RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 PNMA2Q9UL42 364 aa15.11■□□□□ 0.01
AFF3-202ENST00000409236 TRIM33Q9UPN9 1127 aa15.11■□□□□ 0.01
AFF3-202ENST00000409236 USTQ9Y2C2 406 aa15.11■□□□□ 0.01
AFF3-202ENST00000409236 TBC1D23Q9NUY8 699 aa15.11■□□□□ 0.01
AFF3-202ENST00000409236 BZW2Q9Y6E2 419 aaKnown RBP15.11■□□□□ 0.01
AFF3-202ENST00000409236 TIAM1Q13009 1591 aa15.11■□□□□ 0.01
AFF3-202ENST00000409236 ZNF445P59923 1031 aa15.11■□□□□ 0.01
AFF3-202ENST00000409236 AP2B1P63010 937 aa15.11■□□□□ 0.01
AFF3-202ENST00000409236 CHMP6Q96FZ7 201 aa15.11■□□□□ 0.01
AFF3-202ENST00000409236 VPS16Q9H269 839 aa15.11■□□□□ 0.01
AFF3-202ENST00000409236 PRDM11Q9NQV5 511 aa15.11■□□□□ 0.01
AFF3-202ENST00000409236 DCDC2Q9UHG0 476 aa15.11■□□□□ 0.01
AFF3-202ENST00000409236 TADA3O75528 432 aa15.11■□□□□ 0.01
AFF3-202ENST00000409236 MMEP08473 750 aa15.11■□□□□ 0.01
AFF3-202ENST00000409236 ATP11BQ9Y2G3 1177 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 GSNP06396 782 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 HELLSQ9NRZ9 838 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 STRIP2Q9ULQ0 834 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 IFNB1P01574 187 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 CERS3Q8IU89 383 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 NAF1Q96HR8 494 aaKnown RBP15.1■□□□□ 0.01
AFF3-202ENST00000409236 NDE1Q9NXR1 346 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 STX18Q9P2W9 335 aaKnown RBP15.1■□□□□ 0.01
AFF3-202ENST00000409236 MAP3K2Q9Y2U5 619 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 KCNK3O14649 394 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 HADHQ16836 314 aaKnown RBP15.1■□□□□ 0.01
AFF3-202ENST00000409236 NBPF20Q3BBV1 942 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 C2CD5Q86YS7 1000 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 MRPL44Q9H9J2 332 aaKnown RBP15.1■□□□□ 0.01
AFF3-202ENST00000409236 DNAJC17Q9NVM6 304 aaKnown RBP15.1■□□□□ 0.01
AFF3-202ENST00000409236 MPP6Q9NZW5 540 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.1■□□□□ 0.01
AFF3-202ENST00000409236 SEPT3Q9UH03 358 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 KDM3AQ9Y4C1 1321 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 H0Y626 953 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 NBNO60934 754 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 TRIM16O95361 564 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 XRCC5P13010 732 aaKnown RBP15.1■□□□□ 0.01
AFF3-202ENST00000409236 E2F5Q15329 346 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 NELFBQ8WX92 580 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 IRAK4Q9NWZ3 460 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 CHCHD3Q9NX63 227 aaKnown RBP15.1■□□□□ 0.01
AFF3-202ENST00000409236 S100A5P33763 92 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 EIF3BP55884 814 aaKnown RBP15.1■□□□□ 0.01
AFF3-202ENST00000409236 BRDTQ58F21 947 aaPredicted RBP15.1■□□□□ 0.01
AFF3-202ENST00000409236 RAPH1Q70E73 1250 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 SNX29Q8TEQ0 813 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 ZFYVE1Q9HBF4 777 aa15.1■□□□□ 0.01
AFF3-202ENST00000409236 RASSF10A6NK89 507 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 PLEKHM3Q6ZWE6 761 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 HACE1Q8IYU2 909 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 PAG1Q9NWQ8 432 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 MID2Q9UJV3 735 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 FAM95CA0A1B0GW59 222 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 POLR2DO15514 142 aaKnown RBP15.09■□□□□ 0.01
AFF3-202ENST00000409236 TBCCQ15814 346 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 DYDC2Q96IM9 177 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 TMEM60Q9H2L4 133 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 MIS18AQ9NYP9 233 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 KDM2BQ8NHM5 1336 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 CHEK2O96017 543 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 MAGEA1P43355 309 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 APOBRQ0VD83 1088 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 TYW1BQ6NUM6 668 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 PSMB7Q99436 277 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 TRAF7Q6Q0C0 670 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.09■□□□□ 0.01
AFF3-202ENST00000409236 NR1H4Q96RI1 486 aaPredicted RBP15.09■□□□□ 0.01
AFF3-202ENST00000409236 STOML1Q9UBI4 398 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 GOLGA8RI6L899 631 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 SCG2P13521 617 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 PTPDC1A2A3K4 754 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 ZNF263O14978 683 aa15.09■□□□□ 0.01
AFF3-202ENST00000409236 DHX32Q7L7V1 743 aaKnown RBP15.08■□□□□ 0.01
AFF3-202ENST00000409236 HDDC2Q7Z4H3 204 aa15.08■□□□□ 0.01
AFF3-202ENST00000409236 FLCNQ8NFG4 579 aa15.08■□□□□ 0.01
AFF3-202ENST00000409236 LZTS2Q9BRK4 669 aa15.08■□□□□ 0.01
AFF3-202ENST00000409236 ATF7P17544 494 aaPredicted RBP15.08■□□□□ 0.01
AFF3-202ENST00000409236 TMEM132EQ6IEE7 984 aa15.08■□□□□ 0.01
AFF3-202ENST00000409236 PRPF6O94906 941 aaKnown RBP15.08■□□□□ 0
AFF3-202ENST00000409236 DEXIO95424 95 aa15.08■□□□□ 0
AFF3-202ENST00000409236 MED21Q13503 144 aa15.08■□□□□ 0
AFF3-202ENST00000409236 GINS4Q9BRT9 223 aa15.08■□□□□ 0
AFF3-202ENST00000409236 OCM2P0CE71 109 aa15.08■□□□□ 0
AFF3-202ENST00000409236 OCMP0CE72 109 aaPredicted RBP15.08■□□□□ 0
AFF3-202ENST00000409236 ACTN1P12814 892 aa15.08■□□□□ 0
AFF3-202ENST00000409236 POLR2BP30876 1174 aaKnown RBP15.08■□□□□ 0
AFF3-202ENST00000409236 STAT1P42224 750 aa15.08■□□□□ 0
AFF3-202ENST00000409236 RARS2Q5T160 578 aaKnown RBP15.08■□□□□ 0
AFF3-202ENST00000409236 HORMAD1Q86X24 394 aa15.08■□□□□ 0
AFF3-202ENST00000409236 FAM96AQ9H5X1 160 aa15.08■□□□□ 0
AFF3-202ENST00000409236 ZMYND8Q9ULU4 1186 aaPredicted RBP15.08■□□□□ 0
AFF3-202ENST00000409236 CTNND1O60716 968 aaKnown RBP15.08■□□□□ 0
AFF3-202ENST00000409236 STAT2P52630 851 aa15.08■□□□□ 0
AFF3-202ENST00000409236 CAPRIN2Q6IMN6 1127 aaKnown RBP15.08■□□□□ 0
AFF3-202ENST00000409236 PPP1R2P3Q6NXS1 205 aa15.08■□□□□ 0
AFF3-202ENST00000409236 MAGEB6P1A0A0J9YX57 407 aa15.08■□□□□ 0
AFF3-202ENST00000409236 TMEM191CA6NGB0 347 aa15.08■□□□□ 0
AFF3-202ENST00000409236 TMEM191BP0C7N4 346 aa15.08■□□□□ 0
AFF3-202ENST00000409236 DEFA1P59665 94 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms