
SSB-202ENST00000409333 PROCA1Q8NCQ7 364 aaPredicted RBP19.37■□□□□ 0.69
SSB-202ENST00000409333 CCDC148Q8NFR7 591 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms