RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 ECM2O94769 699 aaPredicted RBP10.53□□□□□ -0.72
CSMD1-202ENST00000400186 DCAF5Q96JK2 942 aa10.53□□□□□ -0.72
CSMD1-202ENST00000400186 TRPC6Q9Y210 931 aa10.53□□□□□ -0.72
CSMD1-202ENST00000400186 PARP3Q9Y6F1 533 aa10.53□□□□□ -0.72
CSMD1-202ENST00000400186 YTHDC2Q9H6S0 1430 aaKnown RBP10.53□□□□□ -0.72
CSMD1-202ENST00000400186 TNRQ92752 1358 aa10.53□□□□□ -0.72
CSMD1-202ENST00000400186 LRGUKQ96M69 825 aa10.52□□□□□ -0.72
CSMD1-202ENST00000400186 PDCD2Q16342 344 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-202ENST00000400186 NOSTRINQ8IVI9 506 aa10.52□□□□□ -0.73
CSMD1-202ENST00000400186 LRRC8AQ8IWT6 810 aa10.52□□□□□ -0.73
CSMD1-202ENST00000400186 METTL22Q9BUU2 404 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-202ENST00000400186 ST7Q9NRC1 585 aa10.52□□□□□ -0.73
CSMD1-202ENST00000400186 ZNF277Q9NRM2 450 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-202ENST00000400186 C1orf112Q9NSG2 853 aa10.52□□□□□ -0.73
CSMD1-202ENST00000400186 COL17A1Q9UMD9 1497 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-202ENST00000400186 A0A1W2PP64 1363 aa10.52□□□□□ -0.73
CSMD1-202ENST00000400186 GUCY2DQ02846 1103 aa10.52□□□□□ -0.73
CSMD1-202ENST00000400186 NLRP7Q8WX94 980 aa10.52□□□□□ -0.73
CSMD1-202ENST00000400186 GPATCH8Q9UKJ3 1502 aaKnown RBP10.52□□□□□ -0.73
CSMD1-202ENST00000400186 UHRF1BP1LA0JNW5 1464 aa10.52□□□□□ -0.73
CSMD1-202ENST00000400186 MYO5CQ9NQX4 1742 aa10.52□□□□□ -0.73
CSMD1-202ENST00000400186 DNM2P50570 870 aa10.52□□□□□ -0.73
CSMD1-202ENST00000400186 ADALQ6DHV7 355 aa10.52□□□□□ -0.73
CSMD1-202ENST00000400186 STAMQ92783 540 aa10.52□□□□□ -0.73
CSMD1-202ENST00000400186 IWS1Q96ST2 819 aa10.52□□□□□ -0.73
CSMD1-202ENST00000400186 RRP15Q9Y3B9 282 aaKnown RBP10.52□□□□□ -0.73
CSMD1-202ENST00000400186 DNMT1P26358 1616 aaKnown RBP10.52□□□□□ -0.73
CSMD1-202ENST00000400186 GOLGA8QA0A0J9YX86 632 aa10.52□□□□□ -0.73
CSMD1-202ENST00000400186 GOLGA8OA6NCC3 632 aa10.52□□□□□ -0.73
CSMD1-202ENST00000400186 GOLGA8NF8WBI6 632 aa10.52□□□□□ -0.73
CSMD1-202ENST00000400186 BUB1O43683 1085 aa10.52□□□□□ -0.73
CSMD1-202ENST00000400186 IL9RQ01113 521 aa10.52□□□□□ -0.73
CSMD1-202ENST00000400186 CAPN12Q6ZSI9 719 aa10.52□□□□□ -0.73
CSMD1-202ENST00000400186 KIF11P52732 1056 aa10.51□□□□□ -0.73
CSMD1-202ENST00000400186 DMTNQ08495 405 aa10.51□□□□□ -0.73
CSMD1-202ENST00000400186 RCN2Q14257 317 aa10.51□□□□□ -0.73
CSMD1-202ENST00000400186 KBTBD3Q8NAB2 608 aa10.51□□□□□ -0.73
CSMD1-202ENST00000400186 TXLNGQ9NUQ3 528 aa10.51□□□□□ -0.73
CSMD1-202ENST00000400186 TCHHQ07283 1943 aa10.51□□□□□ -0.73
CSMD1-202ENST00000400186 GPHNQ9NQX3 736 aaPredicted RBP10.51□□□□□ -0.73
CSMD1-202ENST00000400186 PSDA5PKW4 1024 aaPredicted RBP10.51□□□□□ -0.73
CSMD1-202ENST00000400186 TRIM37O94972 964 aa10.51□□□□□ -0.73
CSMD1-202ENST00000400186 PDE6CP51160 858 aa10.51□□□□□ -0.73
CSMD1-202ENST00000400186 APBA1Q02410 837 aa10.51□□□□□ -0.73
CSMD1-202ENST00000400186 KMT5BQ4FZB7 885 aa10.51□□□□□ -0.73
CSMD1-202ENST00000400186 TIMM10P62072 90 aa10.51□□□□□ -0.73
CSMD1-202ENST00000400186 KCTD16Q68DU8 428 aa10.51□□□□□ -0.73
CSMD1-202ENST00000400186 ARMCX3Q9UH62 379 aaPredicted RBP10.51□□□□□ -0.73
CSMD1-202ENST00000400186 TCP1P17987 556 aaKnown RBP10.51□□□□□ -0.73
CSMD1-202ENST00000400186 MYOCDQ8IZQ8 938 aa10.51□□□□□ -0.73
CSMD1-202ENST00000400186 TEKT1Q969V4 418 aa10.51□□□□□ -0.73
CSMD1-202ENST00000400186 CNTRLQ7Z7A1 2325 aa10.51□□□□□ -0.73
CSMD1-202ENST00000400186 SCYL3Q8IZE3 742 aa10.51□□□□□ -0.73
CSMD1-202ENST00000400186 PDCD7Q8N8D1 485 aaKnown RBP10.51□□□□□ -0.73
CSMD1-202ENST00000400186 TSPOAP1O95153 1857 aa10.51□□□□□ -0.73
CSMD1-202ENST00000400186 SAT1P21673 171 aa10.51□□□□□ -0.73
CSMD1-202ENST00000400186 BBOF1Q8ND07 529 aa10.51□□□□□ -0.73
CSMD1-202ENST00000400186 ME3Q16798 604 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 EFCAB13Q8IY85 973 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 PPWD1Q96BP3 646 aaKnown RBP10.5□□□□□ -0.73
CSMD1-202ENST00000400186 HDAC11Q96DB2 347 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 DPH5Q9H2P9 285 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 PCDHB13Q9Y5F0 798 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 EHHADHQ08426 723 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 RINT1Q6NUQ1 792 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 FAM89AQ96GI7 184 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 RUNDC3BQ96NL0 473 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 SBNO1A3KN83 1393 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 SH3TC1Q8TE82 1336 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 ZBTB7BO15156 539 aaPredicted RBP10.5□□□□□ -0.73
CSMD1-202ENST00000400186 PPP2R5AQ15172 486 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 DDB1Q16531 1140 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 SPATA5Q8NB90 893 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 LRRC59Q96AG4 307 aaKnown RBP10.5□□□□□ -0.73
CSMD1-202ENST00000400186 TTC4O95801 387 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 DCLK2Q8N568 766 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 MAST3O60307 1309 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 ETF1P62495 437 aaKnown RBP10.5□□□□□ -0.73
CSMD1-202ENST00000400186 TMTC3Q6ZXV5 915 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 PDZD4Q76G19 769 aaPredicted RBP10.5□□□□□ -0.73
CSMD1-202ENST00000400186 TRIM56Q9BRZ2 755 aaKnown RBP10.5□□□□□ -0.73
CSMD1-202ENST00000400186 ZMYM6O95789 1325 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 APOEP02649 317 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 YARSP54577 528 aaKnown RBP10.5□□□□□ -0.73
CSMD1-202ENST00000400186 ESRRGP62508 458 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 DMP1Q13316 513 aaPredicted RBP10.5□□□□□ -0.73
CSMD1-202ENST00000400186 MRFAP1L1Q96HT8 127 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 KCNG1Q9UIX4 513 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 ESYT2A0FGR8 921 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 E7EWF7 191 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 RNMTO43148 476 aaKnown RBP10.5□□□□□ -0.73
CSMD1-202ENST00000400186 BIRC2Q13490 618 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 DBNDD2Q9BQY9 259 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 GNPATO15228 680 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 ANKRD20A4Q4UJ75 823 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 ANKRD20A8PQ5CZ79 823 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 ANKRD20A2Q5SQ80 823 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 ANKRD20A1Q5TYW2 823 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 PLBD2Q8NHP8 589 aa10.5□□□□□ -0.73
CSMD1-202ENST00000400186 IPO11Q9UI26 975 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms