RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 HNRNPLLQ8WVV9 542 aaKnown RBP20.8■□□□□ 0.92
EWSR1-207ENST00000406548 GPKOWQ92917 476 aaPredicted RBP eCLIP20.8■□□□□ 0.925e-7■□□□□ 9.3
EWSR1-207ENST00000406548 KAT14Q9H8E8 782 aa20.8■□□□□ 0.92
EWSR1-207ENST00000406548 DISC1Q9NRI5 854 aa20.8■□□□□ 0.92
EWSR1-207ENST00000406548 MAPK8IP1Q9UQF2 711 aa20.8■□□□□ 0.92
EWSR1-207ENST00000406548 NRAPQ86VF7 1730 aa20.8■□□□□ 0.92
EWSR1-207ENST00000406548 H7C1D1 291 aa20.8■□□□□ 0.92
EWSR1-207ENST00000406548 ABL1P00519 1130 aa20.8■□□□□ 0.92
EWSR1-207ENST00000406548 UBXN1Q04323 297 aa20.8■□□□□ 0.92
EWSR1-207ENST00000406548 RAB21Q9UL25 225 aa20.8■□□□□ 0.92
EWSR1-207ENST00000406548 THRAP3Q9Y2W1 955 aaKnown RBP20.8■□□□□ 0.92
EWSR1-207ENST00000406548 MAP2K7O14733 419 aa20.79■□□□□ 0.92
EWSR1-207ENST00000406548 HIBADHP31937 336 aaKnown RBP20.79■□□□□ 0.92
EWSR1-207ENST00000406548 WHAMMP3Q1A5X7 153 aa20.79■□□□□ 0.92
EWSR1-207ENST00000406548 ADSSL1Q8N142 457 aa20.79■□□□□ 0.92
EWSR1-207ENST00000406548 SLF1Q9BQI6 1058 aa20.79■□□□□ 0.92
EWSR1-207ENST00000406548 USP5P45974 858 aa20.78■□□□□ 0.92
EWSR1-207ENST00000406548 PIP4K2BP78356 416 aa20.78■□□□□ 0.92
EWSR1-207ENST00000406548 TFCP2L1Q9NZI6 479 aa20.78■□□□□ 0.92
EWSR1-207ENST00000406548 CALCOCO1Q9P1Z2 691 aa20.78■□□□□ 0.92
EWSR1-207ENST00000406548 TRIM49BA6NDI0 452 aa20.78■□□□□ 0.92
EWSR1-207ENST00000406548 PARP1P09874 1014 aaKnown RBP20.78■□□□□ 0.92
EWSR1-207ENST00000406548 GTF2E1P29083 439 aaPredicted RBP20.78■□□□□ 0.92
EWSR1-207ENST00000406548 NAALADL2Q58DX5 795 aa20.78■□□□□ 0.92
EWSR1-207ENST00000406548 IRF2BP1Q8IU81 584 aa20.78■□□□□ 0.92
EWSR1-207ENST00000406548 RASGRP4Q8TDF6 673 aa20.78■□□□□ 0.92
EWSR1-207ENST00000406548 SMARCC1Q92922 1105 aaPredicted RBP20.78■□□□□ 0.92
EWSR1-207ENST00000406548 PNKPQ96T60 521 aa20.78■□□□□ 0.92
EWSR1-207ENST00000406548 ZCCHC17Q9NP64 241 aaKnown RBP20.78■□□□□ 0.92
EWSR1-207ENST00000406548 MCM9Q9NXL9 1143 aa20.78■□□□□ 0.92
EWSR1-207ENST00000406548 SLC10A5Q5PT55 438 aa20.77■□□□□ 0.92
EWSR1-207ENST00000406548 TMED8Q6PL24 325 aaPredicted RBP20.77■□□□□ 0.92
EWSR1-207ENST00000406548 DTHD1Q6ZMT9 781 aa20.77■□□□□ 0.92
EWSR1-207ENST00000406548 BICDL1Q6ZP65 573 aa20.77■□□□□ 0.92
EWSR1-207ENST00000406548 PNMA1Q8ND90 353 aa20.77■□□□□ 0.92
EWSR1-207ENST00000406548 CCDC194A0A1B0GVG4 234 aa20.77■□□□□ 0.91
EWSR1-207ENST00000406548 M0R2N6 131 aa20.77■□□□□ 0.91
EWSR1-207ENST00000406548 KCNB1Q14721 858 aa20.77■□□□□ 0.91
EWSR1-207ENST00000406548 BEND6Q5SZJ8 279 aaPredicted RBP20.77■□□□□ 0.91
EWSR1-207ENST00000406548 DGKHQ86XP1 1220 aa20.77■□□□□ 0.91
EWSR1-207ENST00000406548 CTAGE15A4D2H0 777 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 LGALS16A8MUM7 142 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 ERLIN1O75477 346 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 TFRCP02786 760 aaKnown RBP20.76■□□□□ 0.91
EWSR1-207ENST00000406548 CTAGE8P0CG41 777 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 EEF1GP26641 437 aaKnown RBP20.76■□□□□ 0.91
EWSR1-207ENST00000406548 RPS8P62241 208 aaKnown RBP20.76■□□□□ 0.91
EWSR1-207ENST00000406548 ST5P78524 1137 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 TFAP4Q01664 338 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 SLC4A8Q2Y0W8 1093 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 TYW1BQ6NUM6 668 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 CTAGE6Q86UF2 777 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 CTAGE4Q8IX94 777 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 STAG2Q8N3U4 1231 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 MB21D1Q8N884 522 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 RASSF8Q8NHQ8 419 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 CHP1Q99653 195 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 IL17RBQ9NRM6 502 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 A0A1W2PQC6 194 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 NDUFA10O95299 355 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 USP17L8P0C7I0 530 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 GRM4Q14833 912 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 ANKRD2Q9GZV1 360 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 THAP9Q9H5L6 903 aa20.76■□□□□ 0.91
EWSR1-207ENST00000406548 REXO2Q9Y3B8 237 aaKnown RBP20.76■□□□□ 0.91
EWSR1-207ENST00000406548 EPN1Q9Y6I3 576 aaPredicted RBP20.76■□□□□ 0.91
EWSR1-207ENST00000406548 TTC26A0AVF1 554 aa20.75■□□□□ 0.91
EWSR1-207ENST00000406548 PP2D1A8MPX8 630 aa20.75■□□□□ 0.91
EWSR1-207ENST00000406548 MYL1P05976 194 aa20.75■□□□□ 0.91
EWSR1-207ENST00000406548 PMS1P54277 932 aaKnown RBP20.75■□□□□ 0.91
EWSR1-207ENST00000406548 AMPD2Q01433 879 aa20.75■□□□□ 0.91
EWSR1-207ENST00000406548 ZNF831Q5JPB2 1677 aa20.75■□□□□ 0.91
EWSR1-207ENST00000406548 TXLNBQ8N3L3 684 aa20.75■□□□□ 0.91
EWSR1-207ENST00000406548 DAGLBQ8NCG7 672 aa20.75■□□□□ 0.91
EWSR1-207ENST00000406548 LINC00116Q8NCU8 138 aa20.75■□□□□ 0.91
EWSR1-207ENST00000406548 TMEM60Q9H2L4 133 aa20.75■□□□□ 0.91
EWSR1-207ENST00000406548 PCDHA6Q9UN73 950 aa20.75■□□□□ 0.91
EWSR1-207ENST00000406548 PCDHA8Q9Y5H6 950 aa20.75■□□□□ 0.91
EWSR1-207ENST00000406548 MYH1P12882 1939 aa20.75■□□□□ 0.91
EWSR1-207ENST00000406548 H3BQF6 201 aa20.74■□□□□ 0.91
EWSR1-207ENST00000406548 KLRC4O43908 158 aa20.74■□□□□ 0.91
EWSR1-207ENST00000406548 NT5C2P49902 561 aa20.74■□□□□ 0.91
EWSR1-207ENST00000406548 GPS2Q13227 327 aa20.74■□□□□ 0.91
EWSR1-207ENST00000406548 STIM1Q13586 685 aa20.74■□□□□ 0.91
EWSR1-207ENST00000406548 TBC1D9BQ66K14 1250 aa20.74■□□□□ 0.91
EWSR1-207ENST00000406548 HDXQ7Z353 690 aa20.74■□□□□ 0.91
EWSR1-207ENST00000406548 DZIP1Q86YF9 867 aaKnown RBP20.74■□□□□ 0.91
EWSR1-207ENST00000406548 CCDC148Q8NFR7 591 aa20.74■□□□□ 0.91
EWSR1-207ENST00000406548 NEK11Q8NG66 645 aa20.74■□□□□ 0.91
EWSR1-207ENST00000406548 OR8K1Q8NGG5 319 aa20.74■□□□□ 0.91
EWSR1-207ENST00000406548 ANKS1AQ92625 1134 aa20.74■□□□□ 0.91
EWSR1-207ENST00000406548 DNAJC7Q99615 494 aa20.74■□□□□ 0.91
EWSR1-207ENST00000406548 RHOXF2BP0C7M4 288 aa20.74■□□□□ 0.91
EWSR1-207ENST00000406548 GNAQP50148 359 aa20.74■□□□□ 0.91
EWSR1-207ENST00000406548 TRIM47Q96LD4 638 aa20.74■□□□□ 0.91
EWSR1-207ENST00000406548 RHOXF2Q9BQY4 288 aa20.74■□□□□ 0.91
EWSR1-207ENST00000406548 MAD2L2Q9UI95 211 aa20.74■□□□□ 0.91
EWSR1-207ENST00000406548 MYO6Q9UM54 1294 aa20.74■□□□□ 0.91
EWSR1-207ENST00000406548 PSMA7O14818 248 aa20.73■□□□□ 0.91
EWSR1-207ENST00000406548 RHOBTB3O94955 611 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms